Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1062
(533 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 159 3e-38
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 157 1e-37
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 149 5e-35
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 112 6e-24
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 110 2e-23
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 107 2e-22
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 103 3e-21
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 99 7e-20
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 97 2e-19
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 93 4e-18
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 93 5e-18
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 89 6e-17
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 87 2e-16
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 84 2e-15
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 83 5e-15
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 74 2e-12
UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|R... 71 2e-11
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 59 5e-08
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 57 3e-07
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 56 5e-07
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 56 5e-07
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 55 1e-06
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 54 2e-06
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 54 2e-06
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 54 2e-06
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 53 5e-06
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 52 8e-06
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 51 2e-05
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 51 2e-05
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 50 3e-05
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 50 3e-05
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 49 8e-05
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 48 1e-04
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 47 2e-04
UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria ro... 46 4e-04
UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1; ... 46 7e-04
UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria gr... 46 7e-04
UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus C... 45 0.001
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 45 0.001
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 45 0.001
UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3; Phaeophyceae... 44 0.002
UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1; Thraustochyt... 44 0.003
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 43 0.004
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 43 0.005
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 43 0.005
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 43 0.005
UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondri... 42 0.007
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 42 0.007
UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole geno... 42 0.012
UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3; Dictyostelii... 42 0.012
UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2; ... 40 0.036
UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas d... 40 0.047
UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 - Ba... 40 0.047
UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae ... 39 0.062
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 39 0.062
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 39 0.062
UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymu... 39 0.083
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 39 0.083
UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8... 39 0.083
UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.083
UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1; Medi... 38 0.11
UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288, w... 38 0.14
UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma j... 38 0.14
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 38 0.14
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 38 0.19
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 38 0.19
UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5; Tetrahymena|... 37 0.25
UniRef50_Q5Z7Q8 Cluster: Putative uncharacterized protein OSJNBa... 37 0.33
UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.44
UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;... 36 0.44
UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2... 36 0.58
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 35 1.0
UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE454... 35 1.0
UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2, mitoch... 35 1.3
UniRef50_Q7WEV5 Cluster: Rod shape-determining protein; n=4; Bor... 35 1.3
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome s... 34 1.8
UniRef50_Q4MYC0 Cluster: Ribosomal protein L2, putative; n=1; Th... 34 1.8
UniRef50_Q25807 Cluster: Rpl2 protein; n=2; Plasmodium|Rep: Rpl2... 34 1.8
UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial... 34 1.8
UniRef50_UPI00006A2927 Cluster: UPI00006A2927 related cluster; n... 34 2.3
UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1; ... 33 4.1
UniRef50_Q9Z543 Cluster: Putative DNA-binding protein; n=1; Stre... 33 5.4
UniRef50_Q8HIS1 Cluster: Ribosomal protein L29; n=1; Monosiga br... 33 5.4
UniRef50_Q8CM44 Cluster: DNA gyrase subunit A; n=4; Leptospira|R... 32 7.2
UniRef50_Q72AL2 Cluster: Putative uncharacterized protein; n=2; ... 32 7.2
UniRef50_A3UWP9 Cluster: Putative uncharacterized protein; n=3; ... 32 7.2
UniRef50_A7PDE5 Cluster: Chromosome chr17 scaffold_12, whole gen... 32 7.2
UniRef50_Q2H7W8 Cluster: Putative uncharacterized protein; n=1; ... 32 7.2
UniRef50_Q0CD71 Cluster: Predicted protein; n=3; Trichocomaceae|... 32 7.2
UniRef50_UPI0000E48847 Cluster: PREDICTED: similar to titin isof... 32 9.5
UniRef50_A4ECN1 Cluster: Putative uncharacterized protein; n=1; ... 32 9.5
UniRef50_A3JMF2 Cluster: Glycosyl transferase, family 2; n=1; Rh... 32 9.5
UniRef50_O62370 Cluster: Putative uncharacterized protein; n=1; ... 32 9.5
UniRef50_Q6CPX1 Cluster: Similar to sp|Q03823 Saccharomyces cere... 32 9.5
UniRef50_A6REP2 Cluster: Predicted protein; n=1; Ajellomyces cap... 32 9.5
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 159 bits (387), Expect = 3e-38
Identities = 72/75 (96%), Positives = 73/75 (97%)
Frame = +1
Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 435
GGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA
Sbjct: 172 GGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 231
Query: 436 GRKVGLIAARRTGRL 480
