Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1063
(645 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 101 2e-20
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 100 3e-20
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 99 5e-20
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 99 5e-20
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 99 5e-20
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 100 6e-20
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 97 3e-19
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 95 1e-18
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 92 1e-17
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 91 2e-17
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 91 2e-17
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 91 2e-17
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 91 3e-17
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 91 3e-17
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 90 4e-17
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 90 5e-17
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 89 8e-17
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 89 1e-16
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 88 1e-16
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 88 1e-16
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 86 8e-16
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 84 3e-15
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 83 4e-15
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 80 5e-14
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 80 5e-14
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 79 7e-14
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 79 9e-14
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 79 1e-13
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 78 2e-13
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 77 5e-13
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 75 2e-12
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 74 3e-12
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 74 3e-12
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 73 5e-12
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 71 2e-11
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 71 3e-11
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 70 4e-11
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 69 7e-11
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 69 1e-10
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 69 1e-10
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 68 2e-10
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 68 2e-10
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 68 2e-10
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 67 4e-10
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 66 5e-10
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 66 5e-10
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 66 5e-10
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 66 7e-10
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 65 2e-09
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 64 2e-09
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 64 3e-09
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 64 3e-09
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 64 3e-09
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 64 3e-09
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 63 5e-09
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 63 6e-09
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 62 1e-08
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 62 1e-08
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 62 1e-08
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 61 3e-08
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 60 3e-08
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 60 4e-08
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 60 4e-08
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 59 8e-08
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 59 1e-07
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 59 1e-07
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 59 1e-07
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 59 1e-07
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 59 1e-07
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 58 1e-07
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 58 2e-07
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 58 2e-07
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 58 2e-07
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 56 6e-07
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 56 6e-07
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 56 6e-07
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 55 1e-06
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 55 1e-06
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 55 2e-06
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 55 2e-06
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 55 2e-06
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 54 3e-06
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 53 5e-06
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 53 7e-06
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 53 7e-06
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 53 7e-06
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 52 9e-06
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 51 3e-05
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 50 4e-05
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 50 4e-05
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 50 6e-05
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 48 2e-04
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 47 3e-04
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 46 6e-04
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 44 0.003
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 43 0.006
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 42 0.010
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 42 0.013
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 41 0.029
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 36 0.63
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 34 3.4
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 34 3.4
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 33 4.5
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 101 bits (241), Expect = 2e-20
Identities = 43/48 (89%), Positives = 46/48 (95%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 643
++ DRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISH
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISH 256
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/82 (47%), Positives = 46/82 (56%)
Frame = +2
Query: 8 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 187
PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+NN+ F
Sbjct: 44 PGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFW 103
Query: 188 XXXXXXXXXXXXXIVENGAGTG 253
VE GAGTG
Sbjct: 104 LLPPSFLLLLASSGVEAGAGTG 125
Score = 62.1 bits (144), Expect = 1e-08
Identities = 34/66 (51%), Positives = 38/66 (57%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVYPPL+ N+AH G SVDL IFSLHLAG+SS S Q PLFV
Sbjct: 127 TVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVW 186
Query: 436 AVGITA 453
AV +TA
Sbjct: 187 AVLVTA 192
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 100 bits (239), Expect = 3e-20
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 643
++ DRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYILILPGFGIISH
Sbjct: 193 LLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGIISH 240
Score = 72.9 bits (171), Expect = 6e-12
Identities = 38/94 (40%), Positives = 49/94 (52%)
Frame = +2
Query: 2 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 181
G PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN+
Sbjct: 26 GMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNNMS 85
Query: 182 FXXXXXXXXXXXXXXIVENGAGTG*QFTPHFHLI 283
