Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1066
(649 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751 68 7e-12
07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288 67 1e-11
05_05_0229 - 23457438-23457629,23457706-23457828,23457913-234580... 59 3e-09
03_06_0291 + 32882831-32882998,32883238-32883361,32884528-328845... 58 5e-09
07_01_0656 - 4912985-4913143,4913700-4913822,4914081-4914215 58 8e-09
03_06_0330 - 33178114-33178206,33178317-33178382,33179704-331798... 57 1e-08
05_01_0489 - 4077365-4077502,4078105-4078227,4079019-4079135,407... 55 6e-08
01_01_0474 - 3488739-3488876,3488996-3489118,3489878-3489991,349... 53 2e-07
12_01_1027 + 10529545-10529777,10530269-10530668 51 7e-07
09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974... 50 1e-06
01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774 48 5e-06
12_01_1031 - 10605581-10606088,10606360-10606420,10606448-106064... 45 5e-05
07_03_1717 - 28958309-28958581,28958678-28958842,28958944-289591... 44 1e-04
06_03_1048 + 27146475-27146652,27146739-27146804,27146880-271469... 43 2e-04
05_02_0053 - 6152204-6152329,6152817-6152981,6154698-6154883,615... 43 2e-04
10_08_0532 + 18580579-18580746,18581923-18581997,18582659-185838... 41 0.001
08_02_0497 - 17811413-17811529,17811644-17811724,17812693-178128... 41 0.001
04_04_0782 + 28038292-28038413,28038577-28038778,28039221-280392... 40 0.002
04_04_1575 + 34548774-34549109,34549979-34550185 39 0.004
05_01_0410 - 3234455-3234466,3234851-3234950,3235037-3235161,323... 38 0.007
12_02_0670 - 21700523-21700932,21701266-21701390,21701476-217016... 37 0.016
03_02_0863 - 11889492-11889761,11890257-11890421,11890518-11890637 36 0.021
05_07_0294 - 29038259-29038420,29038526-29038632,29038889-290390... 36 0.028
03_04_0011 + 16398093-16398170,16401321-16401806,16401892-164023... 35 0.048
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 35 0.048
02_04_0214 - 20976977-20977171,20977499-20977611,20978041-209781... 35 0.064
02_04_0182 + 20719782-20720033,20720502-20720605,20720693-207210... 34 0.11
09_04_0345 + 16876489-16876614,16876718-16876876,16877989-168781... 33 0.15
04_04_1248 - 32051679-32052356,32053617-32053778,32054147-320542... 33 0.15
03_04_0013 + 16436438-16436536,16437257-16437742,16437791-164378... 33 0.15
01_03_0161 + 13337265-13337297,13337880-13338017,13338211-133383... 33 0.26
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 32 0.34
04_04_0458 + 25370542-25370597,25371591-25371679,25372687-253727... 32 0.34
04_03_0975 - 21370715-21370877,21371227-21371319,21371383-213714... 32 0.34
03_06_0089 - 31565454-31565517,31565594-31565618,31565743-315659... 32 0.45
02_04_0627 + 24585712-24585845,24586415-24586503,24587039-245871... 32 0.45
02_05_0085 - 25697860-25698142,25698631-25698946,25700481-257005... 31 0.79
10_01_0164 + 1863890-1866253 31 1.0
03_06_0376 + 33479776-33479958,33481055-33481236,33481345-334814... 31 1.0
04_04_0598 - 26514226-26514545,26516080-26516302 30 1.4
04_03_0988 - 21469811-21469831,21470823-21471047,21471327-214716... 30 1.8
02_05_0792 - 31777775-31778220,31778506-31778630,31778724-317789... 30 1.8
