Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1066
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-l... 98 4e-21
AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-l... 98 4e-21
AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical... 98 4e-21
AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical ... 68 7e-12
AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical ... 57 1e-08
Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical pr... 55 5e-08
AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical ... 55 5e-08
U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical pr... 52 5e-07
U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical pr... 52 5e-07
DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein. 52 5e-07
DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein. 52 5e-07
AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein. 41 7e-04
U21324-7|AAA62566.1| 265|Caenorhabditis elegans Hypothetical pr... 39 0.003
U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfi... 38 0.006
U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfi... 38 0.006
U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfi... 38 0.006
AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical... 38 0.006
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 38 0.006
Z48795-2|CAA88726.1| 149|Caenorhabditis elegans Hypothetical pr... 38 0.008
AC024806-1|AAF59524.1| 149|Caenorhabditis elegans Hypothetical ... 37 0.014
AC084197-8|AAG23476.1| 228|Caenorhabditis elegans Hypothetical ... 36 0.019
Z71178-7|CAA94881.1| 119|Caenorhabditis elegans Hypothetical pr... 36 0.025
U70853-9|AAB09142.2| 158|Caenorhabditis elegans Hypothetical pr... 34 0.076
L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical pr... 33 0.17
AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein. 33 0.17
U80029-11|AAB37590.1| 155|Caenorhabditis elegans Hypothetical p... 33 0.23
U70849-4|AAK67231.1| 179|Caenorhabditis elegans Hypothetical pr... 32 0.30
U23511-9|AAC46796.1| 140|Caenorhabditis elegans Hypothetical pr... 31 0.53
U23511-8|AAU20849.1| 167|Caenorhabditis elegans Hypothetical pr... 31 0.53
Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical pr... 30 1.2
U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulph... 30 1.2
U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily ass... 30 1.2
Z69637-1|CAA93467.1| 601|Caenorhabditis elegans Hypothetical pr... 30 1.6
U41012-4|AAA82296.2| 413|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical ... 29 2.8
AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical ... 29 2.8
AF068720-8|AAM15583.1| 142|Caenorhabditis elegans Hypothetical ... 29 2.8
U97402-2|AAB63409.2| 393|Caenorhabditis elegans Hypothetical pr... 29 3.8
U97402-1|ABB51193.1| 393|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF038618-3|AAB92073.1| 572|Caenorhabditis elegans Hypothetical ... 28 5.0
AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical ... 28 5.0
Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical pr... 28 6.6
U80848-2|AAB37989.1| 574|Caenorhabditis elegans Hypothetical pr... 28 6.6
U80027-5|AAC48123.1| 122|Caenorhabditis elegans Hypothetical pr... 28 6.6
U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily ass... 28 6.6
U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily ass... 28 6.6
Z82068-3|CAB04900.2| 1071|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z81080-3|CAD30439.1| 608|Caenorhabditis elegans Hypothetical pr... 27 8.7
U13876-14|AAA21168.1| 2500|Caenorhabditis elegans Not-like (yeas... 27 8.7
>AF143900-1|AAF66677.1| 284|Caenorhabditis elegans thioredoxin-like
protein protein.