F + G GTG P LI
Sbjct: 86 FWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLI 119
Score = 52.4 bits (120), Expect = 9e-06
Identities = 30/66 (45%), Positives = 35/66 (53%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVYPPLS + H G SVDL IFSLHLAG SS + D++ LF
Sbjct: 111 TVYPPLSLILGHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSLFSW 170
Query: 436 AVGITA 453
+V ITA
Sbjct: 171 SVFITA 176
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 99 bits (238), Expect = 5e-20
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 643
++ DRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH
Sbjct: 210 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISH 257
Score = 79.0 bits (186), Expect = 9e-14
Identities = 41/84 (48%), Positives = 48/84 (57%)
Frame = +2
Query: 2 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 181
G PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+NN+
Sbjct: 43 GQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMS 102
Query: 182 FXXXXXXXXXXXXXXIVENGAGTG 253
F VE GAGTG
Sbjct: 103 FWLXPPSFLLLLASSTVEAGAGTG 126
Score = 63.3 bits (147), Expect = 5e-09
Identities = 36/66 (54%), Positives = 39/66 (59%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVYPPL+ N+AH G SVDLAIFSLHLAGISS S Q PLFV
Sbjct: 128 TVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVW 187
Query: 436 AVGITA 453
+V ITA
Sbjct: 188 SVLITA 193
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 99 bits (238), Expect = 5e-20
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 643
++ DRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISH 256
Score = 75.4 bits (177), Expect = 1e-12
Identities = 39/82 (47%), Positives = 46/82 (56%)
Frame = +2
Query: 8 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 187
PG+L+GDDQIYN IVTAHA N LVPL++GAPD+AFPR+NN+ F
Sbjct: 44 PGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAFPRMNNMSFW 103
Query: 188 XXXXXXXXXXXXXIVENGAGTG 253
VE GAGTG
Sbjct: 104 LLPPSFLLLLASSGVEAGAGTG 125
Score = 59.7 bits (138), Expect = 6e-08
Identities = 32/66 (48%), Positives = 38/66 (57%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVYPPL+ N+AH G SVDL IFSLHLAG+SS + Q PLFV
Sbjct: 127 TVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVW 186
Query: 436 AVGITA 453
+V +TA
Sbjct: 187 SVLVTA 192
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 99 bits (238), Expect = 5e-20
Identities = 42/48 (87%), Positives = 46/48 (95%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 643
++ DRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH
Sbjct: 209 LLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISH 256
Score = 75.8 bits (178), Expect = 8e-13
Identities = 38/84 (45%), Positives = 47/84 (55%)
Frame = +2
Query: 2 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 181
G PG+L+G+D IYN IVTAHA N LVPL++GAPD+AFPR+NN+
Sbjct: 42 GQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMS 101
Query: 182 FXXXXXXXXXXXXXXIVENGAGTG 253
F +VE GAGTG
Sbjct: 102 FWLLPPSLLLLLASAMVEAGAGTG 125
Score = 57.2 bits (132), Expect = 3e-07
Identities = 32/66 (48%), Positives = 37/66 (56%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVYPPL+ N +H G SVDL IFSLHLAG+SS + Q PLFV
Sbjct: 127 TVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVW 186
Query: 436 AVGITA 453
+V ITA
Sbjct: 187 SVLITA 192
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 99.5 bits (237), Expect = 6e-20
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 643
++ DRN NT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISH
Sbjct: 212 LLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISH 259
Score = 61.7 bits (143), Expect = 1e-08
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 PGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 181
PG I G+ Q+YN ++TAHA N VP+++GAPD+AFPR+NNI
Sbjct: 45 PGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNIS 104
Query: 182 FXXXXXXXXXXXXXXIVENGAGTG 253
F +VE G+GTG
Sbjct: 105 FWLLPPSLLLLLSSALVEVGSGTG 128
Score = 58.4 bits (135), Expect = 1e-07
Identities = 31/67 (46%), Positives = 39/67 (58%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVYPPLS +H G +VDLAIFSLHL+G+SS + +LPLFV
Sbjct: 130 TVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVW 189
Query: 436 AVGITAF 456
+V +TAF
Sbjct: 190 SVLVTAF 196
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 97.1 bits (231), Expect = 3e-19
Identities = 39/48 (81%), Positives = 45/48 (93%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 643
++ DRN NTSF+DPAGGGDPILYQHLF FFGHPEVYILI+PGFG++SH
Sbjct: 209 LLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMVSH 256
Score = 66.5 bits (155), Expect = 5e-10
Identities = 34/79 (43%), Positives = 41/79 (51%)
Frame = +2
Query: 17 LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXX 196
L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+NNI F
Sbjct: 47 LNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLP 106
Query: 197 XXXXXXXXXXIVENGAGTG 253
VE GAGTG
Sbjct: 107 PSLILLLASAFVEQGAGTG 125
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/66 (48%), Positives = 38/66 (57%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVYPPLS +H G SVDLAIFSLHL+GISS + +LPLFV
Sbjct: 127 TVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVW 186
Query: 436 AVGITA 453
A+ +TA
Sbjct: 187 AIFVTA 192
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 95.1 bits (226), Expect = 1e-18
Identities = 40/48 (83%), Positives = 44/48 (91%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 643
++ DRN NTSFFD +GGGDPILYQHLF FFGHPEVYILILPGFG+ISH
Sbjct: 217 LLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILPGFGMISH 264
Score = 63.7 bits (148), Expect = 4e-09
Identities = 31/79 (39%), Positives = 42/79 (53%)
Frame = +2
Query: 17 LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXX 196
L+G+ QIYN ++TAHA N LVP+++G+PD+AFPR+NNI F
Sbjct: 55 LLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLP 114
Query: 197 XXXXXXXXXXIVENGAGTG 253
+VE G GTG
Sbjct: 115 PSLCLLLMSALVEVGVGTG 133
Score = 56.0 bits (129), Expect = 7e-07
Identities = 30/67 (44%), Positives = 39/67 (58%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVYPPLSS +H G +VDLAIFSLH++G SS S ++PLFV
Sbjct: 135 TVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVW 194
Query: 436 AVGITAF 456
++ +TAF
Sbjct: 195 SILVTAF 201
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 91.9 bits (218), Expect = 1e-17
Identities = 39/47 (82%), Positives = 43/47 (91%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
++ DRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI+PGFGIIS
Sbjct: 210 VLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIPGFGIIS 256
Score = 60.1 bits (139), Expect = 4e-08
Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 PG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 184
PG I D+Q+YN+I+TAHA N L+PL LG PD+ FPR+NNI +
Sbjct: 44 PGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPRLNNISY 103
Query: 185 XXXXXXXXXXXXXXIVENGAGTG 253
+ENG GTG
Sbjct: 104 LLLIPSIVLFLFAGGIENGVGTG 126
Score = 49.6 bits (113), Expect = 6e-05
Identities = 30/66 (45%), Positives = 34/66 (51%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
T+YPPLS +H G SVDLAIF LHL+GISS +L LF
Sbjct: 128 TLYPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAW 187
Query: 436 AVGITA 453
AV ITA
Sbjct: 188 AVVITA 193
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 91.5 bits (217), Expect = 2e-17
Identities = 37/48 (77%), Positives = 43/48 (89%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 643
++ DRN NTSF+DP GGGD +LYQHLF FFGHPEVYILILPGFG++SH
Sbjct: 213 LLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILILPGFGLVSH 260
Score = 53.2 bits (122), Expect = 5e-06
Identities = 30/67 (44%), Positives = 34/67 (50%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVYPPLSS +H G SVDL IFS HL GI S LPLFV
Sbjct: 131 TVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVW 190
Query: 436 AVGITAF 456
+V +T+F
Sbjct: 191 SVAVTSF 197
Score = 51.6 bits (118), Expect = 2e-05
Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
Frame = +2
Query: 17 LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXX 196
L G+ YN I T H N VP+++GAPD++FPR+NN F
Sbjct: 51 LFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFPRLNNFSFWLLP 110
Query: 197 XXXXXXXXXXIVENGAGTG*Q-FTPHFHLISHIEEDP*ILLF-FHYI 331
E G GTG + P L SH +++F FH +
Sbjct: 111 GAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLV 157
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 91.5 bits (217), Expect = 2e-17
Identities = 48/89 (53%), Positives = 58/89 (65%)
Frame = -1
Query: 267 GVNCYPVPAPFSTILLEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPXXXXX 88
G +PVP P STI L + ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPP
Sbjct: 105 GYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGM 164
Query: 87 XXXXXXXKACAVTIVL*I*SSPINDPGFP 1
KA AVT+ L I S PI PG P
Sbjct: 165 TMKKIITKAWAVTMTL-IWSFPIKLPGCP 192
Score = 46.4 bits (105), Expect = 6e-04
Identities = 31/68 (45%), Positives = 34/68 (50%)
Frame = -2
Query: 458 KNAVIPTAHTNKGN*SNDILFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAIL 279
K AV T TN G S I +R I+E PAKC+EKI STD P CAI
Sbjct: 41 KMAVSNTDQTNSGMRSMVIPADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIP 100
Query: 278 DESGG*TV 255
SGG TV
Sbjct: 101 LASGGYTV 108
Score = 43.6 bits (98), Expect = 0.004
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = -1
Query: 579 NKC*YKIGSPPPAGSKNDVFKFRSL 505
NKC + IGSPPPAGSK +VFKFRS+
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSV 24
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 91.1 bits (216), Expect = 2e-17
Identities = 38/48 (79%), Positives = 44/48 (91%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 643
++ DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYILI+PGFGIISH
Sbjct: 210 LLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGFGIISH 257
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/84 (39%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 PGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 181
PGS L G+ Q++N +V HA N L+PL++GA D AFPRINNI
Sbjct: 43 PGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIA 102
Query: 182 FXXXXXXXXXXXXXXIVENGAGTG 253
F +VE+GAGTG
Sbjct: 103 FWVLPMGLVCLVTSTLVESGAGTG 126
Score = 58.4 bits (135), Expect = 1e-07
Identities = 33/67 (49%), Positives = 38/67 (56%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVYPPLSS AH G SVDLAIF+LHL ISS + +LPLFV
Sbjct: 128 TVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVW 187
Query: 436 AVGITAF 456
++ ITAF
Sbjct: 188 SIFITAF 194
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 90.6 bits (215), Expect = 3e-17
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 643
++ DRN T+FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP FG+ISH
Sbjct: 315 LLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVISH 362
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +2
Query: 26 DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXX 205
D ++N ++T H N +PL++GAPD+AFPR+NN+ +
Sbjct: 156 DGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPRLNNLSYWMYVAGT 215
Query: 206 XXXXXXXIVENGAGTG*QFTP 268
+++ GAG G F P
Sbjct: 216 CLAFCSVMIDGGAGPGWTFYP 236
Score = 41.5 bits (93), Expect = 0.017
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
T YPP+S+ R+VD AIF++H++G SS + ++PLF
Sbjct: 233 TFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGMTLHKVPLFAW 292
Query: 436 AVGITAF 456
+V +TA+
Sbjct: 293 SVFVTAW 299
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 90.6 bits (215), Expect = 3e-17
Identities = 36/48 (75%), Positives = 44/48 (91%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 643
++ DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SH
Sbjct: 299 LLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSH 346
Score = 33.9 bits (74), Expect = 3.4
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 348
T+YPPLS G VD +FSLHLAG+SS
Sbjct: 223 TLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 90.2 bits (214), Expect = 4e-17
Identities = 38/47 (80%), Positives = 43/47 (91%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
++ DRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS
Sbjct: 235 VLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIIS 281
Score = 63.3 bits (147), Expect = 5e-09
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 PG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 184
PG I ++Q+YN+I+TAHA N L+PL++G PD+AFPR+NNI F
Sbjct: 72 PGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMPLMIGGPDMAFPRLNNISF 131
Query: 185 XXXXXXXXXXXXXXIVENGAGTG 253
I+E G GTG
Sbjct: 132 WLLPPSLLLLVFSAIIEGGVGTG 154
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +1
Query: 262 YPPLSSNIAHRGRSVDLAIFSLHLAGISS 348
YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 162 YPPLSGLQSHSGPSVDLAIFALHLSGVSS 190
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 89.8 bits (213), Expect = 5e-17
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 643
++ DRN NTSFF+ AGGGDPI YQH F FFGHPEVYILI+PGFGI+SH
Sbjct: 210 LLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILIIPGFGIVSH 257
Score = 61.3 bits (142), Expect = 2e-08
Identities = 35/67 (52%), Positives = 38/67 (56%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVYPPLSS AH G SVDLAIFSLHL ISS S ++PLFV
Sbjct: 128 TVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVW 187
Query: 436 AVGITAF 456
A+ ITAF
Sbjct: 188 AIFITAF 194
Score = 55.2 bits (127), Expect = 1e-06
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 PGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 181
PGS L G+ Q++N +V HA N ++PL++GA D++FPRIN+I
Sbjct: 43 PGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFPRINSIG 102
Query: 182 FXXXXXXXXXXXXXXIVENGAGTG 253
F +VE+GAGTG
Sbjct: 103 FWLLPMGLVCLVTSTLVESGAGTG 126
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 89.0 bits (211), Expect = 8e-17
Identities = 46/84 (54%), Positives = 50/84 (59%)
Frame = +2
Query: 2 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 181
G PGSLIGDDQIYNTIVTAHA N LVPL+LGAPD+AFPR+NN+
Sbjct: 39 GTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMS 98
Query: 182 FXXXXXXXXXXXXXXIVENGAGTG 253
F IVENGAGTG
Sbjct: 99 FWLLPPSLTLLISSSIVENGAGTG 122
Score = 82.6 bits (195), Expect = 7e-15
Identities = 44/67 (65%), Positives = 45/67 (67%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVYPPLSSNIAH G SVDLAIFSLHLAGISS SFDQ+PLFV
Sbjct: 124 TVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVW 183
Query: 436 AVGITAF 456
AVGITAF
Sbjct: 184 AVGITAF 190
Score = 72.1 bits (169), Expect = 1e-11
Identities = 29/35 (82%), Positives = 33/35 (94%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 604
++ DRNLNTSFFDPAGGGDPILYQHLF FFGHP++
Sbjct: 206 LLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 88.6 bits (210), Expect = 1e-16
Identities = 45/84 (53%), Positives = 50/84 (59%)
Frame = +2
Query: 2 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 181
G PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN+
Sbjct: 15 GTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNNMS 74
Query: 182 FXXXXXXXXXXXXXXIVENGAGTG 253
F IVENGAGTG
Sbjct: 75 FWLLPPSLILLISSSIVENGAGTG 98
Score = 82.6 bits (195), Expect = 7e-15
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 616
++ DRNLNTSFFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 182 LLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
Score = 79.8 bits (188), Expect = 5e-14
Identities = 42/66 (63%), Positives = 44/66 (66%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVYPPLSSNIAH G SVDLAIFSLHLAGISS SFDQ+PLF+
Sbjct: 100 TVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMSFDQMPLFIW 159
Query: 436 AVGITA 453
AVGITA
Sbjct: 160 AVGITA 165
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 88.2 bits (209), Expect = 1e-16
Identities = 39/54 (72%), Positives = 42/54 (77%)
Frame = +2
Query: 482 SWSYYNIINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 643
SW N N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH
Sbjct: 180 SWGNNNASYSSNYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISH 233
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 88.2 bits (209), Expect = 1e-16
Identities = 38/47 (80%), Positives = 43/47 (91%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
++ DRNLNTSF++ AGGGD ILYQHLF FFGHPEVYILI+PGFGIIS
Sbjct: 236 LLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILIIPGFGIIS 282
Score = 61.7 bits (143), Expect = 1e-08
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +2