04_04_1095 - 30839573-30839769,30839817-30839964,30840421-308409... 29 2.4
02_01_0001 - 3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,6... 29 3.2
12_02_0650 + 21514015-21514329 28 7.4
09_06_0265 + 21933913-21933993,21934108-21934404 28 7.4
>05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751
Length = 121
Score = 67.7 bits (158), Expect = 7e-12
Identities = 31/49 (63%), Positives = 35/49 (71%)
Frame = +3
Query: 102 QTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVD 248
Q E AN+ KLVV+DFTA+WC PC+ IAP F L K AVFLKVDVD
Sbjct: 26 QIEEANSAKKLVVIDFTASWCGPCRIIAPVFADLAKKHTNAVFLKVDVD 74
>07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288
Length = 122
Score = 67.3 bits (157), Expect = 1e-11
Identities = 31/63 (49%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Frame = +3
Query: 66 GLATVIQNDAHFQTEMANA--GTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKV 239
G+ N F +M A K+V++DFTA+WC PC+ IAP F + KFP AVFLKV
Sbjct: 6 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKV 65
Query: 240 DVD 248
DVD
Sbjct: 66 DVD 68
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 248 QMPDTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKV 370
++ + A V AMPTF+F ++ + D++ G L+N +
Sbjct: 69 ELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTI 109
>05_05_0229 -
23457438-23457629,23457706-23457828,23457913-23458026,
23462062-23462597,23463258-23464545
Length = 750
Score = 59.3 bits (137), Expect = 3e-09
Identities = 29/67 (43%), Positives = 40/67 (59%)
Frame = +3
Query: 69 LATVIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVD 248
L T +N + E+A G K VV+ F+A WC PC+ AP F +L K+P VF+ VDVD
Sbjct: 626 LVTDQKNWDNTMEEVAEHG-KTVVLKFSAIWCTPCRNAAPLFAELSLKYPDIVFVSVDVD 684
Query: 249 RCPIQRV 269
PI ++
Sbjct: 685 EMPITKM 691
Score = 35.5 bits (78), Expect = 0.037
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2
Query: 278 VSAMPTFIFYRNRTKIDRLEGGNTTVLENK 367
V A PTFIF +N +ID+L GGN L+ K
Sbjct: 708 VRATPTFIFMKNNEEIDKLVGGNHEDLQEK 737
>03_06_0291 +
32882831-32882998,32883238-32883361,32884528-32884576,
32884672-32884732,32884871-32884917,32885005-32885082,
32885462-32885510
Length = 191
Score = 58.4 bits (135), Expect = 5e-09
Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = +2
Query: 515 NDRG-YLASYCDEQLIINISFNQLVKLHSIKIKGPADKGPKSIKLF 649
+D G YLAS DEQL+I+I F Q+VKLHS KGP + GPK+IKLF
Sbjct: 60 DDEGLYLASDSDEQLLIHIPFMQVVKLHSALFKGPEEDGPKTIKLF 105
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 426 GHMDLITFITKSECECLNEADDHPLAQA 509
G +DL+ FI S ECLN+ H + A
Sbjct: 26 GQVDLVDFIDWSGVECLNQDPAHSIVNA 53
>07_01_0656 - 4912985-4913143,4913700-4913822,4914081-4914215
Length = 138
Score = 57.6 bits (133), Expect = 8e-09
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +3
Query: 126 TKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVD 248
TKLVV+DF+A+WC PC+ + P F+++ +F FLKVDVD
Sbjct: 43 TKLVVIDFSASWCGPCKMMEPVFKEMAGRFTDVAFLKVDVD 83
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 248 QMPDTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKVRSV 379
++ + A V AMPTF+ R ++ R+ G + LE + ++
Sbjct: 84 ELAEVARTWRVEAMPTFVLARGGEEVGRIVGADKDELEKTINTL 127
>03_06_0330 -