GRKVGLIAARRTGR+
Sbjct: 232 GRKVGLIAARRTGRI 246
Score = 151 bits (365), Expect = 1e-35
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = +2
Query: 2 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 181
FVYCG+KATL++GNVMP+ MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D K+T
Sbjct: 87 FVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKT 146
Query: 182 RVKLPSGAKKVLPSSNRGMVGIVA 253
RVKLPSGAKKV+PS+NR MVGIVA
Sbjct: 147 RVKLPSGAKKVVPSANRAMVGIVA 170
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 157 bits (382), Expect = 1e-37
Identities = 70/75 (93%), Positives = 72/75 (96%)
Frame = +1
Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 435
GGRIDKP+LKAGRAYHKYK KRNCWP VRGVAMNPVEHPHGGGNHQHIGKASTV+R TSA
Sbjct: 148 GGRIDKPMLKAGRAYHKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVRRDTSA 207
Query: 436 GRKVGLIAARRTGRL 480
GRKVGLIAARRTGRL
Sbjct: 208 GRKVGLIAARRTGRL 222
Score = 87.0 bits (206), Expect = 2e-16
Identities = 39/59 (66%), Positives = 49/59 (83%)
Frame = +2
Query: 77 IVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVA 253
I C + + RG+LARASGN+ATVI HNPD K++RVKLPSG+KKV+PS+NR +VGIVA
Sbjct: 88 IYCGKKANLQIRGKLARASGNYATVISHNPDTKKSRVKLPSGSKKVIPSANRAIVGIVA 146
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 149 bits (360), Expect = 5e-35
Identities = 66/75 (88%), Positives = 68/75 (90%)
Frame = +1
Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 435
GGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R A
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPA 231
Query: 436 GRKVGLIAARRTGRL 480
GRKVGLIAARRTGRL
Sbjct: 232 GRKVGLIAARRTGRL 246
Score = 144 bits (348), Expect = 1e-33
Identities = 64/84 (76%), Positives = 75/84 (89%)
Frame = +2
Query: 2 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 181
FVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+T
Sbjct: 87 FVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKT 146
Query: 182 RVKLPSGAKKVLPSSNRGMVGIVA 253
RVKLPSG+KKV+ S+NR +VG+VA
Sbjct: 147 RVKLPSGSKKVISSANRAVVGVVA 170
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 112 bits (269), Expect = 6e-24
Identities = 52/73 (71%), Positives = 57/73 (78%)
Frame = +1
Query: 259 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 438
GRI+KPI+KAG AYHK+KVK WP VRGVAMN V+HP GGG HQH G+ STV R G
Sbjct: 163 GRIEKPIMKAGFAYHKWKVKARKWPRVRGVAMNAVDHPFGGGRHQHKGRPSTVARTAPPG 222
Query: 439 RKVGLIAARRTGR 477
RKVG IAARRTGR
Sbjct: 223 RKVGHIAARRTGR 235
Score = 72.5 bits (170), Expect = 5e-12
Identities = 35/80 (43%), Positives = 53/80 (66%)
Frame = +2
Query: 14 GKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 193
G A E GN++P+G +PEGT V N+E + GD G+LAR +G++A V+G +T ++L
Sbjct: 83 GPAAKPEAGNILPLGKIPEGTEVFNVELRPGDGGKLARQAGSYALVVGR--AGAKTILRL 140
Query: 194 PSGAKKVLPSSNRGMVGIVA 253
PSG K +P+ +R +GI A
Sbjct: 141 PSGKDKEVPNDSRATIGIPA 160
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 110 bits (264), Expect = 2e-23
Identities = 45/69 (65%), Positives = 58/69 (84%)
Frame = +2
Query: 2 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 181
++YCG KA+L +GNV+P+G PEGT+VCN+E K GDRG +ARASGN+ATVI HN D + T
Sbjct: 78 YIYCGSKASLHIGNVLPIGQCPEGTVVCNVESKPGDRGIIARASGNYATVISHNADNETT 137
Query: 182 RVKLPSGAK 208
R++LPSGAK
Sbjct: 138 RIRLPSGAK 146
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 107 bits (256), Expect = 2e-22
Identities = 49/74 (66%), Positives = 54/74 (72%)
Frame = +1
Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 435
GG +KP+LKAG Y KYKVK WP+VRGVAMN V HPHGGG HQ + + STV R
Sbjct: 161 GGVTEKPLLKAGNNYWKYKVKAKKWPHVRGVAMNAVSHPHGGGLHQSVSRPSTVSRNAPP 220
Query: 436 GRKVGLIAARRTGR 477
GRKVG IAARRTGR
Sbjct: 221 GRKVGHIAARRTGR 234
Score = 67.7 bits (158), Expect = 2e-10
Identities = 33/83 (39%), Positives = 51/83 (61%)
Frame = +2
Query: 5 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 184
+ GK A + GN++ VG +PEGTI+ N+E+ GD G+ AR++G + V+G D +
Sbjct: 79 IQIGKNAAISNGNIVEVGNVPEGTIISNIEKTRGDGGKFARSAGTYGVVVGKTGD--KVL 136
Query: 185 VKLPSGAKKVLPSSNRGMVGIVA 253
VKL S + S+ R +VG+VA
Sbjct: 137 VKLSSEKIAQVSSNARAIVGVVA 159
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 103 bits (247), Expect = 3e-21
Identities = 49/83 (59%), Positives = 58/83 (69%)
Frame = +1
Query: 259 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 438
GR +KP+LKAG AY+K+K K WP VRGVAMN V HPHGGGNHQ G +TV R G
Sbjct: 167 GRDEKPLLKAGNAYYKWKAKAKKWPVVRGVAMNAVNHPHGGGNHQSPGYPTTVARNAPPG 226
Query: 439 RKVGLIAARRTGRLWRQDRYKEG 507
+KVG IAAR TGR +Q + + G
Sbjct: 227 QKVGHIAARCTGRGCKQAKARLG 249
Score = 60.5 bits (140), Expect = 2e-08
Identities = 31/83 (37%), Positives = 51/83 (61%)
Frame = +2
Query: 5 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 184
V G A GN++P+ A+PEGT + N+E + GD G+LAR+ G +A ++G + ++
Sbjct: 84 VQIGPNAAPVNGNILPLYAIPEGTQIFNVEIRPGDGGKLARSGGAYAILVGKSGNS--AI 141
Query: 185 VKLPSGAKKVLPSSNRGMVGIVA 253
++LPSG K + + R +GI A
Sbjct: 142 IQLPSGKVKQVNAKARATIGIAA 164
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 98.7 bits (235), Expect = 7e-20
Identities = 44/74 (59%), Positives = 54/74 (72%)
Frame = +1
Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 435
GG+ +KP +KAG+ Y+ + K WP VRGVAMN V+HP GGGNHQ GK +T+ RG
Sbjct: 166 GGKREKPFVKAGKKYYHMRSKGGKWPKVRGVAMNAVDHPFGGGNHQSPGKPTTIARGDPP 225
Query: 436 GRKVGLIAARRTGR 477
GRKVG IAAR+TGR
Sbjct: 226 GRKVGHIAARKTGR 239
Score = 69.3 bits (162), Expect = 5e-11
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +2
Query: 5 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 184
+ CG A ++ GN +P+ +PEG + N+E + GD G+ ARA G +AT+I H D RT
Sbjct: 84 IECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQPGDGGKFARAPGCYATIIAH--DVGRTY 141
Query: 185 VKLPSGAKKVLPSSNRGMVGIVA 253
V+LPSG + R +G+++
Sbjct: 142 VQLPSGKVRTFDPRCRATIGVMS 164
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 97.1 bits (231), Expect = 2e-19
Identities = 45/74 (60%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Frame = +1
Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTV-KRGTS 432
GG DKP+LKA A++K K + + +P VRGVAMNPVEH HGGGNHQH+GK +TV K+ S
Sbjct: 158 GGIHDKPLLKASVAHYKAKARGHVFPRVRGVAMNPVEHIHGGGNHQHVGKPTTVSKKDIS 217
Query: 433 AGRKVGLIAARRTG 474
+K+GL+ ARRTG
Sbjct: 218 QEQKIGLVGARRTG 231
Score = 64.5 bits (150), Expect = 1e-09
Identities = 28/83 (33%), Positives = 48/83 (57%)
Frame = +2
Query: 5 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 184
+ G A +++GN+ + +PEG V ++E GD G A +G+++ V+ H + T
Sbjct: 74 ILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVNHRKETNETV 133
Query: 185 VKLPSGAKKVLPSSNRGMVGIVA 253
+K+PSG K + S R +VG+VA
Sbjct: 134 IKIPSGKKLTVSSECRCIVGVVA 156
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 93.1 bits (221), Expect = 4e-18
Identities = 43/72 (59%), Positives = 51/72 (70%)
Frame = +1
Query: 259 GRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 438
GR+D+P LKAG+ YHK K + +P V VAMNP +HP GGG +H GK +TV R G
Sbjct: 164 GRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKHPGKPTTVSRNAPPG 223
Query: 439 RKVGLIAARRTG 474
RKVGLIAARRTG
Sbjct: 224 RKVGLIAARRTG 235
Score = 79.8 bits (188), Expect = 4e-14
Identities = 38/83 (45%), Positives = 54/83 (65%)
Frame = +2
Query: 5 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 184
+ CG A ++ GN++P+G +PEG +CN+E K D G+ R+SG +ATV+ H +A RT
Sbjct: 81 IECGDDAEVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVRSSGVYATVVTH--EATRTA 138
Query: 185 VKLPSGAKKVLPSSNRGMVGIVA 253
V +PSG K L R +VGIVA
Sbjct: 139 VSMPSGNIKWLNPKCRAVVGIVA 161
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 92.7 bits (220), Expect = 5e-18
Identities = 41/74 (55%), Positives = 53/74 (71%)
Frame = +1
Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 435
GG+ +KP+LKAG+ Y+K+K +P V+ + HPHGGGNHQHIG STV R +
Sbjct: 198 GGKYEKPLLKAGKNYYKFKSLNKKYPIVKIFYLGKENHPHGGGNHQHIGHPSTVSRRSPP 257
Query: 436 GRKVGLIAARRTGR 477
G+KVGLIAARR+GR
Sbjct: 258 GQKVGLIAARRSGR 271
Score = 77.8 bits (183), Expect = 1e-13
Identities = 37/83 (44%), Positives = 53/83 (63%)
Frame = +2
Query: 5 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 184
+ CG +A GNV+P+ +P G VCN+EEK GD G+LAR++G F V+ H+ T+
Sbjct: 114 IACGLQARPITGNVLPLFNIPNGVFVCNVEEKEGDGGKLARSAGAFVGVLSHSKYNNVTK 173
Query: 185 VKLPSGAKKVLPSSNRGMVGIVA 253
+KLPS K+L S R +G+VA
Sbjct: 174 LKLPSKKIKILSSFCRATIGVVA 196
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 89.0 bits (211), Expect = 6e-17
Identities = 40/80 (50%), Positives = 52/80 (65%)
Frame = +1
Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 435
GG ++P + AG + +K K +P VRGVA HPHGGG HQH+G++STV R T
Sbjct: 164 GGASERPFMSAGGKWRNFKAKGKKYPIVRGVAQAAYVHPHGGGRHQHVGQSSTVSRDTPP 223
Query: 436 GRKVGLIAARRTGRLWRQDR 495
G KVG IAAR+TGR ++R
Sbjct: 224 GAKVGSIAARKTGRARIKER 243
Score = 71.3 bits (167), Expect = 1e-11
Identities = 34/80 (42%), Positives = 49/80 (61%)
Frame = +2
Query: 14 GKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 193
G K+ +E GNV+ + +P+GTIVCN+E+ GD G + +++G ATV H + VKL
Sbjct: 85 GLKSKIEKGNVISIQNIPDGTIVCNIEKHFGDGGAIVKSAGTDATVFSHGDEG--VTVKL 142
Query: 194 PSGAKKVLPSSNRGMVGIVA 253
PSG L NR M+G +A
Sbjct: 143 PSGKFTTLNPKNRAMIGTLA 162
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 87.0 bits (206), Expect = 2e-16
Identities = 39/80 (48%), Positives = 52/80 (65%)
Frame = +1
Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 435
GG ++P + AG + +++ K +P VRGVA HPHGGG HQH+G++STV R
Sbjct: 163 GGVSERPFMSAGGKWRRFRSKGRKYPIVRGVAQAAYVHPHGGGRHQHVGQSSTVSRNAPP 222
Query: 436 GRKVGLIAARRTGRLWRQDR 495
G KVG IAAR+TGR +DR
Sbjct: 223 GAKVGSIAARKTGRAKIKDR 242
Score = 64.1 bits (149), Expect = 2e-09
Identities = 33/80 (41%), Positives = 46/80 (57%)
Frame = +2
Query: 14 GKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 193
G K+ + GNV+ V +P+GT VCN+E+ GD G + +++G ATV H +KL
Sbjct: 84 GLKSEIRDGNVISVQNIPDGTTVCNVEKHYGDGGAIVKSAGGNATVFSHGEGG--VVLKL 141
Query: 194 PSGAKKVLPSSNRGMVGIVA 253
PSG L NR MVG +A
Sbjct: 142 PSGRFSTLNPKNRAMVGTLA 161
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 83.8 bits (198), Expect = 2e-15
Identities = 42/71 (59%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = +1
Query: 259 GRIDKPILKAGRAYHKYKVKRNCWPY-VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 435
G ID PILKAG H + K PY VRGVAMN V HPHGGGNHQH+G+ STV R
Sbjct: 158 GIIDAPILKAGTHVHYLRSKAKR-PYTVRGVAMNAVNHPHGGGNHQHVGRPSTVGRNAPP 216
Query: 436 GRKVGLIAARR 468
GRKVG ++ +R
Sbjct: 217 GRKVGRLSPKR 227
Score = 56.4 bits (130), Expect = 4e-07
Identities = 32/104 (30%), Positives = 48/104 (46%)
Frame = +2
Query: 5 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 184
+ G T+ G + +P+G+ V N+E GD G R++G FA V+ H R
Sbjct: 76 IVAGNVDTINPGTTTVLANIPDGSYVYNIESSPGDGGEFCRSAGTFALVVSH---GSRVT 132
Query: 185 VKLPSGAKKVLPSSNRGMVGIVAEVDVLTNLF*KLEGHTTSTRS 316
+KLPSG+ + R VG+VA ++ K H RS
Sbjct: 133 LKLPSGSMRDFDPRCRATVGVVAASGIIDAPILKAGTHVHYLRS 176
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 82.6 bits (195), Expect = 5e-15
Identities = 38/83 (45%), Positives = 55/83 (66%)
Frame = +2
Query: 5 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 184
V GK A+ + GN+M +G +PEGT++ N+E++ GD G+ ARA G +A VIG P+ +T
Sbjct: 80 VEIGKGASPKTGNIMILGEIPEGTMIFNVEKRAGDGGKFARAGGTYAVVIGQKPEENKTI 139
Query: 185 VKLPSGAKKVLPSSNRGMVGIVA 253
++LPSG + S R VGIVA
Sbjct: 140 IRLPSGRTVEVDSRGRATVGIVA 162
Score = 81.8 bits (193), Expect = 9e-15
Identities = 39/74 (52%), Positives = 50/74 (67%)
Frame = +1
Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 435
GGRI+KP LKAG+ YH+ + K +P VRG AM+P HPHGGG+HQ G + V +
Sbjct: 164 GGRIEKPFLKAGKKYHRARAKAWKYPTVRGKAMSPYAHPHGGGSHQKGG--TPVPKTAPP 221
Query: 436 GRKVGLIAARRTGR 477
G+KVG I +R TGR
Sbjct: 222 GQKVGFIGSRCTGR 235
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 73.7 bits (173), Expect = 2e-12
Identities = 34/74 (45%), Positives = 42/74 (56%)
Frame = +1
Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 435
GGR +KP +KAG Y+ + WP V GV N +HP GG H + K TV +
Sbjct: 163 GGRKEKPFVKAGNKYYWASSRNRHWPVVNGVKKNASDHPFGGKRHSNHSKPFTVSKWAPP 222
Query: 436 GRKVGLIAARRTGR 477
GRKVG I AR+TGR
Sbjct: 223 GRKVGYIGARKTGR 236
Score = 68.5 bits (160), Expect = 9e-11
Identities = 34/83 (40%), Positives = 53/83 (63%)
Frame = +2
Query: 5 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 184
VY GK+A +G++ P+ +PEGT + LE GD G+L RASG+FA ++ D +
Sbjct: 81 VYYGKEAPNAIGSIKPLSEIPEGTKIYMLENNPGDGGKLVRASGDFALLVQKLGD--KVI 138
Query: 185 VKLPSGAKKVLPSSNRGMVGIVA 253
V+LPSG K L ++ R ++G++A
Sbjct: 139 VQLPSGQFKTLSANARAVIGVIA 161
>UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|Rep:
Ribosomal protein L8 - Sus scrofa (Pig)
Length = 106
Score = 70.9 bits (166), Expect = 2e-11
Identities = 33/73 (45%), Positives = 47/73 (64%)
Frame = -3
Query: 468 PASSNKTNFATSRCSSLDSGSLTYMLMVTTTVRMLYRVHGNTTYIWPAVTFDLVLVVCPS 289
PASSN+T+F SR S D +L+V T+ ML+RVHG+T + WPA+ L+LV+ +
Sbjct: 17 PASSNETHFPASRGISADGRGFANVLVVATSKGMLHRVHGHTPHAWPAIPLGLILVIGTA 76
Query: 288 SFQNRFVNTSTSA 250
QN VN +TS+
Sbjct: 77 GLQNGLVNAATSS 89
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 59.3 bits (137), Expect = 5e-08
Identities = 29/76 (38%), Positives = 45/76 (59%)
Frame = +2
Query: 35 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 214
VGN +P+ +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKL 418
Query: 215 LPSSNRGMVGIVAEVD 262
+ S R +GIV+ ++
Sbjct: 419 IDSRCRATIGIVSNLN 434
Score = 42.3 bits (95), Expect = 0.007
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1
Query: 331 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 417
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 453 PIVRGVAMNPVDHPHGGGEGRTKGGRPSV 481
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 56.8 bits (131), Expect = 3e-07
Identities = 29/82 (35%), Positives = 51/82 (62%)
Frame = +2
Query: 5 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 184
V G +A ++VGN +P+ +P GT++ N+E K G G+LAR++G A ++G + K
Sbjct: 116 VQSGAEADIKVGNALPLTNIPVGTVIHNIELKPGKGGQLARSAGTSAQLLG--KEGKYAI 173
Query: 185 VKLPSGAKKVLPSSNRGMVGIV 250