Query: 8 PG-SLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 184
PG I D+Q+YN+I+T+H N L+P+++G PD+AFPR+NN+ +
Sbjct: 70 PGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPRLNNVSY 129
Query: 185 XXXXXXXXXXXXXXIVENGAGTG 253
I+ENG GTG
Sbjct: 130 WLLIPSLFLFVFAAIIENGVGTG 152
Score = 44.4 bits (100), Expect = 0.002
Identities = 27/66 (40%), Positives = 31/66 (46%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
T+YPPLS +H VDL IF LHL+GISS +L LF
Sbjct: 154 TLYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGW 213
Query: 436 AVGITA 453
AV ITA
Sbjct: 214 AVVITA 219
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 85.8 bits (203), Expect = 8e-16
Identities = 36/47 (76%), Positives = 41/47 (87%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
++ DRN T+F+D AGGGDP LYQHLF FFGHPEVYI+ILPGFGIIS
Sbjct: 252 LLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIMILPGFGIIS 298
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/73 (31%), Positives = 32/73 (43%)
Frame = +2
Query: 35 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 214
++N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALL 152
Query: 215 XXXXIVENGAGTG 253
V G G G
Sbjct: 153 LGSTFVPGGTGNG 165
Score = 44.0 bits (99), Expect = 0.003
Identities = 26/67 (38%), Positives = 36/67 (53%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVY PLS++ G +VD+AI SLH+AG SS + ++PLFV
Sbjct: 171 TVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFVW 229
Query: 436 AVGITAF 456
+V +TAF
Sbjct: 230 SVLVTAF 236
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 83.8 bits (198), Expect = 3e-15
Identities = 35/48 (72%), Positives = 42/48 (87%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 643
++ DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISH
Sbjct: 212 LLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISH 259
Score = 41.9 bits (94), Expect = 0.013
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 348
T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 129 TMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
Score = 33.5 bits (73), Expect = 4.5
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +2
Query: 5 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 178
+PG + +Y++I+T HA N +PL++ D++ PR+NN+
Sbjct: 45 HPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPRLNNL 102
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 83.4 bits (197), Expect = 4e-15
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 643
+++D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH
Sbjct: 215 LLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISH 262
Score = 38.7 bits (86), Expect = 0.12
Identities = 20/73 (27%), Positives = 29/73 (39%)
Frame = +2
Query: 35 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 214
+YN I T H N +P++ G+P++A+PRIN+I
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLV 117
Query: 215 XXXXIVENGAGTG 253
E G GTG
Sbjct: 118 ILSTAAEFGGGTG 130
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 79.8 bits (188), Expect = 5e-14
Identities = 32/47 (68%), Positives = 41/47 (87%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
++ DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S
Sbjct: 227 LLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVS 273
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLFV
Sbjct: 145 TLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVW 204
Query: 436 AVGITA 453
+V ITA
Sbjct: 205 SVLITA 210
Score = 53.2 bits (122), Expect = 5e-06
Identities = 27/83 (32%), Positives = 40/83 (48%)
Frame = +2
Query: 5 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 184
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 185 XXXXXXXXXXXXXXIVENGAGTG 253
+++ G G+G
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSG 143
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 79.8 bits (188), Expect = 5e-14
Identities = 32/47 (68%), Positives = 41/47 (87%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
++ DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S
Sbjct: 227 LLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVS 273
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLFV
Sbjct: 145 TLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVW 204
Query: 436 AVGITA 453
+V ITA
Sbjct: 205 SVLITA 210
Score = 53.2 bits (122), Expect = 5e-06
Identities = 27/83 (32%), Positives = 40/83 (48%)
Frame = +2
Query: 5 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 184
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 185 XXXXXXXXXXXXXXIVENGAGTG 253
+++ G G+G
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSG 143
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 79.4 bits (187), Expect = 7e-14
Identities = 33/44 (75%), Positives = 38/44 (86%)
Frame = +2
Query: 509 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+ILPGFGIIS
Sbjct: 218 DRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGFGIIS 261
Score = 33.9 bits (74), Expect = 3.4
Identities = 19/74 (25%), Positives = 28/74 (37%)
Frame = +2
Query: 32 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 211
+IYN + T H N L P++LG D+ +PR+N
Sbjct: 60 EIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVL 119
Query: 212 XXXXXIVENGAGTG 253
+E G+GTG
Sbjct: 120 VVSSIYLEIGSGTG 133
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 79.0 bits (186), Expect = 9e-14
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
++ DRN NTSF+D GG+P+LYQHLF FFGHPEVY++ILP FGIIS
Sbjct: 219 LLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVFGIIS 265
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Frame = +2
Query: 5 NPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 178
+PG G Q+YN+++T H N ++PL+LGAP++AFPR+N +
Sbjct: 52 SPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRVNAL 111
Query: 179 RFXXXXXXXXXXXXXXIVENGAGTG*QFTP 268
F + G G+ F P
Sbjct: 112 SFWFTFVALLMVYQSFFIGGGPGSSWTFYP 141
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 78.6 bits (185), Expect = 1e-13
Identities = 39/84 (46%), Positives = 47/84 (55%)
Frame = +2
Query: 2 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 181
G PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN+
Sbjct: 25 GQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNNMS 84
Query: 182 FXXXXXXXXXXXXXXIVENGAGTG 253
F VE+GAGTG
Sbjct: 85 FWFLPPSLSLLLMSAAVESGAGTG 108
Score = 59.7 bits (138), Expect = 6e-08
Identities = 33/66 (50%), Positives = 37/66 (56%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVYPPLS N AH G SVDLAIFSLHLAG+SS + + LFV
Sbjct: 110 TVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMKIELVSLFVW 169
Query: 436 AVGITA 453
+V ITA
Sbjct: 170 SVKITA 175
Score = 58.0 bits (134), Expect = 2e-07
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF 580
++ DRN NTSFFDPAGGGDPILYQHLF
Sbjct: 192 LLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 78.2 bits (184), Expect = 2e-13
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
I+ DRN NTSF+D GGGD IL+QH+F FFGHPEVYI++LP FG+IS
Sbjct: 212 ILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLIS 258
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/81 (29%), Positives = 34/81 (41%)
Frame = +2
Query: 11 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXX 190
G L GD Q YN ++T+H N +P++ G PD+ FPR+NN+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 191 XXXXXXXXXXXXIVENGAGTG 253
+ E G G G
Sbjct: 108 YLAGFGCVVNGFLTEEGMGVG 128
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 76.6 bits (180), Expect = 5e-13
Identities = 37/83 (44%), Positives = 46/83 (55%)
Frame = +2
Query: 5 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 184
+PGS++GDD +YN IVTAHA N VPL++GAPD+AFPR+NNI F
Sbjct: 44 SPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNNISF 103
Query: 185 XXXXXXXXXXXXXXIVENGAGTG 253
+VE GAGTG
Sbjct: 104 WLLPPALFLLLGSSLVEQGAGTG 126
Score = 59.3 bits (137), Expect = 8e-08
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFG 592
++ DR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 210 LLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/66 (48%), Positives = 39/66 (59%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVYPPL+S AH G SVD+AIFSLHLAG+SS + ++PLFV
Sbjct: 128 TVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVW 187
Query: 436 AVGITA 453
+V ITA
Sbjct: 188 SVLITA 193