33178114-33178206,33178317-33178382,33179704-33179826,
33179930-33180067
Length = 139
Score = 57.2 bits (132), Expect = 1e-08
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = +3
Query: 129 KLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVD 248
KL+V+DF+ATWC PC+ I P F+ + +F AVF K+DVD
Sbjct: 45 KLIVIDFSATWCGPCRFIEPAFKDMAGRFADAVFFKIDVD 84
>05_01_0489 -
4077365-4077502,4078105-4078227,4079019-4079135,
4079243-4079263
Length = 132
Score = 54.8 bits (126), Expect = 6e-08
Identities = 21/47 (44%), Positives = 33/47 (70%)
Frame = +3
Query: 108 EMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVD 248
E AN K+VV +F+A+WC PC+ IAP + ++ +P+ +FL +DVD
Sbjct: 38 EEANKDGKIVVANFSASWCGPCRVIAPIYAEMSKTYPQLMFLTIDVD 84
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +2
Query: 257 DTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKVRSV 379
D +S+ + A PTF F +N ++D+L G N LE KV+++
Sbjct: 88 DFSSSWDIRATPTFFFIKNEKQVDKLVGANKPELEKKVQAL 128
>01_01_0474 -
3488739-3488876,3488996-3489118,3489878-3489991,
3490416-3490452,3490584-3490675,3490878-3490956,
3491640-3491734,3491858-3491991,3492560-3492833,
3493743-3494015,3494976-3495512
Length = 631
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Frame = +3
Query: 66 GLATVIQNDAHFQTEMANAGT--KLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKV 239
G VI N ++ ++A A K+V+ +F+A WC PC+ IAP + ++ +P+ +FL +
Sbjct: 521 GNVHVISNKENWDHKIAEANKDGKIVIANFSAAWCGPCRVIAPVYAEMSQTYPQFMFLTI 580
Query: 240 DVD 248
DVD
Sbjct: 581 DVD 583
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 248 QMPDTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKVRSV 379
++ D +S+ + A PTF F +N ++D+L G N LE KV ++
Sbjct: 584 ELMDFSSSWDIRATPTFFFLKNGEQVDKLVGANKPELEKKVAAL 627
>12_01_1027 + 10529545-10529777,10530269-10530668
Length = 210
Score = 51.2 bits (117), Expect = 7e-07
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = +3
Query: 129 KLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVD 248
KLVV++F A+WC P +RIAP F + +F VFLK D+D
Sbjct: 5 KLVVIEFGASWCEPSRRIAPVFAEYAKEFAGVVFLKFDID 44
>09_04_0038 -
13996505-13996836,13997047-13997077,13997307-13997420,
13997546-13997686,13997787-13997851,13997943-13998039,
13998096-13998257,13998360-13998473,14001263-14001311,
14001967-14002047,14003504-14003561,14003671-14004031,
14004129-14004213,14004320-14004591,14004712-14004914,
14005419-14005494
Length = 746
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +3
Query: 66 GLATVIQNDAHFQTEM--ANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKV 239
G I + + T++ A++ ++LVV+ FTA WC PC+ I P + L K VFLKV
Sbjct: 637 GDVIAIHSSSELDTKLKAASSLSRLVVLYFTAAWCGPCRFIGPVCKSLAEKHRNVVFLKV 696
Query: 240 DVD 248
D+D
Sbjct: 697 DID 699
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 248 QMPDTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKV 370
++ A VS++P+F F RN +ID++ G + LE KV
Sbjct: 700 ELNSVAYRWNVSSVPSFFFVRNGKEIDKVVGADKNGLERKV 740
>01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774
Length = 187
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +3
Query: 66 GLATVIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDV 245
