Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1065
         (608 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025905-1|ABG02149.1|  710|Drosophila melanogaster IP04501p pro...    29   6.6  
AE013599-2647|AAF57725.2|  710|Drosophila melanogaster CG33958-P...    29   6.6  

>BT025905-1|ABG02149.1|  710|Drosophila melanogaster IP04501p
           protein.
          Length = 710

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = -1

Query: 167 SRKWHDSVKML---RLEESGPLGAGGVIILKRFWNTMSSGPMGSFSAVVWR 24
           + + HDS++ +   R E  G +   G  ++  +W T   GP+ +   + WR
Sbjct: 635 TEEMHDSLQQVGGFRTEHRGLIDVKGKGLMSTYWLTCKDGPVRAREEISWR 685


>AE013599-2647|AAF57725.2|  710|Drosophila melanogaster CG33958-PA
           protein.
          Length = 710

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = -1

Query: 167 SRKWHDSVKML---RLEESGPLGAGGVIILKRFWNTMSSGPMGSFSAVVWR 24
           + + HDS++ +   R E  G +   G  ++  +W T   GP+ +   + WR
Sbjct: 635 TEEMHDSLQQVGGFRTEHRGLIDVKGKGLMSTYWLTCKDGPVRAREEISWR 685


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,498,651
Number of Sequences: 53049
Number of extensions: 497676
Number of successful extensions: 1009
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)