Length = 284
Score = 98.3 bits (234), Expect = 4e-21
Identities = 54/142 (38%), Positives = 78/142 (54%)
Frame = +3
Query: 81 IQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVDRCPI 260
+++D F+ +++ AG K V+VDFTA WC PC+ IAP FE L ++ AVFLKVDV+ C
Sbjct: 6 VKDDEDFRNQLSLAGLKSVIVDFTAVWCGPCKMIAPTFEALSNQYLGAVFLKVDVEICEK 65
Query: 261 QRVLRASVQCPHSFSTETGPKSTD*KEAILLY*KTKLDQYYGSDVAEEDEDNTVAGHMDL 440
P ++G + K A +T + +Y + A D+ VAG MDL
Sbjct: 66 TSSENGVNSMPTFMVFQSGVRVEQMKGADAKALETMVKKYADNSAA----DSLVAGQMDL 121
Query: 441 ITFITKSECECLNEADDHPLAQ 506
+ K + ECLNE+DD PL +
Sbjct: 122 TPLVDKKQMECLNESDDTPLGR 143
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = +2
Query: 530 LASYCDEQLIINISFNQLVKLHSIKIKGPADKGPKSIKLF 649
L S CDEQLII++ FNQ VK+HSI IKG +D+ PK +K+F
Sbjct: 151 LVSDCDEQLIISLPFNQPVKVHSILIKGVSDRAPKKVKVF 190
>AF143405-1|AAF66636.1| 284|Caenorhabditis elegans thioredoxin-like
protein TXL protein.
Length = 284
Score = 98.3 bits (234), Expect = 4e-21
Identities = 54/142 (38%), Positives = 78/142 (54%)
Frame = +3
Query: 81 IQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVDRCPI 260
+++D F+ +++ AG K V+VDFTA WC PC+ IAP FE L ++ AVFLKVDV+ C
Sbjct: 6 VKDDEDFRNQLSLAGLKSVIVDFTAVWCGPCKMIAPTFEALSNQYLGAVFLKVDVEICEK 65
Query: 261 QRVLRASVQCPHSFSTETGPKSTD*KEAILLY*KTKLDQYYGSDVAEEDEDNTVAGHMDL 440
P ++G + K A +T + +Y + A D+ VAG MDL
Sbjct: 66 TSSENGVNSMPTFMVFQSGVRVEQMKGADAKALETMVKKYADNSAA----DSLVAGQMDL 121
Query: 441 ITFITKSECECLNEADDHPLAQ 506
+ K + ECLNE+DD PL +
Sbjct: 122 TPLVDKKQMECLNESDDTPLGR 143
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = +2
Query: 530 LASYCDEQLIINISFNQLVKLHSIKIKGPADKGPKSIKLF 649
L S CDEQLII++ FNQ VK+HSI IKG +D+ PK +K+F
Sbjct: 151 LVSDCDEQLIISLPFNQPVKVHSILIKGVSDRAPKKVKVF 190
>AC024810-17|AAF60759.1| 284|Caenorhabditis elegans Hypothetical
protein Y54E10A.3 protein.
Length = 284
Score = 98.3 bits (234), Expect = 4e-21
Identities = 54/142 (38%), Positives = 78/142 (54%)
Frame = +3
Query: 81 IQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVDRCPI 260
+++D F+ +++ AG K V+VDFTA WC PC+ IAP FE L ++ AVFLKVDV+ C
Sbjct: 6 VKDDEDFRNQLSLAGLKSVIVDFTAVWCGPCKMIAPTFEALSNQYLGAVFLKVDVEICEK 65
Query: 261 QRVLRASVQCPHSFSTETGPKSTD*KEAILLY*KTKLDQYYGSDVAEEDEDNTVAGHMDL 440
P ++G + K A +T + +Y + A D+ VAG MDL
Sbjct: 66 TSSENGVNSMPTFMVFQSGVRVEQMKGADAKALETMVKKYADNSAA----DSLVAGQMDL 121
Query: 441 ITFITKSECECLNEADDHPLAQ 506
+ K + ECLNE+DD PL +
Sbjct: 122 TPLVDKKQMECLNESDDTPLGR 143
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = +2
Query: 530 LASYCDEQLIINISFNQLVKLHSIKIKGPADKGPKSIKLF 649
L S CDEQLII++ FNQ VK+HSI IKG +D+ PK +K+F
Sbjct: 151 LVSDCDEQLIISLPFNQPVKVHSILIKGVSDRAPKKVKVF 190
>AC024827-2|AAF60805.2| 254|Caenorhabditis elegans Hypothetical
protein Y55F3AR.2 protein.