G T + D F + +AG K+VV+D WC PC+ +AP F+++ K VFLK+D
Sbjct: 80 GQVTEVNKDT-FWPIVKSAGPKVVVLDMYTQWCGPCKVMAPKFQEMSEKDQDVVFLKLDC 138
Query: 246 DR 251
++
Sbjct: 139 NQ 140
>12_01_1031 - 10605581-10606088,10606360-10606420,10606448-10606491,
10606664-10608382,10609848-10610791
Length = 1091
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +3
Query: 114 ANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVDRCPIQRV 269
A KLVV+ FT + CP + IAP F + +F AVF+KV+VD ++ V
Sbjct: 992 AKQSHKLVVIQFTTSRCPASRYIAPAFTEYAKEFAGAVFIKVNVDSDELESV 1043
Score = 31.5 bits (68), Expect = 0.60
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 287 MPTFIFYRNRTKIDRLEGGNTTVLENKVR 373
+PTF F ++ KID++ G N +L K+R
Sbjct: 1053 VPTFFFVKDGEKIDKIPGANKELLRAKIR 1081
>07_03_1717 -
28958309-28958581,28958678-28958842,28958944-28959120,
28959315-28959539
Length = 279
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = +3
Query: 81 IQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVDR 251
I++ + NAG KLVVVDF + C C+ + P QL K P +FL+V+ ++
Sbjct: 98 IESAQDLADSLLNAGDKLVVVDFFSPGCGGCRALHPKIAQLAEKNPEVLFLQVNYEK 154
>06_03_1048 +
27146475-27146652,27146739-27146804,27146880-27146975,
27147073-27147152,27148165-27148209,27148326-27148420,
27148623-27148632
Length = 189
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 120 AGTKL-VVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVD 248
A KL V +TA WC PC+ +AP +L +++P+ KVD+D
Sbjct: 96 AAEKLPAVFYYTAVWCGPCRAMAPVISKLSSRYPKIPIYKVDID 139
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 278 VSAMPTFIFYRNRTKIDRLEGGNTTVLENKVRSV 379
+ ++PTF FY K + G N T LE+ + S+
Sbjct: 152 IFSVPTFHFYYQGRKTGEVVGANATKLESTMESL 185
>05_02_0053 -
6152204-6152329,6152817-6152981,6154698-6154883,
6155055-6155078,6155649-6155822
Length = 224
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +3
Query: 81 IQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVD 248
I + F + +AG +LV+V+F TWC C+ + P + + P +FLKV+ D
Sbjct: 92 IHSTQEFLDALRDAGDRLVIVEFYGTWCGSCRALFPRLCRTAVENPDILFLKVNFD 147
>10_08_0532 +
18580579-18580746,18581923-18581997,18582659-18583887,
18584853-18585013,18585272-18585279,18587737-18588768
Length = 890
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 248 QMPDTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKV 370
+ P+ + A GV+A+P F+F + +D LEG N L NKV
Sbjct: 61 EQPEISEAYGVTAVPYFVFLKEGKTVDTLEGANPASLANKV 101
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +3
Query: 69 LATVIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVD 248
+A V + + + E A G + V F A WC +++ F L F AVFL+V+ +
Sbjct: 1 MAAVREVGSKAELEAAAGGARAAAVHFWAAWCEASKQMDEVFAHLAVDFSHAVFLRVEAE 60
Query: 249 RCP 257
P
Sbjct: 61 EQP 63
>08_02_0497 -
17811413-17811529,17811644-17811724,17812693-17812815,
17812945-17813193
Length = 189
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 135 VVVDFTATWCPPCQRIAPFFEQLPAKFP-RAVFLKVDVD 248
++VDF ATWC PC +A E L ++ A+F+KVD D
Sbjct: 103 LIVDFYATWCGPCVLMAQDIEMLAVEYENNALFVKVDTD 141
>04_04_0782 +
28038292-28038413,28038577-28038778,28039221-28039246,
28039750-28039969
Length = 189
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 138 VVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVDRCP 257