V+L SG +++ ++R +G V
Sbjct: 174 VRLSSGEVRLVLLTSRATIGTV 195
Score = 36.3 bits (80), Expect = 0.44
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +1
Query: 283 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 384
KAGR +++ KR P VRG MNP +HPHGGG
Sbjct: 207 KAGRT--RWQGKR---PTVRGSVMNPNDHPHGGG 235
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 56.0 bits (129), Expect = 5e-07
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +2
Query: 5 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 184
+ + A ++VGN P+ +PEGT++ N+E K G G++AR++G ++G + D K
Sbjct: 117 IVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQMARSAGTSVQILGKDDDGKYVT 176
Query: 185 VKLPSG-AKKVL 217
++L SG +KVL
Sbjct: 177 LRLTSGEVRKVL 188
Score = 39.5 bits (88), Expect = 0.047
Identities = 26/59 (44%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +1
Query: 310 KVKRNCW----PYVRGVAMNPVEHPHGGG-NHQHIGKASTVKRGTSAGRKVGLIAARRT 471
K RN W P VRG MNP +HPHGGG IG+ S V T G+K + R T
Sbjct: 210 KAGRNRWRGIRPTVRGSVMNPNDHPHGGGEGRTPIGRKSPV---TPWGKKALGVKTRNT 265
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 56.0 bits (129), Expect = 5e-07
Identities = 30/87 (34%), Positives = 49/87 (56%)
Frame = +2
Query: 5 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 184
+ G + +++GN +P+ MP GT + N+E +G G+LARA+G A +I + K
Sbjct: 114 IVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSAT 171
Query: 185 VKLPSGAKKVLPSSNRGMVGIVAEVDV 265
+KLPSG +++ + VG V V V
Sbjct: 172 LKLPSGEVRLISKNCSATVGQVGNVGV 198
Score = 41.5 bits (93), Expect = 0.012
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +1
Query: 325 CW----PYVRGVAMNPVEHPHGGG 384
CW P VRGV MNPV+HPHGGG
Sbjct: 210 CWLGKRPVVRGVVMNPVDHPHGGG 233
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 54.8 bits (126), Expect = 1e-06
Identities = 28/86 (32%), Positives = 49/86 (56%)
Frame = +2
Query: 5 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 184
V G ++ GN MP+ +MP GTI+ N+E G G++AR++G +A ++G D
Sbjct: 116 VVAGNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQIARSAGTYAQLVGR--DQGMAI 173
Query: 185 VKLPSGAKKVLPSSNRGMVGIVAEVD 262
++L SG ++++ + VG V+ D
Sbjct: 174 LRLNSGEQRLVSGACFASVGAVSNPD 199
Score = 44.8 bits (101), Expect = 0.001
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +1
Query: 283 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 402
KAGR+ ++ KR P+VRGVAMNPV+HPHGGG + G
Sbjct: 207 KAGRSV--WRGKR---PHVRGVAMNPVDHPHGGGEGRTSG 241
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/75 (30%), Positives = 46/75 (61%)
Frame = +2
Query: 29 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 208
++ GN +P+ +P G+I+ N+ G RG+L +A+G FA ++ +P+ K+ +KL SG
Sbjct: 212 MQRGNCLPLHMLPVGSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSGEH 271
Query: 209 KVLPSSNRGMVGIVA 253
+ + + +G+V+
Sbjct: 272 RYVHMNCHATLGVVS 286
Score = 40.3 bits (90), Expect = 0.027
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +1
Query: 283 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 384
KAGR+ H+ K P VRGVAMN +HPHGGG
Sbjct: 297 KAGRSRHRGKR-----PMVRGVAMNAFDHPHGGG 325
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 54.4 bits (125), Expect = 2e-06
Identities = 28/74 (37%), Positives = 44/74 (59%)
Frame = +2
Query: 29 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 208
++ GN MP+ +PEGTIV N+E G G++ARA+G +A V+G + V++PSG
Sbjct: 149 IKPGNAMPLKYIPEGTIVHNIEFIPGKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEV 208
Query: 209 KVLPSSNRGMVGIV 250
+++ VG V
Sbjct: 209 RMIHERCMATVGRV 222
Score = 41.9 bits (94), Expect = 0.009
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 331 PYVRGVAMNPVEHPHGGGNHQHIGK 405
P+ RG AMNPV+HPHGGG + GK
Sbjct: 245 PHTRGTAMNPVDHPHGGGEGRTRGK 269
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 54.0 bits (124), Expect = 2e-06
Identities = 29/75 (38%), Positives = 43/75 (57%)
Frame = +2
Query: 35 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 214
VGN + + +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 321 VGNCVSLANIPIGTWVHNIEWNPGQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKL 380
Query: 215 LPSSNRGMVGIVAEV 259
+ S R VGIV+ +
Sbjct: 381 IDSRCRATVGIVSNL 395
Score = 42.3 bits (95), Expect = 0.007
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1
Query: 331 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 417
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 415 PIVRGVAMNPVDHPHGGGEGRTKGGRPSV 443
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 52.8 bits (121), Expect = 5e-06
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI-GHNPDAKR 178
FV G + GN +P+ ++P GT+V N+E G G++ RA+G A +I HN K
Sbjct: 209 FVSSGPNVEIRTGNALPLISIPLGTLVHNIELYPGSGGQVVRAAGTSAQLIKKHN---KY 265
Query: 179 TRVKLPSGAKKVLPSSNRGMVGIVAEVD 262
++LPSG K P +GIV+ ++
Sbjct: 266 AILRLPSGELKSFPLQCMATIGIVSNLN 293
Score = 41.9 bits (94), Expect = 0.009
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +1
Query: 331 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 417
P VRGVAMNP++HPHGGG + G +V
Sbjct: 312 PTVRGVAMNPIDHPHGGGEGRTSGGRPSV 340
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 52.0 bits (119), Expect = 8e-06
Identities = 29/74 (39%), Positives = 45/74 (60%)
Frame = +2
Query: 32 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 211
+VGN +P+ GT V N+E + G G++ RA+G +A V+ P AK ++LPSGA+K
Sbjct: 295 KVGNCIPLANARIGTWVHNIECRPGQGGKMVRAAGTYAKVV-QEPGAKCV-LRLPSGAEK 352
Query: 212 VLPSSNRGMVGIVA 253
+ S +GIV+
Sbjct: 353 AVDSRCHATIGIVS 366
Score = 46.0 bits (104), Expect = 5e-04
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Frame = +1
Query: 331 PYVRGVAMNPVEHPHGGGNHQHIGKASTVK---RGTSAGRKVGLIAARR 468
P VRGVAMNPV+HPHGGG + G +V + T AG + +A+R+
Sbjct: 388 PVVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGYRSPSVASRK 436
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 50.8 bits (116), Expect = 2e-05
Identities = 24/72 (33%), Positives = 41/72 (56%)
Frame = +2
Query: 38 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 217
GN +P+ MP GT+V N+ + G G+L R++G FATVI ++ ++L SG +++
Sbjct: 213 GNCLPLHMMPVGTLVFNVGLRPGQGGQLCRSAGTFATVIAKERISQHVTIRLQSGEVRLI 272
Query: 218 PSSNRGMVGIVA 253
VG+ +
Sbjct: 273 HKDCCATVGVAS 284
Score = 37.9 bits (84), Expect = 0.14
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +1
Query: 322 NCWPYVRGVAMNPVEHPHGGGNHQHIG 402
N P VRG+AMN EHPHGGG + G
Sbjct: 303 NIRPTVRGLAMNAAEHPHGGGRGKSKG 329
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 50.8 bits (116), Expect = 2e-05
Identities = 28/74 (37%), Positives = 45/74 (60%)
Frame = +2
Query: 32 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 211
+VGN +P+ + GT V ++E G +LARA+G +A +I A + V+LPSG +K
Sbjct: 359 KVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEK 416
Query: 212 VLPSSNRGMVGIVA 253
++ S R +GIV+
Sbjct: 417 LIDSRCRATIGIVS 430
Score = 46.0 bits (104), Expect = 5e-04
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = +1
Query: 331 PYVRGVAMNPVEHPHGGGNHQHIGKASTVK---RGTSAGRKVGLIAARR 468
P VRGVAMNPV+HPHGGG + G +V + T AG + G+ +R