Length = 254
Score = 67.7 bits (158), Expect = 7e-12
Identities = 29/59 (49%), Positives = 37/59 (62%)
Frame = +3
Query: 78 VIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVDRC 254
V+ D+ F + + K V VDFTA+WC PCQ IAP F L ++ +VFLKVDVD C
Sbjct: 5 VVNGDSDFDRKFSAGNGKAVFVDFTASWCGPCQYIAPIFSDLANQYKGSVFLKVDVDEC 63
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 260 TASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKV 370
TA+ GV+AMPTFI + N K ++G + + L + V
Sbjct: 66 TAATYGVNAMPTFIAFVNGQKKATIQGADESGLRSMV 102
>AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical
protein Y44E3A.3 protein.
Length = 107
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +3
Query: 69 LATVIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKF-PRAVFLKVDV 245
++ I++D F+T A T+ V++ FTA+WC PCQ I P E+L A+ R LK+DV
Sbjct: 1 MSIAIKDDDEFKTIFAEKKTQPVILFFTASWCGPCQMIKPRVEELAAEHKDRLSILKIDV 60
Query: 246 DRC 254
D C
Sbjct: 61 DEC 63
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 278 VSAMPTFIFYRNRTKIDRLEGGNTTVLENKVRSVL 382
+++MPTF+ + K D+ G N T E V++ L
Sbjct: 72 INSMPTFLLIVDGIKKDQFSGANNTKFEEMVKAAL 106
>Z81552-7|CAB04487.2| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 54.8 bits (126), Expect = 5e-08
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Frame = +3
Query: 129 KLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKV--DVDRCPIQR 266
+L+++DF A WC PC+ I+P FEQ A++ A FLKV DV R +QR
Sbjct: 23 RLIIIDFFANWCGPCRMISPIFEQFSAEYGNATFLKVNCDVARDIVQR 70
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 257 DTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKVR 373
D +SAMPTFIF +NR ++D + G N + K+R
Sbjct: 66 DIVQRYNISAMPTFIFLKNRQQVDMVRGANQQAIAEKIR 104
>AL117201-5|CAB57916.1| 606|Caenorhabditis elegans Hypothetical
protein F56G4.5 protein.
Length = 606
Score = 54.8 bits (126), Expect = 5e-08
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Frame = +3
Query: 129 KLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKV--DVDRCPIQR 266
+L+++DF A WC PC+ I+P FEQ A++ A FLKV DV R +QR
Sbjct: 23 RLIIIDFFANWCGPCRMISPIFEQFSAEYGNATFLKVNCDVARDIVQR 70
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 257 DTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKVR 373
D +SAMPTFIF +NR ++D + G N + K+R
Sbjct: 66 DIVQRYNISAMPTFIFLKNRQQVDMVRGANQQAIAEKIR 104
>U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical
protein B0228.5a protein.
Length = 115
Score = 51.6 bits (118), Expect = 5e-07
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +3
Query: 129 KLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVD 248
K++++DF ATWC PC+ IAP +++L +F KVDVD
Sbjct: 28 KIIILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVD 67
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = +2
Query: 257 DTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKV 370
D S V MPTFIF +N I+ LEG L KV
Sbjct: 71 DLCSKYDVKMMPTFIFTKNGDAIEALEGCVEDELRQKV 108
>U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical
protein B0228.5b protein.
Length = 114
Score = 51.6 bits (118), Expect = 5e-07
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +3
Query: 129 KLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVD 248
K++++DF ATWC PC+ IAP +++L +F KVDVD
Sbjct: 27 KIIILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVD 66
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = +2
Query: 257 DTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKV 370
D S V MPTFIF +N I+ LEG L KV
Sbjct: 70 DLCSKYDVKMMPTFIFTKNGDAIEALEGCVEDELRQKV 107
>DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein.