V+++ A+WC C +I P F + +F F+ D+D CP
Sbjct: 110 VINYGASWCRVCSQILPPFCRFSNEFKNLTFIYADIDECP 149
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 248 QMPDTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKVRSVLWL 388
+ P+T Q + PTF FYR+ K+D + G E ++ LWL
Sbjct: 147 ECPETT--QNIRYTPTFHFYRDGEKVDEMLGTG----EERLHDRLWL 187
>04_04_1575 + 34548774-34549109,34549979-34550185
Length = 180
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 66 GLATVIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFP-RAVFLKVD 242
G A + F+ E+ + V+VDF A WC PC+ IAP + ++ R +K+D
Sbjct: 66 GAAVRFIGQSEFEAEVLQSDLP-VLVDFVADWCGPCRLIAPVVDWAAEEYEGRLKIVKID 124
Query: 243 VDRCP 257
D P
Sbjct: 125 HDANP 129
>05_01_0410 -
3234455-3234466,3234851-3234950,3235037-3235161,
3235244-3235400,3235644-3235735,3235828-3235855,
3235949-3236066,3236411-3236466,3236556-3236653,
3236864-3236948,3237428-3237600
Length = 347
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +3
Query: 129 KLVVVDFTATWCPPCQRIAPFFEQLPAKFPRA---VFLKVDVD 248
+ +V+F A WC C+++AP +E+L A F +A + KVD D
Sbjct: 48 RAALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKVDCD 90
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +3
Query: 126 TKLVVVDFTATWCPPCQRIAPFFEQLPAKFPR---AVFLKVDVDR 251
TK V+V+F A WC C+ +AP +E+L + + + V +D D+
Sbjct: 166 TKDVLVEFYAPWCGHCKHLAPIYEKLASVYKQDEGVVIANLDADK 210
>12_02_0670 -
21700523-21700932,21701266-21701390,21701476-21701651,
21702937-21703128
Length = 300
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 147 FTATWCPPCQRIAPFFEQLPAKFPRAVFLKVD 242
F A+WCP QR+ P F+ L + FPR L V+
Sbjct: 85 FYASWCPFSQRMRPVFDDLSSMFPRIKHLAVE 116
>03_02_0863 - 11889492-11889761,11890257-11890421,11890518-11890637
Length = 184
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 111 MANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVD 248
+ NAG LV+VDF + C C+ + P Q+ + P +FL+V+ +
Sbjct: 14 LTNAGDNLVIVDFFSPGCGGCRALHPKICQIAEQNPDVLFLQVNYE 59
>05_07_0294 -
29038259-29038420,29038526-29038632,29038889-29039093,
29039173-29039536,29039588-29039772,29039879-29040080,
29040697-29041589
Length = 705
Score = 35.9 bits (79), Expect = 0.028
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +3
Query: 138 VVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVDRCPI 260
VV F AT CQ+I P + L ++ P FLKV+VD P+
Sbjct: 620 VVYFMATMNQQCQQITPSVDSLCSECPSVNFLKVNVDESPM 660
>03_04_0011 +
16398093-16398170,16401321-16401806,16401892-16402380,
16402810-16403466
Length = 569
Score = 35.1 bits (77), Expect = 0.048
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +3
Query: 78 VIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAP 188
+++N A Q ++++ V + F+A+WCPPC+R P
Sbjct: 19 LLRNSAD-QVKISSIEASTVALYFSASWCPPCRRFTP 54
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 35.1 bits (77), Expect = 0.048
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 102 QTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVDRCP 257
Q +MA + + V+ F C +I+PF L ++P FLKVD+ P
Sbjct: 578 QFQMATSLPGVSVIHFMTPLNQQCCKISPFVNTLCTRYPSISFLKVDISESP 629
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 248 QMPDTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKVR 373