Sbjct: 452 PIVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGFRAGVGVGKR 500
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 50.4 bits (115), Expect = 3e-05
Identities = 23/79 (29%), Positives = 43/79 (54%)
Frame = +2
Query: 26 TLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGA 205
T + GN +P+ +P GTI+ N+ G+ R++G +A V+ P+ K+ V+L SG
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSGE 293
Query: 206 KKVLPSSNRGMVGIVAEVD 262
+ + +G+V+ +D
Sbjct: 294 HRYVSLEAVATIGVVSNID 312
Score = 36.3 bits (80), Expect = 0.44
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1
Query: 331 PYVRGVAMNPVEHPHGGG 384
P VRGVAMN +HPHGGG
Sbjct: 331 PTVRGVAMNKCDHPHGGG 348
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 50.0 bits (114), Expect = 3e-05
Identities = 25/78 (32%), Positives = 45/78 (57%)
Frame = +2
Query: 29 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 208
++ G MP+ +PEGT V N+E G++AR++G++A ++G + K ++L SG
Sbjct: 130 IKPGFSMPLAFIPEGTQVHNIELHPKGGGQIARSAGSYARILGQDETGKYVILQLLSGET 189
Query: 209 KVLPSSNRGMVGIVAEVD 262
+ R VG+V+ +D
Sbjct: 190 RKFLKECRATVGVVSNLD 207
Score = 38.7 bits (86), Expect = 0.083
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = +1
Query: 283 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 384
KAGR H R P VRG AMNP +HPHGGG
Sbjct: 215 KAGRNRH-----RGIRPTVRGSAMNPNDHPHGGG 243
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 48.8 bits (111), Expect = 8e-05
Identities = 25/73 (34%), Positives = 41/73 (56%)
Frame = +2
Query: 35 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 214
+G+ MP+G M GTI+ N+E G ++ RA+G A ++ P + +KLPSG K
Sbjct: 14 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTKW 72
Query: 215 LPSSNRGMVGIVA 253
+ + R +G V+
Sbjct: 73 INAKCRATIGTVS 85
Score = 40.7 bits (91), Expect = 0.020
Identities = 18/30 (60%), Positives = 21/30 (70%), Gaps = 4/30 (13%)
Frame = +1
Query: 307 YKVKRNCW----PYVRGVAMNPVEHPHGGG 384
YK ++ W P VRGVAMNP +HPHGGG
Sbjct: 95 YKAGQSRWLGIRPKVRGVAMNPCDHPHGGG 124
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/80 (28%), Positives = 48/80 (60%)
Frame = +2
Query: 14 GKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 193
G ++ ++VGN +P+ +P T + N+E G G+L R++G+ AT++ D V+L
Sbjct: 145 GPESDIKVGNALPLKNIPLQTTIHNIELVPGRGGQLCRSAGSAATLVKKADDGGYCVVRL 204
Query: 194 PSGAKKVLPSSNRGMVGIVA 253
PSG ++++ + +G+++
Sbjct: 205 PSGEQRLVLENCMATIGMLS 224
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 47.2 bits (107), Expect = 2e-04
Identities = 25/73 (34%), Positives = 40/73 (54%)
Frame = +2
Query: 35 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 214
+GN + + +P GT++ N+E G + RA+G FA +I R++LPSGA
Sbjct: 122 LGNCVQLAYIPVGTLIHNIEWNPGQGAKFVRAAGTFAQLI--QKHEATVRLRLPSGALAS 179
Query: 215 LPSSNRGMVGIVA 253
+ S R +GIV+
Sbjct: 180 INSQCRATIGIVS 192
Score = 42.3 bits (95), Expect = 0.007
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1
Query: 331 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 417
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 214 PVVRGVAMNPVDHPHGGGEGRTKGGRRSV 242
>UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein L2 - Cafeteria
roenbergensis
Length = 252
Score = 46.4 bits (105), Expect = 4e-04
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 331 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRTGR-LWR 486
P VRGVAMNP++HPHGGG + G +V + GR + R+T R LW+
Sbjct: 196 PSVRGVAMNPIDHPHGGGEGKTSGGRPSVSKW---GRLTKNVKTRKTKRALWQ 245
>UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1;
Arabidopsis thaliana|Rep: Putative uncharacterized
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 724
Score = 45.6 bits (103), Expect = 7e-04
Identities = 20/27 (74%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +1
Query: 304 KYKVKRNCWPYVRGVAM-NPVEHPHGG 381
K +KRN W VRGVAM NPVEHPHGG
Sbjct: 411 KLMIKRNMWAKVRGVAMMNPVEHPHGG 437
>UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria
gruberi|Rep: Ribosomal protein L2 - Naegleria gruberi
Length = 268
Score = 45.6 bits (103), Expect = 7e-04
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +1
Query: 331 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTS 432
P VRGVAMNPV+HPHGGG + KAS + S
Sbjct: 222 PTVRGVAMNPVDHPHGGGEGKKSKKASPTNKWAS 255
>UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L2 - Carsonella
ruddii
Length = 235
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Frame = +1
Query: 307 YKVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 402
YK +N W P VRGVAMNPV+HPHGGG + G
Sbjct: 180 YKAGQNRWKGIRPTVRGVAMNPVDHPHGGGEGKTSG 215
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Frame = +1
Query: 307 YKVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 402
YK +N W P VRGVAMNPV+HPHGGG + G
Sbjct: 180 YKAGQNRWRGIRPTVRGVAMNPVDHPHGGGEGKTSG 215
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 44.8 bits (101), Expect = 0.001
Identities = 26/68 (38%), Positives = 38/68 (55%)
Frame = +2
Query: 62 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMV 241
MP GT + N+E +G G+LARA+G A +I + K +KLPSG +++ + V
Sbjct: 3 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATV 60
Query: 242 GIVAEVDV 265
G V V V
Sbjct: 61 GQVGNVGV 68
Score = 41.5 bits (93), Expect = 0.012
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +1
Query: 325 CW----PYVRGVAMNPVEHPHGGG 384
CW P VRGV MNPV+HPHGGG
Sbjct: 80 CWLGKRPVVRGVVMNPVDHPHGGG 103
>UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3;
Phaeophyceae|Rep: Ribosomal protein L2 - Laminaria
digitata
Length = 254
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +1
Query: 331 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 417
P VRGVAMNP++HPHGGG + G S+V
Sbjct: 201 PTVRGVAMNPIDHPHGGGEGKTSGGRSSV 229
>UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L2 -
Thraustochytrium aureum
Length = 236
Score = 43.6 bits (98), Expect = 0.003
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +1
Query: 319 RNCWPYVRGVAMNPVEHPHGGG 384
RN P VRGVAMNPV+HPHGGG
Sbjct: 190 RNKRPKVRGVAMNPVDHPHGGG 211
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 43.2 bits (97), Expect = 0.004
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +2
Query: 5 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDR 112
+YCGKKATL VGNV+P+ ++PEG + +G R
Sbjct: 88 LYCGKKATLVVGNVLPLRSIPEGAXCLQRRDHVGYR 123
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 42.7 bits (96), Expect = 0.005
Identities = 27/83 (32%), Positives = 39/83 (46%)
Frame = +2
Query: 14 GKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 193
G A VGN P MP GT++ +E G G+ ARA+G A + + +R L
Sbjct: 119 GPGAPTTVGNAPPPTHMPLGTVMHGIEVAPGKGGQSARAAGAPAKPVAKEGQSATSR--L 176
Query: 194 PSGAKKVLPSSNRGMVGIVAEVD 262
P G + +P + +VG VD
Sbjct: 177 PPGEVRSIPQNRPAVVGQAGNVD 199
Score = 39.9 bits (89), Expect = 0.036
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 331 PYVRGVAMNPVEHPHGGG 384
P VRGV MNPV+HPHGGG
Sbjct: 218 PRVRGVVMNPVDHPHGGG 235
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 42.7 bits (96), Expect = 0.005
