Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1067
         (642 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT012460-1|AAS93731.1|  359|Drosophila melanogaster RE51612p pro...   107   1e-23
AY128451-1|AAM75044.1|  360|Drosophila melanogaster LD44814p pro...   107   1e-23
AE014297-852|AAF54319.2|  345|Drosophila melanogaster CG11980-PA...   107   1e-23
AE014297-851|AAN13405.1|  358|Drosophila melanogaster CG11980-PB...   107   1e-23
AE014297-850|AAN13404.1|  359|Drosophila melanogaster CG11980-PC...   107   1e-23
AE014297-727|AAF54213.2| 1667|Drosophila melanogaster CG9626-PA ...    30   3.1  
AF314193-1|AAK00302.1| 3109|Drosophila melanogaster Toutatis pro...    29   5.4  
AE013599-1322|AAF58638.2| 3080|Drosophila melanogaster CG10897-P...    29   5.4  

>BT012460-1|AAS93731.1|  359|Drosophila melanogaster RE51612p
           protein.
          Length = 359

 Score =  107 bits (258), Expect = 1e-23
 Identities = 47/72 (65%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
 Frame = +2

Query: 266 IGTHDGVFHCDEVLACFMLKNLPQYKDAEIIRTRDLNKLND-CDIVVDVGSVFDHEKKRY 442
           IGTH G FHCDE++ACFMLK L +YK+AEI R+RD   L + CDI+VDVG V+DH KK Y
Sbjct: 28  IGTHSGTFHCDELVACFMLKQLDEYKNAEIFRSRDNKALKEKCDIIVDVGGVYDHAKKLY 87

Query: 443 DHHQAGFNETLS 478
           DHHQ  F ET S
Sbjct: 88  DHHQITFKETFS 99



 Score = 39.9 bits (89), Expect = 0.003
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
 Frame = +3

Query: 510 IKLSSAGLVYAYYGEDIIQQL--KEESTSLTNEDLK-*FTRSYESFI 641
           ++LSSAGLVY +YGE +IQ +  +E+   L+ E+L+  F + Y +FI
Sbjct: 112 VRLSSAGLVYCHYGERVIQSILQREKGIKLSPENLQTAFIQIYRNFI 158


>AY128451-1|AAM75044.1|  360|Drosophila melanogaster LD44814p
           protein.
          Length = 360

 Score =  107 bits (258), Expect = 1e-23
 Identities = 47/72 (65%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
 Frame = +2

Query: 266 IGTHDGVFHCDEVLACFMLKNLPQYKDAEIIRTRDLNKLND-CDIVVDVGSVFDHEKKRY 442
           IGTH G FHCDE++ACFMLK L +YK+AEI R+RD   L + CDI+VDVG V+DH KK Y
Sbjct: 29  IGTHSGTFHCDELVACFMLKQLDEYKNAEIFRSRDNKALKEKCDIIVDVGGVYDHAKKLY 88

Query: 443 DHHQAGFNETLS 478
           DHHQ  F ET S
Sbjct: 89  DHHQITFKETFS 100



 Score = 39.9 bits (89), Expect = 0.003
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
 Frame = +3

Query: 510 IKLSSAGLVYAYYGEDIIQQL--KEESTSLTNEDLK-*FTRSYESFI 641
           ++LSSAGLVY +YGE +IQ +  +E+   L+ E+L+  F + Y +FI
Sbjct: 113 VRLSSAGLVYCHYGERVIQSILQREKGIKLSPENLQTAFIQIYRNFI 159


>AE014297-852|AAF54319.2|  345|Drosophila melanogaster CG11980-PA,
           isoform A protein.
          Length = 345

 Score =  107 bits (258), Expect = 1e-23
 Identities = 47/72 (65%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
 Frame = +2

Query: 266 IGTHDGVFHCDEVLACFMLKNLPQYKDAEIIRTRDLNKLND-CDIVVDVGSVFDHEKKRY 442
           IGTH G FHCDE++ACFMLK L +YK+AEI R+RD   L + CDI+VDVG V+DH KK Y
Sbjct: 14  IGTHSGTFHCDELVACFMLKQLDEYKNAEIFRSRDNKALKEKCDIIVDVGGVYDHAKKLY 73

Query: 443 DHHQAGFNETLS 478
           DHHQ  F ET S
Sbjct: 74  DHHQITFKETFS 85



 Score = 39.9 bits (89), Expect = 0.003
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
 Frame = +3