+ P A A+ V +PTF Y+N T++ + + +LE VR
Sbjct: 627 ESPAVARAENVRTVPTFKIYKNGTRVKEMICPSLQLLEYSVR 668
>02_04_0214 -
20976977-20977171,20977499-20977611,20978041-20978158,
20978585-20978701,20978836-20978973,20979193-20979318,
20979827-20980015,20980539-20980863,20980977-20981134
Length = 492
Score = 34.7 bits (76), Expect = 0.064
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = +3
Query: 117 NAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVDRCPIQRVLRASVQCPH 296
N+G K V+++F A WC CQ++AP E++ AV LK D D I ++ + P
Sbjct: 386 NSG-KNVLLEFYAPWCGHCQKLAPILEEV------AVSLKDDED-VVIAKMDGTANDVPS 437
Query: 297 SFSTETGP 320
F+ E P
Sbjct: 438 DFAVEGYP 445
Score = 34.3 bits (75), Expect = 0.085
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +3
Query: 78 VIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKF----PRAVFLKVD 242
V+ DA TE+ A +VV+F A WC C ++AP +E A P V KVD
Sbjct: 27 VLTLDAGNFTEVVGAHD-FIVVEFYAPWCGHCNQLAPEYEAAAAALRSHDPPVVLAKVD 84
>02_04_0182 +
20719782-20720033,20720502-20720605,20720693-20721066,
20721302-20721609,20721853-20722092
Length = 425
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 87 NDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQ 200
+D +F + AG L+ VDF A WC C+R+AP ++
Sbjct: 52 DDGNFDAAVRAAG--LLFVDFYAPWCGHCKRLAPQLDE 87
>09_04_0345 +
16876489-16876614,16876718-16876876,16877989-16878102,
16878701-16878882,16879142-16879241,16879597-16879638,
16879818-16879994,16880084-16880175,16880633-16880779,
16880832-16881036
Length = 447
Score = 33.5 bits (73), Expect = 0.15
Identities = 13/38 (34%), Positives = 26/38 (68%)
Frame = +3
Query: 87 NDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQ 200
N +F++++ N+ +V+V+F A WC CQ++ P +E+
Sbjct: 35 NPNNFKSKVLNSNG-VVLVEFFAPWCGHCQQLTPIWEK 71
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 72 ATVIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFL-KVDVD 248
A++ N +F ++ L +V+F A WC C+++AP +++ V L VD D
Sbjct: 166 ASIELNSQNFD-KLVTKSKDLWIVEFFAPWCGHCKKLAPEWKKAAKNLKGQVKLGHVDCD 224
>04_04_1248 -
32051679-32052356,32053617-32053778,32054147-32054269,
32054686-32054793
Length = 356
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 99 FQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVD 248
F + +N G VV F A+WC + FE+L P +FL VDVD
Sbjct: 26 FVNQASNEGHP-VVAHFGASWCVTSLSMNYKFEELAQTHPEILFLYVDVD 74
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 263 ASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKV 370
+S GV AMPTF +++ ++++ G N ++ V
Sbjct: 80 SSKLGVKAMPTFFLIKDKEVVNKIVGANPDEVKKMV 115
>03_04_0013 +
16436438-16436536,16437257-16437742,16437791-16437826,
16437835-16438323,16438951-16439622
Length = 593
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +3
Query: 78 VIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAP 188
+++N A + ++++ V + F+A+WCPPC+R P
Sbjct: 26 LLRNSAD-KVKISSIKASTVALYFSASWCPPCRRFTP 61
Score = 30.7 bits (66), Expect = 1.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 129 KLVVVDFTATWCPPCQRIAP 188
K V++ F+A WCPPC+ P
Sbjct: 379 KTVLLYFSAKWCPPCRAFLP 398
>01_03_0161 +
13337265-13337297,13337880-13338017,13338211-13338308,