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/82 (45%), Positives = 46/82 (56%)
Frame = +2
Query: 8 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 187
PG+L+GDDQIYN IVTAHA N L+PL++GAPD+AFPR+NN+ F
Sbjct: 33 PGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFW 92
Query: 188 XXXXXXXXXXXXXIVENGAGTG 253
+E GAGTG
Sbjct: 93 LLPPSFLLLLASSGIEAGAGTG 114
Score = 62.9 bits (146), Expect = 6e-09
Identities = 36/66 (54%), Positives = 38/66 (57%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVYPPL+ N+AH G SVDL IFSLHLAGISS S Q PLFV
Sbjct: 116 TVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVW 175
Query: 436 AVGITA 453
AV ITA
Sbjct: 176 AVLITA 181
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 74.1 bits (174), Expect = 3e-12
Identities = 30/47 (63%), Positives = 38/47 (80%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
I+ D++L T F+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S
Sbjct: 193 ILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFS 239
Score = 34.3 bits (75), Expect = 2.6
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 348
T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 117 TFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 73.7 bits (173), Expect = 3e-12
Identities = 40/84 (47%), Positives = 47/84 (55%)
Frame = +2
Query: 2 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 181
G PG+L+GDDQ N IVTAHA N LVPL++GAPD+AFPR+NN+
Sbjct: 43 GQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMS 102
Query: 182 FXXXXXXXXXXXXXXIVENGAGTG 253
F VE GAGTG
Sbjct: 103 FWLLPPSFLLLLASSTVEAGAGTG 126
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 73.3 bits (172), Expect = 5e-12
Identities = 47/116 (40%), Positives = 56/116 (48%)
Frame = +1
Query: 103 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKNCRKWCRNRITVYPPLSSN 282
W IWKL P NK YKILT PL Y K+N PL+S+
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRNSS-----------PLASS 76
Query: 283 IAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 450
IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV IT
Sbjct: 77 IAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFIT 132
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 70.9 bits (166), Expect = 2e-11
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = +1
Query: 514 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSY 645
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSY
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSY 50
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 70.5 bits (165), Expect = 3e-11
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = +2
Query: 524 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
TSFF+P GGGDP++YQHLF F+ HP VYI+ILP FG+IS
Sbjct: 228 TSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVIS 266
Score = 33.5 bits (73), Expect = 4.5
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +2
Query: 32 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 184
++YN ++T H N L+PL++G D+AFPR+N + F
Sbjct: 67 EMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNAVAF 116
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 70.1 bits (164), Expect = 4e-11
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
++ DR L ++FFDP GG +L+QH F FGHPEVYILILPGFG+IS
Sbjct: 228 LLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMIS 274
Score = 33.1 bits (72), Expect = 5.9
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 116 N*LVPLILGAPDIAFPRINNIRF 184
N VPL++GA D+AFPR+N+ F
Sbjct: 99 NYFVPLMIGARDVAFPRLNSFGF 121
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 69.3 bits (162), Expect = 7e-11
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +2
Query: 509 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+
Sbjct: 373 DRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFIN 416
Score = 36.7 bits (81), Expect = 0.48
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +2
Query: 23 GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 184
GD Y +VTAH N L+P +G+ D+A+PR+N+I F
Sbjct: 99 GDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRLNSIGF 152
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 68.9 bits (161), Expect = 1e-10
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = +2
Query: 497 NIINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
++I DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ LP G++S
Sbjct: 224 SLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMVS 271
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 68.9 bits (161), Expect = 1e-10
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
++ DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S
Sbjct: 264 LLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVS 309
Score = 32.7 bits (71), Expect = 7.8
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 35 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 184
+YN ++T+H N +PL++ A D+AFPRIN I F
Sbjct: 109 LYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAFPRINAIAF 157
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 68.1 bits (159), Expect = 2e-10
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
++ D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S
Sbjct: 235 LLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFS 281
Score = 35.9 bits (79), Expect = 0.84
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 8 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 184
P L+ D +YN + T H N L+P ++GAPD+AFP++N F
Sbjct: 69 PADLV-DPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKLNAAAF 125
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/47 (65%), Positives = 36/47 (76%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
++ DR+ T FF P GGD +L+QHLF FFGHPEVYILILP GIIS
Sbjct: 227 LLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIIS 273
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/61 (50%), Positives = 38/61 (62%)
Frame = +2
Query: 2 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 181
G PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN+
Sbjct: 26 GQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMS 85
Query: 182 F 184
F
Sbjct: 86 F 86
Score = 33.1 bits (72), Expect = 5.9
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 295 GRSVDLAIFSLHLAGISS 348
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 66.9 bits (156), Expect = 4e-10
Identities = 28/47 (59%), Positives = 38/47 (80%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
++ DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S
Sbjct: 221 LLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTS 265
Score = 33.1 bits (72), Expect = 5.9
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 35 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 184
IYN +T H N L+P+++G +++ PR+N I F
Sbjct: 63 IYNNWITIHGLIMLFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISF 112
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 66.5 bits (155), Expect = 5e-10
Identities = 34/79 (43%), Positives = 41/79 (51%)
Frame = +2
Query: 17 LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXX 196
L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+NNI F
Sbjct: 47 LNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLP 106
Query: 197 XXXXXXXXXXIVENGAGTG 253
VE GAGTG
Sbjct: 107 PSLILLLASAFVEQGAGTG 125
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/66 (48%), Positives = 38/66 (57%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVYPPLS +H G SVDLAIFSLHL+GISS + +LPLFV
Sbjct: 127 TVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVW 186
Query: 436 AVGITA 453
A+ +TA
Sbjct: 187 AIFVTA 192
Score = 56.8 bits (131), Expect = 4e-07
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF 580
++ DRN NTSF+DPAGGGDPILYQHLF
Sbjct: 209 LLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 66.5 bits (155), Expect = 5e-10
Identities = 34/79 (43%), Positives = 41/79 (51%)
Frame = +2
Query: 17 LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXX 196
L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+NNI F
Sbjct: 47 LNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLP 106
Query: 197 XXXXXXXXXXIVENGAGTG 253
VE GAGTG
Sbjct: 107 PSLILLLASAFVEQGAGTG 125