Length = 114
Score = 51.6 bits (118), Expect = 5e-07
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +3
Query: 129 KLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVD 248
K++++DF ATWC PC+ IAP +++L +F KVDVD
Sbjct: 27 KIIILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVD 66
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = +2
Query: 257 DTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKV 370
D S V MPTFIF +N I+ LEG L KV
Sbjct: 70 DLCSKYDVKMMPTFIFTKNGDAIEALEGCVEDELRQKV 107
>DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein.
Length = 115
Score = 51.6 bits (118), Expect = 5e-07
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +3
Query: 129 KLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVD 248
K++++DF ATWC PC+ IAP +++L +F KVDVD
Sbjct: 28 KIIILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVD 67
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = +2
Query: 257 DTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKV 370
D S V MPTFIF +N I+ LEG L KV
Sbjct: 71 DLCSKYDVKMMPTFIFTKNGDAIEALEGCVEDELRQKV 108
>AF250925-1|AAF74721.1| 542|Caenorhabditis elegans PNGase protein.
Length = 542
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 257 DTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKVR 373
D +SAMPTFIF +NR ++D + G N + K+R
Sbjct: 2 DIVQRYNISAMPTFIFLKNRQQVDMVRGANQQAIAEKIR 40
>U21324-7|AAA62566.1| 265|Caenorhabditis elegans Hypothetical
protein C35D10.10 protein.
Length = 265
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 75 TVIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKF--PRAVFLKVDVD 248
T Q + F+ N T + V+ F TW P C+ +P F +L KF P F K+D+
Sbjct: 128 TYFQGEQLFEELTRNRNT-IWVIQFFTTWSPECRHTSPVFAELSQKFTLPNMKFGKLDIG 186
Query: 249 R 251
R
Sbjct: 187 R 187
>U41542-8|AAN39682.1| 437|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform b protein.
Length = 437
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +3
Query: 108 EMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKF 215
++A TK V+V+F A WC C+++AP +++L KF
Sbjct: 319 QVARDNTKNVLVEFYAPWCGHCKQLAPTWDKLGEKF 354
Score = 29.1 bits (62), Expect = 2.8
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 123 GTKLVVVDFTATWCPPCQRIAP 188
G + ++V+F A WC C+ +AP
Sbjct: 39 GNEFILVEFYAPWCGHCKSLAP 60
>U41542-7|ABO16445.1| 371|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform c protein.
Length = 371
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +3
Query: 108 EMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKF 215
++A TK V+V+F A WC C+++AP +++L KF
Sbjct: 253 QVARDNTKNVLVEFYAPWCGHCKQLAPTWDKLGEKF 288
Score = 29.1 bits (62), Expect = 2.8
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 123 GTKLVVVDFTATWCPPCQRIAP 188
G + ++V+F A WC C+ +AP
Sbjct: 39 GNEFILVEFYAPWCGHCKSLAP 60
>U41542-6|AAK39152.1| 493|Caenorhabditis elegans Protein disulfide
isomerase protein2, isoform a protein.
Length = 493
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/36 (41%), Positives = 25/36 (69%)
Frame = +3
Query: 108 EMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKF 215
++A TK V+V+F A WC C+++AP +++L KF
Sbjct: 375 QVARDNTKNVLVEFYAPWCGHCKQLAPTWDKLGEKF 410
Score = 29.1 bits (62), Expect = 2.8
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 123 GTKLVVVDFTATWCPPCQRIAP 188
G + ++V+F A WC C+ +AP
Sbjct: 39 GNEFILVEFYAPWCGHCKSLAP 60
>AL032657-16|CAJ85780.1| 318|Caenorhabditis elegans Hypothetical
protein Y47H9C.5b protein.