13338395-13338450,13338664-13338781,13338889-13338916,
13339021-13339112,13339321-13339477,13339569-13339693,
13339785-13339884,13339991-13340059
Length = 337
Score = 32.7 bits (71), Expect = 0.26
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 129 KLVVVDFTATWCPPCQRIAPFFEQLPAKF 215
K ++V+F A WC C+ +AP +E+L + +
Sbjct: 138 KDILVEFYAPWCGHCKHLAPIYEKLASVY 166
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Frame = +3
Query: 162 CPPCQRIAPFFEQLPAKFPRA--VFL-KVDVD 248
C C+++AP +E+L A F +A VF+ KVD D
Sbjct: 30 CGHCKKLAPEYEKLGASFKKAKSVFIAKVDCD 61
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +3
Query: 135 VVVDFTATWCPPCQRIAPFFE----QLPAKFPRAVFLKVDVD 248
+VV+F A WC C+++AP +E +L P V KVD +
Sbjct: 60 MVVEFYAPWCGHCKKLAPEYEKAAQELSKHDPPIVLAKVDAN 101
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 129 KLVVVDFTATWCPPCQRIAPFFEQ 200
K V+V+F A WC C+++AP ++
Sbjct: 403 KNVLVEFYAPWCGHCKKLAPILDE 426
>04_04_0458 +
25370542-25370597,25371591-25371679,25372687-25372785,
25372960-25373054
Length = 112
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 138 VVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVDRCPIQRVL 272
VV ++ ++CP C R+ FEQL A F +A+ L + D +Q L
Sbjct: 15 VVVYSKSYCPFCVRVKKLFEQLGATF-KAIELDGESDGSELQSAL 58
>04_03_0975 -
21370715-21370877,21371227-21371319,21371383-21371466,
21371745-21371869,21372360-21372600,21373640-21373734
Length = 266
Score = 32.3 bits (70), Expect = 0.34
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 120 AGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFP-RAVFLKVDVDRCP 257
AG V+++F A+WC PC+ + +++ ++ R K+D D P
Sbjct: 31 AGDIPVLIEFWASWCGPCRMVHRIVDEIAQEYAGRIKCYKLDTDDYP 77
>03_06_0089 -
31565454-31565517,31565594-31565618,31565743-31565927,
31566302-31566405,31567148-31567366,31567721-31567903
Length = 259
Score = 31.9 bits (69), Expect = 0.45
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +3
Query: 27 VYQHFRLNLF*TMGLATVIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLP 206
++ + RL+ F + L + N ++ ++N K VV+F A WC C+ +AP ++
Sbjct: 109 LFAYQRLD-FGGVSLKDLAANATPYEEALSNG--KPTVVEFYADWCEVCRELAPDVYKVE 165
Query: 207 AKF-PRAVFLKVDVD 248
++ R F+ ++VD
Sbjct: 166 QQYKDRVNFVMLNVD 180
>02_04_0627 +
24585712-24585845,24586415-24586503,24587039-24587137,
24587326-24587405
Length = 133
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 138 VVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVDRCPIQRVL 272
VV F+ T+CP C R+ +L A + +AV L V+ D +Q L
Sbjct: 41 VVVFSKTYCPFCARVKRLLAELAASY-KAVELDVESDGSELQSAL 84
>02_05_0085 -
25697860-25698142,25698631-25698946,25700481-25700518,
25700955-25701036,25701815-25702016
Length = 306
Score = 31.1 bits (67), Expect = 0.79
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 135 VVVDFTATWCPPCQRIAPFFEQLPAKF 215
V+V+F A+WC PC+ I P +L ++
Sbjct: 127 VLVEFWASWCGPCKMIDPVIGKLSKEY 153
>10_01_0164 + 1863890-1866253
Length = 787
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +3
Query: 99 FQTEMANAGTKLV-VVDFTA--TWCPPCQRIAPFFEQLPAKFPRAVFLKVDVDRCPIQRV 269
F M N GTKLV +V+ T+ TW PPC+ I L K P A +L+ + + +Q++
Sbjct: 248 FLLNMDNTGTKLVNMVEVTSLQTWAPPCRVICK--GSLVKKHP-ATWLEFEWKQHDVQQI 304
>03_06_0376 +