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/66 (48%), Positives = 38/66 (57%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVYPPLS +H G SVDLAIFSLHL+GISS + +LPLFV
Sbjct: 127 TVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVW 186
Query: 436 AVGITA 453
A+ +TA
Sbjct: 187 AIFVTA 192
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 66.5 bits (155), Expect = 5e-10
Identities = 34/79 (43%), Positives = 41/79 (51%)
Frame = +2
Query: 17 LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXX 196
L GD Q+YN I+TAHA N LVP+++GAPD+AFPR+NNI F
Sbjct: 47 LNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLP 106
Query: 197 XXXXXXXXXXIVENGAGTG 253
VE GAGTG
Sbjct: 107 PSLILLLASAFVEQGAGTG 125
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 66.1 bits (154), Expect = 7e-10
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 643
++ DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+
Sbjct: 296 LLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISY 341
Score = 41.9 bits (94), Expect = 0.013
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +2
Query: 5 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 184
+PG + + YN+++T+H N L+PL++GA D+AFPRIN I F
Sbjct: 125 DPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRINAIAF 183
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 64.9 bits (151), Expect = 2e-09
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGH 595
++ DRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 128 LLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 60.1 bits (139), Expect = 4e-08
Identities = 33/66 (50%), Positives = 39/66 (59%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TV PPLS+NIAH G SVDLAIFSLH+AG+ S + ++PLFV
Sbjct: 46 TVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVW 105
Query: 436 AVGITA 453
AV ITA
Sbjct: 106 AVEITA 111
Score = 35.1 bits (77), Expect = 1.5
Identities = 21/46 (45%), Positives = 23/46 (50%)
Frame = +2
Query: 131 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*QFTP 268
L LGAPD FPR N+ F VE GAGTG +P
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSP 49
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 64.5 bits (150), Expect = 2e-09
Identities = 27/44 (61%), Positives = 34/44 (77%)
Frame = +2
Query: 509 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
DR T+FF+P GG+ ++++HLF FGHPEVYILILP FGI S
Sbjct: 221 DRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFS 264
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 64.1 bits (149), Expect = 3e-09
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = +2
Query: 533 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
FDPA GGDP+L+QHLF F+ HP VYI++LP FG++S
Sbjct: 246 FDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMS 281
Score = 39.9 bits (89), Expect = 0.051
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = +2
Query: 8 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 172
PG I D YN T H N ++PL+LGA D+AFPR+N
Sbjct: 74 PGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLN 128
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 64.1 bits (149), Expect = 3e-09
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = +2
Query: 509 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
+R T FFD A GG P+L+Q LF FFGHPEVYILILP G++S
Sbjct: 210 ERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVS 253
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/57 (56%), Positives = 38/57 (66%), Gaps = 10/57 (17%)
Frame = +2
Query: 500 IINDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
++ DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S
Sbjct: 239 LLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVS 295
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 64.1 bits (149), Expect = 3e-09
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
++ DR L +DPA GG +L+QHLF FFGHPEVY+L LP FGI+S
Sbjct: 235 VLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVS 280
Score = 33.1 bits (72), Expect = 5.9
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2
Query: 116 N*LVPLILGAPDIAFPRINNIRF 184
N ++PL +GAPD+AFPR+N F
Sbjct: 105 NYVLPLQIGAPDVAFPRLNAFGF 127
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 63.3 bits (147), Expect = 5e-09
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 5/52 (9%)
Frame = +2
Query: 500 IINDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
++ +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G++S
Sbjct: 214 LLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVS 265
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 62.9 bits (146), Expect = 6e-09
Identities = 26/44 (59%), Positives = 32/44 (72%)
Frame = +2
Query: 509 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
DRN T FFD A GG P+L+QHLF F HP VY+++LP GI+S
Sbjct: 248 DRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 62.1 bits (144), Expect = 1e-08
Identities = 24/44 (54%), Positives = 34/44 (77%)
Frame = +2
Query: 509 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S
Sbjct: 168 DKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYS 211
Score = 41.1 bits (92), Expect = 0.022
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 8 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 172
PG + D + YN ++T H N L+PL++GA D+AFPR+N
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLN 56
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 5/51 (9%)
Frame = +2
Query: 500 IINDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEVYILILPGFGII 637
++ DR+ T FF GGGDPIL+QHLF FGHPEVYI+ILP +GI+
Sbjct: 242 LLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVYIMILPAWGIL 292
Score = 34.3 bits (75), Expect = 2.6
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +2
Query: 38 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 184
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSF 134
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 61.7 bits (143), Expect = 1e-08
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +2
Query: 509 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
+R+ FF GGDP+L+QHLF FFGHPEVYI+ LP G++S
Sbjct: 238 ERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLVS 281
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +2
Query: 539 PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 643
P GGG +L+QHLF FFGHPEVYI ILP GI+SH
Sbjct: 270 PHGGGSALLWQHLFWFFGHPEVYIAILPAMGIVSH 304
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 60.5 bits (140), Expect = 3e-08
Identities = 27/44 (61%), Positives = 30/44 (68%)
Frame = +2
Query: 509 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
DR +FF+ GG + YQHLF FGHPEVYILILP GIIS
Sbjct: 232 DRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIIS 275
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 60.1 bits (139), Expect = 4e-08
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +2
Query: 509 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 622
+R + FFDP GGDP+L+QHLF FGHPEVYI+ LP
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLP 291
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 60.1 bits (139), Expect = 4e-08
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +2
Query: 509 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
+R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++
Sbjct: 254 ERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVA 297
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 59.3 bits (137), Expect = 8e-08
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +2
Query: 503 INDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 619
I DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 216 IFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
Score = 56.8 bits (131), Expect = 4e-07
Identities = 36/94 (38%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +2
Query: 5 NPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 178
N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+NNI
Sbjct: 47 NTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNI 106
Query: 179 RFXXXXXXXXXXXXXXIVENGAGTG*QFTPHFHL 280
F +VE GAGTG +T +F L
Sbjct: 107 SFWLLVPSLILILTSALVEAGAGTG--WTVYFPL 138
Score = 47.2 bits (107), Expect = 3e-04
Identities = 27/66 (40%), Positives = 34/66 (51%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVY PL+ +H G +VDLAIFSLHL+G SS ++ +PLF