Length = 318
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 138 VVDFTATWCPPCQRIAPFFEQLPAKFPRAV-FLKVDVDRCP 257
+VDF A WC C + AP ++Q+ + V F K+D D+ P
Sbjct: 221 IVDFFAPWCGHCIQFAPIYDQIAKELAGKVNFAKIDCDQWP 261
Score = 32.7 bits (71), Expect = 0.23
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 138 VVDFTATWCPPCQRIAP 188
+VDF A WC PCQ++AP
Sbjct: 103 LVDFFAPWCGPCQQLAP 119
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 138 VVDFTATWCPPCQRIAPFFEQLPAKFPRAV-FLKVDVDRCP 257
+VDF A WC C + AP ++Q+ + V F K+D D+ P
Sbjct: 691 IVDFFAPWCGHCIQFAPIYDQIAKELAGKVNFAKIDCDQWP 731
Score = 33.5 bits (73), Expect = 0.13
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 108 EMANAGTKLVVVDFTATWCPPCQRI 182
E A +G + ++D+ A WCPPC ++
Sbjct: 449 EYAISGGEFYIIDYFAPWCPPCMKL 473
Score = 32.7 bits (71), Expect = 0.23
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 138 VVDFTATWCPPCQRIAP 188
+VDF A WC PCQ++AP
Sbjct: 573 LVDFFAPWCGPCQQLAP 589
>Z48795-2|CAA88726.1| 149|Caenorhabditis elegans Hypothetical
protein R05H5.3 protein.
Length = 149
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Frame = +3
Query: 129 KLVVVDFTATWCPPCQRIAP----FFEQLPAKFPRAVFLKVDVDR 251
K+V + F+A+WCPPC++ P FF+++ K P + V DR
Sbjct: 27 KVVGLYFSASWCPPCRQFTPKLTRFFDEIRKKHPEFEVVFVSRDR 71
>AC024806-1|AAF59524.1| 149|Caenorhabditis elegans Hypothetical
protein Y52E8A.3 protein.
Length = 149
Score = 36.7 bits (81), Expect = 0.014
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 129 KLVVVDFTATWCPPCQRIAP----FFEQLPAKFPRAVFLKVDVDR 251
K++ + F+A+WCPPC+ P FFE++ P + V DR
Sbjct: 27 KIIGLYFSASWCPPCRAFTPKLKEFFEEIKKTHPEFEIIFVSRDR 71
>AC084197-8|AAG23476.1| 228|Caenorhabditis elegans Hypothetical
protein Y73B6BL.12 protein.
Length = 228
Score = 36.3 bits (80), Expect = 0.019
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 138 VVDFTATWCPPCQRIAPFFEQLPAKFPRAV-FLKVDVDRCP 257
+VDF A WC C + AP ++++ + V F K+D D+ P
Sbjct: 131 IVDFFAPWCGHCIQFAPIYDRIAKELAGKVNFAKIDCDQWP 171
>Z71178-7|CAA94881.1| 119|Caenorhabditis elegans Hypothetical
protein B0024.9 protein.
Length = 119
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 105 TEMANAGTKLVVVDFTATWCPPCQRIAPFFEQ-LPAKFPRAVFLKVDVD 248
TE + V+VDF A WC PCQ + P E+ + + + K++VD
Sbjct: 23 TEKVIQSSVPVIVDFHAEWCGPCQALGPRLEEKVNGRQGSVLLAKINVD 71
>U70853-9|AAB09142.2| 158|Caenorhabditis elegans Hypothetical
protein M01H9.1 protein.
Length = 158
Score = 34.3 bits (75), Expect = 0.076
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +3
Query: 129 KLVVVDFTATWCPPCQRIAPFFEQL 203
K+VV+ F+A+WC PC++ P ++L
Sbjct: 28 KIVVLYFSASWCGPCRQFTPIMKEL 52
>L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical
protein C14B9.2 protein.