33479776-33479958,33481055-33481236,33481345-33481469,
33481858-33482057,33482629-33482762,33483095-33483158,
33483764-33484441,33484723-33484839
Length = 560
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 147 FTATWCPPCQRIAPFFEQLPAKFPRAVFLKVD 242
F A WCP + P FE L FP+ V+
Sbjct: 84 FYAAWCPFSSKFRPIFEALSTMFPQIYHFTVE 115
>04_04_0598 - 26514226-26514545,26516080-26516302
Length = 180
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 135 VVVDFTATWCPPCQRIAPFFEQLPAKFP-RAVFLKVDVDRCP 257
V+V + ATWC PC+ I P +L ++ + K++ D P
Sbjct: 94 VLVGYWATWCGPCKMIDPVVGKLSKEYEGKLKCYKLNTDENP 135
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 254 PDTASAQGVSAMPTFIFYRNRTKIDRLEG 340
PD AS GV ++PT + ++N K D + G
Sbjct: 135 PDIASQYGVRSIPTMMIFKNGEKKDAVIG 163
>04_03_0988 -
21469811-21469831,21470823-21471047,21471327-21471634,
21471864-21472234,21472327-21472430,21473086-21473325
Length = 422
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 108 EMANAGTKLVVVDFTATWCPPCQRIAPFFEQ 200
E A + VDF A WC C+R+AP ++
Sbjct: 53 EAALGAIDYLFVDFYAPWCGHCKRLAPELDE 83
>02_05_0792 -
31777775-31778220,31778506-31778630,31778724-31778911,
31779716-31779892
Length = 311
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 135 VVVDFTATWCPPCQRIAPFFEQLPAKFP 218
+ V F A+WCP Q P FE L + FP
Sbjct: 80 IAVLFYASWCPFSQECKPNFEILASLFP 107
>04_04_1095 -
30839573-30839769,30839817-30839964,30840421-30840903,
30841419-30841910,30842267-30842362
Length = 471
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +3
Query: 66 GLATVIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAK 212
G+ T++ N + +++ K + + F+A WC PC+ P Q+ K
Sbjct: 22 GVGTLLSNGGK-EIPLSSIEGKRICLFFSAHWCRPCRNFTPKLLQIYRK 69
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = +3
Query: 78 VIQNDAHFQTEMANAGTKLVVVDFTATWCPPC----QRIAPFFEQLPAKFP---RAVFLK 236
VI D +T +++ K + + F A WCPPC +++ +++L A P + +F+
Sbjct: 189 VISADG-IKTPISDLNGKTIGLYFGAHWCPPCRAFTKQLREAYDELKALRPGNFQVIFIS 247
Query: 237 VDVDRCPIQRVLRA 278
+D + Q L A
Sbjct: 248 MDRNEEEFQASLSA 261
>02_01_0001 -
3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,
6419-6493,6619-6705,6873-6953,7021-7163,7262-7430,
7538-7667,7753-8255
Length = 577
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 120 AGTKLVVVDFTATWCPPCQRIAP 188
A + V+V+F A WC CQ +AP
Sbjct: 88 ASHRHVMVEFYAPWCAHCQALAP 110
>12_02_0650 + 21514015-21514329
Length = 104
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 111 MANAGTKLVVVDFTATWCPPCQRIAPFFEQL 203
+A T+ VV FTA+ CP C + F L
Sbjct: 4 VAKLSTEKAVVIFTASNCPMCHTVVSLFSDL 34
>09_06_0265 + 21933913-21933993,21934108-21934404
Length = 125
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 66 GLATVIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPA--KFPRAVFLKV 239
G I++ F + KLVV+ F A W P + + P E++ + K A +
Sbjct: 5 GAVKNIESWDEFTKHFVKSEDKLVVLVFMAPWSEPWKLMRPAVEKMASGLKSEEAEVCTI 64
Query: 240 DVDRC-PIQRVLR 275
VDR + R+LR
Sbjct: 65 SVDRFNTLGRLLR 77
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,444,518
Number of Sequences: 37544
Number of extensions: 287353
Number of successful extensions: 704
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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