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 38 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 175
GN +P+ +P GT++ N+ + G G+L R++G +ATVI D K
Sbjct: 212 GNCLPLHMIPVGTLIFNVGLRPGKGGQLCRSAGTYATVISKGSDTK 257
Score = 36.7 bits (81), Expect = 0.33
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 322 NCWPYVRGVAMNPVEHPHGGGNHQHIG 402
N P VRG+AMN +HPHGGG + G
Sbjct: 334 NIRPTVRGLAMNAADHPHGGGRGKSKG 360
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 42.7 bits (96), Expect = 0.005
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1
Query: 331 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 417
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 199 PVVRGVAMNPVDHPHGGGQGKTSGGRPSV 227
>UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondrial;
n=2; Saccharomycetales|Rep: 60S ribosomal protein RML2,
mitochondrial - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 376
Score = 42.3 bits (95), Expect = 0.007
Identities = 20/75 (26%), Positives = 41/75 (54%)
Frame = +2
Query: 29 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 208
L+ GN +P+ +P G+I+ + R +L RA+G F ++G + + + +KL SG +
Sbjct: 220 LQRGNCLPLRMIPVGSIIHCIGLNSQRRSQLVRAAGTFGKILGKDQERQLAIIKLCSGEQ 279
Query: 209 KVLPSSNRGMVGIVA 253
+ + +G+V+
Sbjct: 280 RYISLDCHATLGVVS 294
Score = 37.5 bits (83), Expect = 0.19
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +1
Query: 283 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 384
KAGR +Y KR P VRG+AMN +HPHGGG
Sbjct: 305 KAGR--RRYLGKR---PVVRGMAMNAKDHPHGGG 333
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 42.3 bits (95), Expect = 0.007
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = +1
Query: 319 RNCWPYVRGVAMNPVEHPHGGGNHQHIG 402
R P VRGVAMNPV+HPHGGG + G
Sbjct: 220 RGVRPTVRGVAMNPVDHPHGGGEGRTSG 247
Score = 37.5 bits (83), Expect = 0.19
Identities = 20/83 (24%), Positives = 45/83 (54%)
Frame = +2
Query: 5 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 184
+ G+ A ++VGN +P+ +P GT+V +E K G + AR++G ++ + +
Sbjct: 122 IVAGEFAAIKVGNSLPLRNIPVGTVVHCVEGKPGKGAQYARSAGTSIQLVA--KEGEYAT 179
Query: 185 VKLPSGAKKVLPSSNRGMVGIVA 253
+++ SG + + + + +G V+
Sbjct: 180 LRMRSGEMRKVLADCKATIGEVS 202
>UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 148
Score = 41.5 bits (93), Expect = 0.012
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +1
Query: 325 CW----PYVRGVAMNPVEHPHGGG 384
CW P VRGV MNPV+HPHGGG
Sbjct: 84 CWLGKRPVVRGVVMNPVDHPHGGG 107
>UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3;
Dictyosteliida|Rep: Ribosomal protein L2 - Dictyostelium
citrinum
Length = 266
Score = 41.5 bits (93), Expect = 0.012
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +1
Query: 265 IDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGG 381
I+K I K+ +A K + P VRG+AMNPV+HPHGG
Sbjct: 181 IEKKIKKSKKASESRK--KGIRPIVRGLAMNPVDHPHGG 217
Score = 37.5 bits (83), Expect = 0.19
Identities = 21/82 (25%), Positives = 43/82 (52%)
Frame = +2
Query: 17 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 196
K+ L+VG + +PEG ++ N+E +L+RA+G + +I + K + VKL
Sbjct: 102 KQGILQVGYTTKIKNIPEGILINNIELMENSGSKLSRAAGTSSLII-KQYNKKYSLVKLS 160
Query: 197 SGAKKVLPSSNRGMVGIVAEVD 262
S +++ + +G V+ ++
Sbjct: 161 SKECRLISNECYATIGTVSNIE 182
>UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 321
Score = 39.9 bits (89), Expect = 0.036
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +2
Query: 38 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 214
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP +
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLPHKHEFS 217
Query: 215 LPSSNRGMVGIVAEVDVLTNLF*KLEGH 298
L + VG ++ D+ +F + H
Sbjct: 218 LHRTCMATVGRLSHADIDGKIFGSAQMH 245
>UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas
danica|Rep: Ribosomal protein L2 - Ochromonas danica
Length = 261
Score = 39.5 bits (88), Expect = 0.047
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 331 PYVRGVAMNPVEHPHGG 381
P VRGVAMNPV+HPHGG
Sbjct: 220 PIVRGVAMNPVDHPHGG 236
Score = 36.3 bits (80), Expect = 0.44
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +2
Query: 62 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMV 241
+P GTI+ N+ + + +++GNFA +I D + ++KLPSG P ++ +
Sbjct: 137 IPTGTIINNIGNINSKKSKYVKSAGNFAELI--QKDTENAKLKLPSGKIIKHPITSLATI 194
Query: 242 GIVA 253
G ++
Sbjct: 195 GSIS 198
>UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 -
Babesia bovis
Length = 242
Score = 39.5 bits (88), Expect = 0.047
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +1
Query: 307 YKVKRNCWPYVRGVAMNPVEHPHGGG 384
YK+K P VRG AMN +HPHGGG
Sbjct: 188 YKIKLGRRPKVRGTAMNACDHPHGGG 213
>UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L2 - Opitutaceae
bacterium TAV2
Length = 288
Score = 39.1 bits (87), Expect = 0.062
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +1
Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 402
G +++ + KAGR +++ KR P VRG+ MNPV+HP+GGG + G
Sbjct: 201 GEHMNRKLGKAGR--NRWLGKR---PRVRGMVMNPVDHPNGGGQGKSKG 244
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 39.1 bits (87), Expect = 0.062
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = -2
Query: 115 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINK 2
T++TH + +AHNGTL S R +I+N + L+TI++
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIANNEIGLLATIDE 44
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 39.1 bits (87), Expect = 0.062
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = -2
Query: 346 HHVHMASSYV*PCTCGMPFQLSK*VCQYVHLSNNTDHASVA*WQNLLGSRR*LYSCTLSI 167
HH+ +ASSY T L + SNNT++ SV WQN L +RR L + T +
Sbjct: 17 HHIPLASSYASSTT-----SLQDWLVDTTTASNNTNYGSVGRWQNFLDTRRQLVTGTHVL 71
Query: 166 RIVS--NHSGEVSR 131
R+ S N +V R
Sbjct: 72 RLASCQNDQSQVVR 85
>UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymus
synuroideus|Rep: Ribosomal protein L2 - Chrysodidymus
synuroideus
Length = 262
Score = 38.7 bits (86), Expect = 0.083
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1
Query: 331 PYVRGVAMNPVEHPHGG 381
P VRG+AMNPV+HPHGG
Sbjct: 220 PSVRGIAMNPVDHPHGG 236
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 38.7 bits (86), Expect = 0.083
Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +1
Query: 331 PYVRGVAMNPVEHPHGGGNHQH-IGKAS 411
P VRGVAMN +HPHGGG ++ IG++S
Sbjct: 213 PKVRGVAMNACDHPHGGGEGKNSIGRSS 240
Score = 36.7 bits (81), Expect = 0.33
Identities = 23/88 (26%), Positives = 46/88 (52%)
Frame = +2
Query: 5 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 184
+Y G+ L++GN++P+ +P G+ + N+E + S A +I K
Sbjct: 112 IYIGETIELKIGNILPIKKIPCGSWIHNIEHNPTKGAVFVKNSKISAFLI--YIGKKYVT 169
Query: 185 VKLPSGAKKVLPSSNRGMVGIVAEVDVL 268
+KLPSG ++L N+ + I+ E++++
Sbjct: 170 IKLPSGEIRLL---NKNVFCILGELNII 194
>UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8;
Aconoidasida|Rep: 50S ribosomal protein L2, putative -
Theileria annulata
Length = 334
Score = 38.7 bits (86), Expect = 0.083
Identities = 19/34 (55%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +1