Length = 618
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +3
Query: 120 AGTKLVVVDFTATWCPPCQRIAPFFEQLPAK 212
+ +LV+V+F A WC C+++AP +E+ K
Sbjct: 162 SNNELVLVEFYAPWCGHCKKLAPEYEKAAQK 192
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 135 VVVDFTATWCPPCQRIAPFFEQLPAK 212
V+V F A WC C+ +AP +E+ +K
Sbjct: 56 VLVKFYAPWCGHCKHLAPEYEKASSK 81
>Z92970-1|CAB07480.1| 488|Caenorhabditis elegans Hypothetical
protein H06O01.1 protein.
Length = 488
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 108 EMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPR--AVFLKVD 242
E+ K V+++F A WC C+ +AP +E+L K + + K+D
Sbjct: 374 ELIMDADKDVLIEFYAPWCGHCKSLAPKYEELAEKLNKEDVIIAKMD 420
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = +3
Query: 132 LVVVDFTATWCPPCQRIAPFFEQLPAKF----PRAVFLKVD 242
+ +V F A WC C++IAP +E+ K P +KVD
Sbjct: 39 IALVKFYAPWCGHCKKIAPEYERAAPKLASNDPPVALVKVD 79
>AB072567-1|BAB88817.1| 488|Caenorhabditis elegans ceERp57 protein.
Length = 488
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 108 EMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPR--AVFLKVD 242
E+ K V+++F A WC C+ +AP +E+L K + + K+D
Sbjct: 374 ELIMDADKDVLIEFYAPWCGHCKSLAPKYEELAEKLNKEDVIIAKMD 420
Score = 31.5 bits (68), Expect = 0.53
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = +3
Query: 132 LVVVDFTATWCPPCQRIAPFFEQLPAKF----PRAVFLKVD 242
+ +V F A WC C++IAP +E+ K P +KVD
Sbjct: 39 IALVKFYAPWCGHCKKIAPEYERAAPKLASNDPPVALVKVD 79
>U80029-11|AAB37590.1| 155|Caenorhabditis elegans Hypothetical
protein T20D4.7 protein.
Length = 155
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +3
Query: 129 KLVVVDFTATWCPPCQRIAP----FFEQLPAKFPRAVFLKVD 242
KLV F+A WCPPC+ P F+E++ +F VF+ D
Sbjct: 40 KLVGFYFSAHWCPPCRGFTPILKDFYEEVNEEF-EIVFVSSD 80
>U70849-4|AAK67231.1| 179|Caenorhabditis elegans Hypothetical
protein F29B9.5 protein.
Length = 179
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 66 GLATVIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAP 188
G+ + Q+ E A G K+V + F+A WCPPC++ P
Sbjct: 35 GVMLLKQDLTEVPAEEALKG-KVVALYFSAGWCPPCKQFTP 74
>U23511-9|AAC46796.1| 140|Caenorhabditis elegans Hypothetical
protein C32D5.8a protein.
Length = 140
Score = 31.5 bits (68), Expect = 0.53
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +3
Query: 129 KLVVVDFTATWCPPCQRIAP----FFEQLPAKFPRAVFLKVD 242
K V F+A WCPPC+ P F+E++ +F VF+ D
Sbjct: 26 KAVGFYFSAHWCPPCRGFTPILKDFYEEVEDEF-EVVFVSFD 66
>U23511-8|AAU20849.1| 167|Caenorhabditis elegans Hypothetical
protein C32D5.8b protein.
Length = 167
Score = 31.5 bits (68), Expect = 0.53
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = +3
Query: 129 KLVVVDFTATWCPPCQRIAP----FFEQLPAKFPRAVFLKVD 242
K V F+A WCPPC+ P F+E++ +F VF+ D
Sbjct: 53 KAVGFYFSAHWCPPCRGFTPILKDFYEEVEDEF-EVVFVSFD 93
>Z37139-1|CAA85491.1| 485|Caenorhabditis elegans Hypothetical
protein C14B1.1 protein.