Sbjct: 133 TVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAW 192
Query: 436 AVGITA 453
AV TA
Sbjct: 193 AVLFTA 198
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +2
Query: 509 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
+R + FF GGDP+L+QHLF FFGHPEVYI+ LP G++S
Sbjct: 297 ERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVS 340
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/44 (59%), Positives = 31/44 (70%)
Frame = +2
Query: 509 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
DR FF A GDPIL+QHLF FFGHPEVYI+ +P G++S
Sbjct: 235 DRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMVS 277
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 58.8 bits (136), Expect = 1e-07
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +2
Query: 533 FDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
FDPA GGDP+L+QH F F+ HP VYI++LP +IS
Sbjct: 239 FDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVIS 274
Score = 43.2 bits (97), Expect = 0.006
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +2
Query: 8 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 187
PG I D YN + T H N L+P+++GA D+AFP++N + F
Sbjct: 67 PGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNLLSF- 125
Query: 188 XXXXXXXXXXXXXIVENGAGTG*QF-TPH 271
+V+ GA TG F TP+
Sbjct: 126 YVYLAGAVVALFGMVQGGADTGWTFYTPY 154
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 PGSLI--GDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 181
PG+ I G+ Q+YN ++TAHA N VP+++G+PD+AFPR+NNI
Sbjct: 46 PGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGSPDMAFPRLNNIS 105
Query: 182 FXXXXXXXXXXXXXXIVENGAGTG 253
F +VE G G+G
Sbjct: 106 FWLLPPSLLLLLSSALVEVGCGSG 129
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 58.8 bits (136), Expect = 1e-07
Identities = 33/84 (39%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 PGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 181
PGS L G+ Q++N +V HA N L+PL++GA D AFPRINNI
Sbjct: 43 PGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIA 102
Query: 182 FXXXXXXXXXXXXXXIVENGAGTG 253
F +VE+GAGTG
Sbjct: 103 FWVLPMGLVCLVTSTLVESGAGTG 126
Score = 58.4 bits (135), Expect = 1e-07
Identities = 33/67 (49%), Positives = 38/67 (56%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVYPPLSS AH G SVDLAIF+LHL ISS + +LPLFV
Sbjct: 128 TVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVW 187
Query: 436 AVGITAF 456
++ ITAF
Sbjct: 188 SIFITAF 194
Score = 57.2 bits (132), Expect = 3e-07
Identities = 24/40 (60%), Positives = 31/40 (77%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 619
++ DRN NTSFF+ +GGGDPILY+HLF FFG I++L
Sbjct: 210 LLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 58.4 bits (135), Expect = 1e-07
Identities = 25/53 (47%), Positives = 36/53 (67%)
Frame = +2
Query: 479 FSWSYYNIINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 637
F+ + ++ DR + FF+PA GGDPI Y HLF F HPEVY+L++P G++
Sbjct: 204 FAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMM 256
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 58.0 bits (134), Expect = 2e-07
Identities = 25/44 (56%), Positives = 30/44 (68%)
Frame = +2
Query: 509 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
+R + FF A GGD +L+QHLF FGHPEVYI+ LP G IS
Sbjct: 228 ERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAIS 271
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 58.0 bits (134), Expect = 2e-07
Identities = 21/47 (44%), Positives = 35/47 (74%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
++ +R + S+F+PA GGDP+L+Q F F+ HP VY+++LP GI++
Sbjct: 219 VLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILA 265
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 38 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 172
YN I+T H N +VPL+LGA D+A PR+N
Sbjct: 66 YNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRVN 110
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/48 (56%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Frame = +2
Query: 500 IINDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
++ DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++
Sbjct: 218 LLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMA 263
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 56.4 bits (130), Expect = 6e-07
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +2
Query: 509 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
+R FF A GGD +L+QHLF FGHPEVYI+ LP G IS
Sbjct: 228 ERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAIS 271
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 56.4 bits (130), Expect = 6e-07
Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +2
Query: 5 NPGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNI 178
N GS L G+ Q +N ++TAHA N L+PL+LGA D+AF R+NNI
Sbjct: 47 NTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNI 106
Query: 179 RFXXXXXXXXXXXXXXIVENGAGTG 253
F +VE GAGTG
Sbjct: 107 SFWLLVPSLILILTSALVEAGAGTG 131
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 56.4 bits (130), Expect = 6e-07
Identities = 29/79 (36%), Positives = 40/79 (50%)
Frame = +2
Query: 17 LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXX 196
L G++Q++N +V HA N ++PL++GA D AFPRINNI F
Sbjct: 48 LHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFPRINNIGFWLLP 107
Query: 197 XXXXXXXXXXIVENGAGTG 253
+VE+GAGTG
Sbjct: 108 MGLVCLVTSTLVESGAGTG 126
Score = 56.0 bits (129), Expect = 7e-07
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFG 592
++ DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 210 LLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/66 (46%), Positives = 37/66 (56%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVYPPL+S AH G SVDLAIF+LH+ ISS + +LPLFV
Sbjct: 128 TVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVW 187
Query: 436 AVGITA 453
A+ ITA
Sbjct: 188 AILITA 193
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 55.2 bits (127), Expect = 1e-06
Identities = 26/49 (53%), Positives = 32/49 (65%)
Frame = +2
Query: 494 YNIINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
+ I DR L+T F+ GG +LY +L +GHPEVYILILP FGI S
Sbjct: 246 FQIFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFS 294
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 55.2 bits (127), Expect = 1e-06
Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 10/57 (17%)
Frame = +2
Query: 500 IINDRNLNTSFFDP----AG------GGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
+I DR+L TSFF AG GG P+L+QHLF F GHPEVYI+++P GI S
Sbjct: 261 LIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLGHPEVYIVLIPALGITS 317
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 11/60 (18%)
Frame = +2
Query: 494 YNIINDRNLNTSFFDP-----------AGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
+ ++ DR + T FF P AGGG P+L+QHLF F+ HP VYI+ILP G++S
Sbjct: 245 FMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLFWFYSHPAVYIMILPAMGMVS 304
Score = 35.9 bits (79), Expect = 0.84
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 32 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 184
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSY 136
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLFV
Sbjct: 145 TLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVW 204
Query: 436 AVGITA 453
+V ITA
Sbjct: 205 SVLITA 210
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/42 (54%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGH--PEVYILIL 619
++ DRN NTSFF +GGGDP+LY+H+F FFG P + I+I+
Sbjct: 227 LLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIWPIIIIIII 268
Score = 53.2 bits (122), Expect = 5e-06
Identities = 27/83 (32%), Positives = 40/83 (48%)
Frame = +2
Query: 5 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 184
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 185 XXXXXXXXXXXXXXIVENGAGTG 253
+++ G G+G
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSG 143
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/66 (42%), Positives = 39/66 (59%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLFV
Sbjct: 145 TLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVW 204
Query: 436 AVGITA 453
+V ITA
Sbjct: 205 SVLITA 210
Score = 53.2 bits (122), Expect = 5e-06
Identities = 27/83 (32%), Positives = 40/83 (48%)
Frame = +2
Query: 5 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 184