Query: 292 RAYHKYKVKRNC-W-PYVRGVAMNPVEHPHGGGN 387
R K +RN W P VRG+AMN HPHGGGN
Sbjct: 250 RILKKAGTRRNMGWRPVVRGIAMNANSHPHGGGN 283
>UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 382
Score = 38.7 bits (86), Expect = 0.083
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +2
Query: 38 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 217
GN +P+ +P GT+V N+ +M R++G +AT+I + + K+ +G V+
Sbjct: 154 GNCLPMHMIPVGTVVYNVGSRMDGGAVFCRSAGTYATIISKEEETRDDGTKVMTGKHVVV 213
>UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1;
Medicago truncatula|Rep: Translation protein SH3-like -
Medicago truncatula (Barrel medic)
Length = 52
Score = 38.3 bits (85), Expect = 0.11
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +1
Query: 337 VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGL 453
VRGV MNPV+HPHGGG G+A K+ +GL
Sbjct: 11 VRGVVMNPVDHPHGGGE----GRAPIDKKKKKTLNSLGL 45
>UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_288, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 315
Score = 37.9 bits (84), Expect = 0.14
Identities = 21/80 (26%), Positives = 39/80 (48%)
Frame = -2
Query: 241 DHASVA*WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLRH 62
+H S + W NLL R L IR+V++ + ++ + TSIT+ +F + GT
Sbjct: 68 NHCSASTWNNLLSPRWELDPAGAIIRVVADDNSSLAGCPGEDTSITNVIFNVTDLGTFGS 127
Query: 61 SSNRHHISNFKSCFLSTINK 2
+ ++ + FL+ N+
Sbjct: 128 RAQGQNVIGNEGGFLTAANE 147
>UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02322 protein - Schistosoma
japonicum (Blood fluke)
Length = 393
Score = 37.9 bits (84), Expect = 0.14
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 38 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 154
G+ PVGA+P GT++ E K G R +G+ ATV+
Sbjct: 186 GDAYPVGALPVGTVISQFEIKPGQGALFCRTAGSSATVV 224
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 37.9 bits (84), Expect = 0.14
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 17 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 160
+ TL+ GNV+P+ +P G V N+ + R +L R++G F V+ H
Sbjct: 290 RTVTLKPGNVLPLYLIPPGMQVHNISLTVDGRMQLCRSAGTFGQVVSH 337
Score = 37.5 bits (83), Expect = 0.19
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Frame = +1
Query: 310 KVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIG 402
K RN W P+VRG AMN V+H HGGG + G
Sbjct: 405 KAGRNRWLGRRPHVRGAAMNSVDHAHGGGRGKSKG 439
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 37.5 bits (83), Expect = 0.19
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +1
Query: 265 IDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKAS 411
I + + K + + + K + P +RG AMN V+HPHGGG GKAS
Sbjct: 188 IRRKVNKNIKKHAGFNRKLSIRPKIRGAAMNAVDHPHGGGE----GKAS 232
Score = 36.3 bits (80), Expect = 0.44
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +2
Query: 14 GKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKL 193
G KA L++GN +P+ + G+ + N+E + +G L + + N +I D T VKL
Sbjct: 110 GFKAPLKIGNALPLYKILLGSFIYNIEIRYKGKGSLVK-NANHNAIILMIGDIYVT-VKL 167
Query: 194 PSGAKKVL 217
PSG K+L
Sbjct: 168 PSGEIKLL 175
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 37.5 bits (83), Expect = 0.19
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = +2
Query: 38 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 199
G+ P+GA+P GT + LE+ G + L A+G F T++ D + V+LPS
Sbjct: 164 GDAYPLGALPVGTRIHCLEKNPGQQCHLIHAAGTFGTILRKFDD--KVVVQLPS 215
>UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5;
Tetrahymena|Rep: Ribosomal protein L2 - Tetrahymena
thermophila
Length = 262
Score = 37.1 bits (82), Expect = 0.25
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1
Query: 337 VRGVAMNPVEHPHGG 381
VRGVAMNPV+HPHGG
Sbjct: 228 VRGVAMNPVDHPHGG 242
>UniRef50_Q5Z7Q8 Cluster: Putative uncharacterized protein
OSJNBa0021N09.38; n=2; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0021N09.38 - Oryza sativa subsp. japonica (Rice)
Length = 188
Score = 36.7 bits (81), Expect = 0.33
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 367 HPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRTGRLWRQDRYK 501
+PHGGG H + +R G + +AARR G +W R++
Sbjct: 47 NPHGGGGHAPLPPPQNPRRPNLVGAEEVAVAARRRGGMWMGSRWR 91
>UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 467
Score = 36.3 bits (80), Expect = 0.44
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1
Query: 331 PYVRGVAMNPVEHPHGGG 384
P VRGVAMN +HPHGGG
Sbjct: 400 PKVRGVAMNACDHPHGGG 417
>UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Paramecium tetraurelia|Rep: Mitochondrial 60S
ribosomal protein L2 - Paramecium tetraurelia
Length = 259
Score = 36.3 bits (80), Expect = 0.44
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1
Query: 331 PYVRGVAMNPVEHPHGG 381
P VRGVAMNPV+HP+GG
Sbjct: 229 PRVRGVAMNPVDHPNGG 245
>UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2;
n=1; Nyctotherus ovalis|Rep: Hydrogenosomal 60S
ribosomal protein L2 - Nyctotherus ovalis
Length = 290
Score = 35.9 bits (79), Expect = 0.58
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 307 YKVKRNCWPYVRGVAMNPVEHPHGG 381
Y V R P VRG+ NPV+HP+GG
Sbjct: 249 YWVNRGIKPQVRGIVKNPVDHPNGG 273
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 35.1 bits (77), Expect = 1.0
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 115 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINK 2
T +TH + +AHNGTL S R +I+N + L+ +++
Sbjct: 19 TMVTHMVLNVAHNGTLGDGSKRQNIANNEIGLLAIVDE 56
>UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE45450p
- Drosophila melanogaster (Fruit fly)
Length = 294
Score = 35.1 bits (77), Expect = 1.0
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +2
Query: 38 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 199
G+ P+GA+P GT + LE+ G L A+G F T++ ++ V+LPS
Sbjct: 161 GDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212
>UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2).; n=2;
Deuterostomia|Rep: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2). - Takifugu
rubripes
Length = 255
Score = 34.7 bits (76), Expect = 1.3
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +2
Query: 38 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 217
G+ P+GA+P GT+V NLE + G RA+G ++ V+LPS + +
Sbjct: 130 GDAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL--RKVNGTAIVQLPSKQQVQV 187
Query: 218 PSSNRGMVGIVAEVD 262
+ VG V+ VD
Sbjct: 188 LETCMVTVGRVSNVD 202
>UniRef50_Q7WEV5 Cluster: Rod shape-determining protein; n=4;
Bordetella|Rep: Rod shape-determining protein -
Bordetella bronchiseptica (Alcaligenes bronchisepticus)
Length = 187
Score = 34.7 bits (76), Expect = 1.3
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Frame = +3
Query: 198 LEPRRFCHQA--TEAWSVLLLRWTY*QTYFESWKGIPQVQGQT*LLAICTWCCHEPCR 365
+EP R A W +LL W + W G P V +L I WC HEP R
Sbjct: 20 VEPERLARPAHGVFVWGTVLLVWLLSLLPWRQWPGSPDVL----VLVIAFWCVHEPRR 73
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 34.7 bits (76), Expect = 1.3
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 2 FVYCGKKATLEVGNVMPVGAMPEG 73
FV C KKATL V NV+P+ + PEG
