BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1065 (608 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_A3J1D0 Cluster: WblQ protein; n=1; Flavobacteria bacter... 35 1.3 UniRef50_A0BS32 Cluster: Chromosome undetermined scaffold_124, w... 35 1.3 UniRef50_Q54FB8 Cluster: Putative uncharacterized protein; n=1; ... 33 4.0 UniRef50_O96201 Cluster: Putative uncharacterized protein PFB054... 33 7.0 >UniRef50_A3J1D0 Cluster: WblQ protein; n=1; Flavobacteria bacterium BAL38|Rep: WblQ protein - Flavobacteria bacterium BAL38 Length = 387 Score = 35.1 bits (77), Expect = 1.3 Identities = 16/46 (34%), Positives = 28/46 (60%) Frame = -2 Query: 409 KDISDNYLSKLSSNKLAVHSXNLVHVKHLFRLIIITYHNETSLQNY 272 + I+ YLS++ ++K+ + S +L H+F L +I N T L+NY Sbjct: 279 RSIAKRYLSEIKNDKITLPSWDLSK-NHVFHLFVIRTSNRTELKNY 323 >UniRef50_A0BS32 Cluster: Chromosome undetermined scaffold_124, whole genome shotgun sequence; n=2; Alveolata|Rep: Chromosome undetermined scaffold_124, whole genome shotgun sequence - Paramecium tetraurelia Length = 1278 Score = 35.1 bits (77), Expect = 1.3 Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 3/92 (3%) Frame = -2 Query: 493 YTSTYETVKHYSIVEF--D*FIVSSIAFDNKDISDNYLSKLSSNKLAVHSXNLVHVKHLF 320 ++ + HY+ ++ + F + S D D D+ L K SN LA++ LV++ Sbjct: 754 FSGFFNNQPHYNHLDVMREIFSIFSQHIDKVDNVDSLLGKYKSNPLAINPNELVYINDPH 813 Query: 319 RLIIITYHNETSLQNYNTLAHV-NNTIKNEGT 227 RLI + +Q Y V N ++N+ T Sbjct: 814 RLIQYSTRTGVDIQQYIQRQMVFNKRLQNDST 845 >UniRef50_Q54FB8 Cluster: Putative uncharacterized protein; n=1; Dictyostelium discoideum AX4|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4 Length = 1777 Score = 33.5 bits (73), Expect = 4.0 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 9/83 (10%) Frame = -2 Query: 490 TSTYETVKHYSIVEFD*F-IVSSIA---FDNKD---ISDNYLSKLSSNKLAVHSXNLV-- 338 T YE++K YS + D F IV SI F +KD + +++ L+ L++ +++ Sbjct: 1528 TLLYESLKEYSTIRIDIFLIVQSIIPLFFKSKDGDYLIKTFIAILNFKLLSLKDNSIIAR 1587 Query: 337 HVKHLFRLIIITYHNETSLQNYN 269 K F+ I + +NE +L+NY+ Sbjct: 1588 KFKKFFQCINLPINNEFNLENYS 1610 >UniRef50_O96201 Cluster: Putative uncharacterized protein PFB0540w; n=1; Plasmodium falciparum 3D7|Rep: Putative uncharacterized protein PFB0540w - Plasmodium falciparum (isolate 3D7) Length = 1844 Score = 32.7 bits (71), Expect = 7.0 Identities = 19/64 (29%), Positives = 36/64 (56%) Frame = -2 Query: 409 KDISDNYLSKLSSNKLAVHSXNLVHVKHLFRLIIITYHNETSLQNYNTLAHVNNTIKNEG 230 KDI++N ++ + NKL + N ++ ++ I TY+ + +L N N + NN I ++G Sbjct: 733 KDINNNNITVSNKNKLMNNYINDNNIMNMEGSINETYNFDGTLNNKNVSNNNNNDIHDKG 792 Query: 229 TRST 218 +T Sbjct: 793 VLNT 796 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 568,342,784 Number of Sequences: 1657284 Number of extensions: 10581709 Number of successful extensions: 24100 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 23265 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 24094 length of database: 575,637,011 effective HSP length: 97 effective length of database: 414,880,463 effective search space used: 43562448615 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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