NP L+ + Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 185 XXXXXXXXXXXXXXIVENGAGTG 253
+++ G G+G
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSG 143
Score = 46.4 bits (105), Expect = 6e-04
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 634
++ DRN NTSFF +GGGDP+LY+H+ F+ +P V ILI GI
Sbjct: 227 LLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VLILIWLTSGI 268
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = +2
Query: 509 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS
Sbjct: 275 DRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFIS 318
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 53.2 bits (122), Expect = 5e-06
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +2
Query: 509 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S
Sbjct: 256 DRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFS 299
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 52.8 bits (121), Expect = 7e-06
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +2
Query: 509 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S
Sbjct: 257 DRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFS 300
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 52.8 bits (121), Expect = 7e-06
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 509 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 637
D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++
Sbjct: 212 DKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMV 254
Score = 36.7 bits (81), Expect = 0.48
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 11 GSLIGDD-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRIN 172
G I DD +YNT + H N +PL++GA D+AFPR+N
Sbjct: 47 GPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPRVN 101
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 52.8 bits (121), Expect = 7e-06
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = +2
Query: 509 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
DR FF GG P+L+ +LF +GHPEVYI+ILP FGI S
Sbjct: 252 DRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFS 295
Score = 34.7 bits (76), Expect = 1.9
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +2
Query: 8 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 184
P + D YN I T H N +VPL +GA D+AFP +NN+ F
Sbjct: 85 PNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAFPYLNNLSF 142
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 52.4 bits (120), Expect = 9e-06
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 PGS--LIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 181
PG+ L G+ Q++N +V HA N L+PL++GA D++F R+NNI
Sbjct: 43 PGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFARLNNIS 102
Query: 182 FXXXXXXXXXXXXXXIVENGAGTG 253
F +VE+GAGTG
Sbjct: 103 FWLLPPALVCLVTSTLVESGAGTG 126
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = +2
Query: 509 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
DR L+ FF GG+ + + ++F FGHPEVYILILP FG+ S
Sbjct: 276 DRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYS 319
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 50.4 bits (115), Expect = 4e-05
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +2
Query: 545 GGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
GGG P+L+QHLF F+ HP VYI++LP G++S
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVS 307
Score = 34.7 bits (76), Expect = 1.9
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 32 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 184
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSY 140
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 50.4 bits (115), Expect = 4e-05
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 348
TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 22 TVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 49.6 bits (113), Expect = 6e-05
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +2
Query: 518 LNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 634
L S F+P GG P+LYQ F F+ HP VY+++LP GI
Sbjct: 233 LGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGI 271
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 48.0 bits (109), Expect = 2e-04
Identities = 37/113 (32%), Positives = 43/113 (38%)
Frame = +1
Query: 256 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 435
TVYPPLSS AH G SVDLAI+S I+ +F + +
Sbjct: 43 TVYPPLSSGTAHAGASVDLAIYS---TVINMRSAGITLDRFFFTFSSNFLNFSITFICMI 99
Query: 436 AVGITAFXXXXXXXXXXXXXQYY*RSKLKYIIF*SCWRRRPNFISTFILIFWT 594
F K KY IF W P +STFILIFWT
Sbjct: 100 CCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +2
Query: 131 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 253
L+LGAPD+AFPR+NN+ F +VENGAGTG
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTG 41
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 584 FFGHPEVYILILPGFGIISH 643
FFGHPEVYILILPGFG+ISH
Sbjct: 2 FFGHPEVYILILPGFGMISH 21
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 46.4 bits (105), Expect = 6e-04
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = +1
Query: 259 VYPPLSSNIAHRGRSVDLAIFSLHLAGISS 348
VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 118 VYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
Score = 32.7 bits (71), Expect = 7.8
Identities = 21/58 (36%), Positives = 26/58 (44%)
Frame = +2
Query: 11 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 184
G +IG QI VTA A L PL +GAP +A PR+ N+ F
Sbjct: 35 GQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRLXNMSF 92
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 44.0 bits (99), Expect = 0.003
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +2
Query: 584 FFGHPEVYILILPGFGIISH 643
FFGHPEVY+LILP FGI+SH
Sbjct: 1 FFGHPEVYVLILPVFGIVSH 20
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 43.2 bits (97), Expect = 0.006
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +2
Query: 536 DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 640
D G +L+ HLF FFGHPEVYI+ P G+++
Sbjct: 243 DADNPGASLLWAHLFWFFGHPEVYIVFFPALGVMA 277
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 42.3 bits (95), Expect = 0.010
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2
Query: 500 IINDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 619
+++DRN N FF GG PIL+Q++ FGH +V LIL
Sbjct: 42 LLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTDVLFLIL 81
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 41.9 bits (94), Expect = 0.013
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = +2
Query: 551 GDPILYQHLF*FFGHPEVYILILPGFG 631
G +++++LF +FGHPEVY+L+LPG G
Sbjct: 255 GGALMWENLFWYFGHPEVYLLLLPGTG 281
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 40.7 bits (91), Expect = 0.029
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +1
Query: 571 TFILIFWTS*SLYFNFTRIWYNFSY 645
+ ++IFW+S SLYFN IWYNF Y
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPY 26
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 36.3 bits (80), Expect = 0.63
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 527 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 634
S F G P+ Y F F HPEVY+ ILP F I
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAI 346
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 33.9 bits (74), Expect = 3.4
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 548 GGDPILYQHLF*FFGHPEVYILILPGF 628
G DP+L + LF F GHP VY +LP +
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAY 250
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 33.9 bits (74), Expect = 3.4
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 599 EVYILILPGFGIISH 643
EVYILILPGFG+ISH
Sbjct: 155 EVYILILPGFGMISH 169
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 33.5 bits (73), Expect = 4.5
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 554 DPILYQHLF*FFGHPEVYILILPGF 628
+P+L + LF FFGHP VY +LP +
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAY 233
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,373,973
Number of Sequences: 1657284
Number of extensions: 8146212
Number of successful extensions: 15946
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 14920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15753
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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