Length = 485
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +3
Query: 78 VIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQ 200
++ +++F+ E N G + V+V F A WC C+ +AP +++
Sbjct: 26 LVLTESNFE-ETIN-GNEFVLVKFYAPWCVHCKSLAPKYDE 64
>U95074-1|AAB94647.1| 485|Caenorhabditis elegans protein disulphide
isomerase isoformI protein.
Length = 485
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +3
Query: 78 VIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQ 200
++ +++F+ E N G + V+V F A WC C+ +AP +++
Sbjct: 26 LVLTESNFE-ETIN-GNEFVLVKFYAPWCVHCKSLAPKYDE 64
>U40411-4|AAC47065.1| 440|Caenorhabditis elegans Temporarily
assigned gene nameprotein 320 protein.
Length = 440
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/37 (29%), Positives = 25/37 (67%)
Frame = +3
Query: 90 DAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQ 200
+A+FQ+++ N+ + +V+F A WC C+ + P +++
Sbjct: 31 EANFQSKVINSDD-IWIVEFYAPWCGHCKSLVPEYKK 66
>Z69637-1|CAA93467.1| 601|Caenorhabditis elegans Hypothetical
protein F35G2.1a protein.
Length = 601
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 138 VVDFTATWCPPCQRIAPFFEQ 200
+V+F A WC C+ AP+F Q
Sbjct: 72 LVEFYADWCGHCRAFAPYFRQ 92
>U41012-4|AAA82296.2| 413|Caenorhabditis elegans Hypothetical
protein C06A6.5 protein.
Length = 413
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 129 KLVVVDFTATWCPPCQRIAPFFEQ 200
++V V F A WCP +R+ P FE+
Sbjct: 43 QVVFVAFCADWCPFSRRLKPIFEE 66
>AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical
protein D2063.3a protein.
Length = 345
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +2
Query: 278 VSAMPTFIFYRNRTKIDRLEGGNTTVLENKV 370
++A PT +F+ N ++DR++G +++KV
Sbjct: 71 ITAAPTLVFFSNGKEVDRIDGFVPKEIQSKV 101
>AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical
protein D2063.3b protein.
Length = 342
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +2
Query: 278 VSAMPTFIFYRNRTKIDRLEGGNTTVLENKV 370
++A PT +F+ N ++DR++G +++KV
Sbjct: 71 ITAAPTLVFFSNGKEVDRIDGFVPKEIQSKV 101
>AF068720-8|AAM15583.1| 142|Caenorhabditis elegans Hypothetical
protein K02H11.6 protein.
Length = 142
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = +3
Query: 129 KLVVVDFTATWCPPCQRIAP----FFEQLPAKFPRAVFLKVD 242
K+V + F+A WC PC+ P F+E++ F VF D
Sbjct: 26 KIVGIYFSAHWCGPCRNFTPVLKDFYEEVQDDF-EIVFASSD 66
>U97402-2|AAB63409.2| 393|Caenorhabditis elegans Hypothetical
protein C30H7.2a protein.
Length = 393
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +3
Query: 102 QTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRA 224
QT AN +LV V+F A WC Q + P F + KF A
Sbjct: 29 QTIQAN---ELVFVNFYADWCRFSQMLKPIFLEASEKFKDA 66
>U97402-1|ABB51193.1| 393|Caenorhabditis elegans Hypothetical
protein C30H7.2b protein.
Length = 393
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +3
Query: 102 QTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRA 224
QT AN +LV V+F A WC Q + P F + KF A
Sbjct: 29 QTIQAN---ELVFVNFYADWCRFSQMLKPIFLEASEKFKDA 66
>AF038618-3|AAB92073.1| 572|Caenorhabditis elegans Hypothetical
protein F42G8.7 protein.
Length = 572
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 129 KLVVVDFTATWCPPCQRIAPFFEQLPAKF 215
+L V FTA+WCP +++ F Q A +
Sbjct: 15 QLTFVAFTASWCPFSRKLMSSFSQAAADY 43
>AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical
protein ZK973.11 protein.