Query: 510 IKLSSAGLVYAYYGEDIIQQL--KEESTSLTNEDLK-*FTRSYESFI 641
           ++LSSAGLVY +YGE +IQ +  +E+   L+ E+L+  F + Y +FI
Sbjct: 98  VRLSSAGLVYCHYGERVIQSILQREKGIKLSPENLQTAFIQIYRNFI 144


>AE014297-851|AAN13405.1|  358|Drosophila melanogaster CG11980-PB,
           isoform B protein.
          Length = 358

 Score =  107 bits (258), Expect = 1e-23
 Identities = 47/72 (65%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
 Frame = +2

Query: 266 IGTHDGVFHCDEVLACFMLKNLPQYKDAEIIRTRDLNKLND-CDIVVDVGSVFDHEKKRY 442
           IGTH G FHCDE++ACFMLK L +YK+AEI R+RD   L + CDI+VDVG V+DH KK Y
Sbjct: 27  IGTHSGTFHCDELVACFMLKQLDEYKNAEIFRSRDNKALKEKCDIIVDVGGVYDHAKKLY 86

Query: 443 DHHQAGFNETLS 478
           DHHQ  F ET S
Sbjct: 87  DHHQITFKETFS 98



 Score = 39.9 bits (89), Expect = 0.003
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
 Frame = +3

Query: 510 IKLSSAGLVYAYYGEDIIQQL--KEESTSLTNEDLK-*FTRSYESFI 641
           ++LSSAGLVY +YGE +IQ +  +E+   L+ E+L+  F + Y +FI
Sbjct: 111 VRLSSAGLVYCHYGERVIQSILQREKGIKLSPENLQTAFIQIYRNFI 157


>AE014297-850|AAN13404.1|  359|Drosophila melanogaster CG11980-PC,
           isoform C protein.
          Length = 359

 Score =  107 bits (258), Expect = 1e-23
 Identities = 47/72 (65%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
 Frame = +2

Query: 266 IGTHDGVFHCDEVLACFMLKNLPQYKDAEIIRTRDLNKLND-CDIVVDVGSVFDHEKKRY 442
           IGTH G FHCDE++ACFMLK L +YK+AEI R+RD   L + CDI+VDVG V+DH KK Y
Sbjct: 28  IGTHSGTFHCDELVACFMLKQLDEYKNAEIFRSRDNKALKEKCDIIVDVGGVYDHAKKLY 87

Query: 443 DHHQAGFNETLS 478
           DHHQ  F ET S
Sbjct: 88  DHHQITFKETFS 99



 Score = 39.9 bits (89), Expect = 0.003
 Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
 Frame = +3

Query: 510 IKLSSAGLVYAYYGEDIIQQL--KEESTSLTNEDLK-*FTRSYESFI 641
           ++LSSAGLVY +YGE +IQ +  +E+   L+ E+L+  F + Y +FI
Sbjct: 112 VRLSSAGLVYCHYGERVIQSILQREKGIKLSPENLQTAFIQIYRNFI 158


>AE014297-727|AAF54213.2| 1667|Drosophila melanogaster CG9626-PA
           protein.
          Length = 1667

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 371 LNKLNDCDIVVDVGSVFDHEKKRYDHHQA 457
           LN +ND   V D  ++ DHE K+YD  +A
Sbjct: 826 LNDVNDLKEVEDTDALTDHEFKKYDEPEA 854


>AF314193-1|AAK00302.1| 3109|Drosophila melanogaster Toutatis protein.
          Length = 3109

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = +2

Query: 275  HDGVFHCDEVLACFMLKNLPQYKDAEIIRTRDLNKLNDCDIVVDVGSVFDHEK 433
            ++G  +CD++     L    Q     +I+T D+ K +DC I+V   SV D  K
Sbjct: 1847 NNGSDNCDKLETGLGLGQQQQNFSQSVIKTEDVKKEDDC-IIVSTSSVDDTPK 1898


>AE013599-1322|AAF58638.2| 3080|Drosophila melanogaster CG10897-PA,
            isoform A protein.
          Length = 3080

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = +2

Query: 275  HDGVFHCDEVLACFMLKNLPQYKDAEIIRTRDLNKLNDCDIVVDVGSVFDHEK 433
            ++G  +CD++     L    Q     +I+T D+ K +DC I+V   SV D  K
Sbjct: 1847 NNGSDNCDKLETGLGLGQQQQNFSQSVIKTEDVKKEDDC-IIVSTSSVDDTPK 1898


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,877,431
Number of Sequences: 53049
Number of extensions: 481687
Number of successful extensions: 1205
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1200
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)