Length = 447
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +3
Query: 141 VDFTATWCPPCQRIAPFFEQL 203
V+F A WC C+R+ P ++Q+
Sbjct: 48 VEFYAPWCAHCKRLHPVWDQV 68
>Z98866-5|CAB11548.1| 436|Caenorhabditis elegans Hypothetical
protein Y49E10.4 protein.
Length = 436
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 78 VIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAP 188
V+ D++F + N+ +V +F A WC CQ++ P
Sbjct: 157 VVLTDSNFDKLVLNSKEPWMV-EFFAPWCGHCQKLEP 192
>U80848-2|AAB37989.1| 574|Caenorhabditis elegans Hypothetical
protein T10H10.2 protein.
Length = 574
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 87 NDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQL 203
ND F + AG +V+F + WC C+ AP ++ L
Sbjct: 45 NDTIFGAQSGAAG---YLVEFYSDWCGHCRAFAPTYKNL 80
>U80027-5|AAC48123.1| 122|Caenorhabditis elegans Hypothetical
protein T28A11.13 protein.
Length = 122
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +3
Query: 147 FTATWCPPCQRIAP----FFEQLPAKFPRAVFLKVDVDRCPIQRVLR 275
F+A WCPPC P F+E++ F VF+ D +++ ++
Sbjct: 22 FSAHWCPPCCMFTPILKKFYEKVYDDF-EIVFVSSDPSESGLKKYMQ 67
>U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily
assigned gene nameprotein 137, isoform b protein.
Length = 1321
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +3
Query: 360 KTKLD---QYYGSDVAEEDEDNTVAGHMDLITFITKSECECLNEADDHPLAQA*QMTGDT 530
K KLD + GSD E+ NT+ G +D + K + CL E+ P TGD
Sbjct: 434 KLKLDDESRLGGSDTMTEN-CNTLLGKLDRLMKSLKEDANCLEESGFEPGDDDDCSTGDE 492
Query: 531 LL 536
+L
Sbjct: 493 ML 494
>U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily
assigned gene nameprotein 137, isoform a protein.
Length = 1372
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +3
Query: 360 KTKLD---QYYGSDVAEEDEDNTVAGHMDLITFITKSECECLNEADDHPLAQA*QMTGDT 530
K KLD + GSD E+ NT+ G +D + K + CL E+ P TGD
Sbjct: 434 KLKLDDESRLGGSDTMTEN-CNTLLGKLDRLMKSLKEDANCLEESGFEPGDDDDCSTGDE 492
Query: 531 LL 536
+L
Sbjct: 493 ML 494
>Z82068-3|CAB04900.2| 1071|Caenorhabditis elegans Hypothetical
protein W04A4.5 protein.
Length = 1071
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 251 MPDTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKVRSV 379
M D+ S ++A+ IFY NR + +EG N + ++ S+
Sbjct: 320 MADSDSDIRIAAIKLLIFYANRRGEEEIEGTNKKLYDDAFSSI 362
>Z81080-3|CAD30439.1| 608|Caenorhabditis elegans Hypothetical
protein F39H2.5 protein.
Length = 608
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 138 VVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVDRCP 257
++ +TA PP I P E +P KF V+ + CP
Sbjct: 271 IMGYTADSPPPAGLINPLEENVPHKFDSFQVTLVNANHCP 310
>U13876-14|AAA21168.1| 2500|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 1 protein.
Length = 2500
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +2
Query: 8 IHSLISSLSALPIEFVLNHG---LSHCNSK*CSFP 103
+ +I SLSA P + G L HC SK C++P
Sbjct: 1015 VRKVIESLSADPNTMLWTFGIVALQHCRSKLCAYP 1049
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,586,296
Number of Sequences: 27780
Number of extensions: 262560
Number of successful extensions: 666
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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