Sbjct: 53 FVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome
shotgun sequence; n=2; Eumetazoa|Rep: Chromosome 17
SCAF14762, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 259
Score = 34.3 bits (75), Expect = 1.8
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +2
Query: 38 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 217
G+ P+GA+P GT+V NLE + G RA+G ++ V+LPS + +
Sbjct: 164 GDAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL--RKVNGTAIVQLPSKQQVQV 221
Query: 218 PSSNRGMVGIVAEVD 262
+ VG V+ +D
Sbjct: 222 LETCMVTVGRVSNID 236
>UniRef50_Q4MYC0 Cluster: Ribosomal protein L2, putative; n=1;
Theileria parva|Rep: Ribosomal protein L2, putative -
Theileria parva
Length = 246
Score = 34.3 bits (75), Expect = 1.8
Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +1
Query: 331 PYVRGVAMNPVEHPHGGGNHQ-HIGKAS 411
P VRG AMN +HPHGGG + IG+ S
Sbjct: 196 PKVRGSAMNACDHPHGGGEGKAPIGRRS 223
>UniRef50_Q25807 Cluster: Rpl2 protein; n=2; Plasmodium|Rep: Rpl2
protein - Plasmodium falciparum
Length = 245
Score = 34.3 bits (75), Expect = 1.8
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +1
Query: 307 YKVKRNCWPYVRGVAMNPVEHPHGGG 384
Y + N P VRG A N +HPHGGG
Sbjct: 194 YNIYYNIKPKVRGKAKNVCDHPHGGG 219
>UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial
precursor; n=24; Euteleostomi|Rep: 39S ribosomal protein
L2, mitochondrial precursor - Homo sapiens (Human)
Length = 305
Score = 34.3 bits (75), Expect = 1.8
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +2
Query: 38 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 217
G+ P+GA+P GT++ N+E + G + RA+G ++ ++LPS + +
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQV 236
Query: 218 PSSNRGMVGIVAEVD 262
+ VG V+ VD
Sbjct: 237 LETCVATVGRVSNVD 251
>UniRef50_UPI00006A2927 Cluster: UPI00006A2927 related cluster; n=1;
Xenopus tropicalis|Rep: UPI00006A2927 UniRef100 entry -
Xenopus tropicalis
Length = 1275
Score = 33.9 bits (74), Expect = 2.3
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Frame = -3
Query: 477 SSGPASSNKTNFATSRCSSLDSGSLTYMLMVTTTVRMLYRVH------GNTTYIWPAVTF 316
SS P ++ T TS ++ S ++T + +TTV G+ T I P+ T
Sbjct: 135 SSEPLTTETTYALTSTATTAPSTAVTSKTLASTTVTSSTTTEIASVSIGSETTIGPSST- 193
Query: 315 DLVLVVCPSSFQNRFVNTSTSATIPTMP 232
L+ ++ PS+ + ST A+I T+P
Sbjct: 194 -LLEIILPSTINTTLITESTEASIATVP 220
>UniRef50_A6NSE2 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 348
Score = 33.1 bits (72), Expect = 4.1
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 83 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 217
C+L+E+M +RG L R+ N+ G PD R V+LP ++++
Sbjct: 297 CDLKERMAERGILLRSCANYD---GLGPDYYRAAVRLPEENERLI 338
>UniRef50_Q9Z543 Cluster: Putative DNA-binding protein; n=1;
Streptomyces coelicolor|Rep: Putative DNA-binding
protein - Streptomyces coelicolor
Length = 303
Score = 32.7 bits (71), Expect = 5.4
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 328 WPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 462
WPY+R V + E GG +G +T +R SA + VG + A
Sbjct: 9 WPYIRSVRVRVGERTRAGGEFDLMG--TTTRRNASAMKMVGALLA 51
>UniRef50_Q8HIS1 Cluster: Ribosomal protein L29; n=1; Monosiga
brevicollis|Rep: Ribosomal protein L29 - Monosiga
brevicollis
Length = 337
Score = 32.7 bits (71), Expect = 5.4
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 8/41 (19%)
Frame = +1
Query: 283 KAGRAYHKYKVKR--------NCWPYVRGVAMNPVEHPHGG 381
K HKY++K N P VRG A NPV+HP GG
Sbjct: 271 KVSNELHKYEIKGKAGTNRLLNNRPKVRGKAQNPVDHPMGG 311
>UniRef50_Q8CM44 Cluster: DNA gyrase subunit A; n=4; Leptospira|Rep:
DNA gyrase subunit A - Leptospira interrogans
Length = 834
Score = 32.3 bits (70), Expect = 7.2
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = +2
Query: 2 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKR- 178
+V C K +GN P G + + ++ R L GNF ++ G NP A R
Sbjct: 87 YVKCAKIVGEVIGNYHPHGDASVYEALVRMVQEFSLRVPLIDGQGNFGSIDGDNPAAYRY 146
Query: 179 TRVKLPSGAKKVLPSSNRGMVGIVAEVD 262
T +L A+++L + V D
Sbjct: 147 TEARLEKVAEELLRDIEKETVSFSPNYD 174
>UniRef50_Q72AL2 Cluster: Putative uncharacterized protein; n=2;
Desulfovibrio vulgaris subsp. vulgaris|Rep: Putative
uncharacterized protein - Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB8303)
Length = 130
Score = 32.3 bits (70), Expect = 7.2
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 498 VSVLPPQSSGPASSNKTNFATSRCSSLDSGSLTYM 394
VS+LPPQ P FA S ++L GS+ YM
Sbjct: 68 VSLLPPQDRTPVEERLHRFAASAANALSIGSVFYM 102
>UniRef50_A3UWP9 Cluster: Putative uncharacterized protein; n=3;
Vibrionales|Rep: Putative uncharacterized protein -
Vibrio splendidus 12B01
Length = 7629
Score = 32.3 bits (70), Expect = 7.2
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = -3
Query: 378 TVRMLYRVHGNTTYIWPAVTFDLVLVVCPSSFQNRFVNTSTSATIPTMPLLLDGRTFLAP 199
TVR + NT Y+ +FD+ LV+ P + Q FVN + T + + +D +
Sbjct: 6662 TVRSVDTDADNTEYLGTPTSFDVDLVIDPINDQPIFVNVTNIETSEDISVAIDNFSIYDV 6721
Query: 198 DGSF 187
D +F
Sbjct: 6722 DANF 6725
>UniRef50_A7PDE5 Cluster: Chromosome chr17 scaffold_12, whole genome
shotgun sequence; n=5; eudicotyledons|Rep: Chromosome
chr17 scaffold_12, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 126
Score = 32.3 bits (70), Expect = 7.2
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +1
Query: 337 VRGVAMNPVEHPHGGG 384
VRGV MNPV+HPH G
Sbjct: 70 VRGVVMNPVDHPHRSG 85
>UniRef50_Q2H7W8 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 348
Score = 32.3 bits (70), Expect = 7.2
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 150 TVAKFPEARARRPLSPIFSSRLHTMVPSGIAPTGITFPTSRVA 22
+VA PEA A P SP+FS R+ P P TFP S+++
Sbjct: 3 SVAYEPEALAFDP-SPLFSQRVQRWEPGASKPNPDTFPFSKIS 44
>UniRef50_Q0CD71 Cluster: Predicted protein; n=3;
Trichocomaceae|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 471
Score = 32.3 bits (70), Expect = 7.2
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 249 TIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPIT--VAKFPEARARRP 112
T+PT PL LDGRT +G LVR+A L +T + R RP
Sbjct: 11 TVPTSPLDLDGRTL---EGGGQLVRIAVALAALTGQAIRINHIRGNRP 55
>UniRef50_UPI0000E48847 Cluster: PREDICTED: similar to titin isoform
N2-A; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to titin isoform N2-A - Strongylocentrotus
purpuratus
Length = 10984
Score = 31.9 bits (69), Expect = 9.5
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 47 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 181
+P+ P T+ ++EK D GR +AS + + N DA+RT
Sbjct: 8790 VPISGTPTPTVAWLMDEKQVDDGRRIKASTTTYSAVLTNKDARRT 8834
>UniRef50_A4ECN1 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 577
Score = 31.9 bits (69), Expect = 9.5
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 361 VEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRTGRL 480
VE H G +H +GKA + R T G ++ L+ A + GRL
Sbjct: 463 VEVTHLGVSHLTVGKAHILARSTERGVRILLVQAIKEGRL 502
>UniRef50_A3JMF2 Cluster: Glycosyl transferase, family 2; n=1;
Rhodobacterales bacterium HTCC2150|Rep: Glycosyl
transferase, family 2 - Rhodobacterales bacterium
HTCC2150
Length = 407
Score = 31.9 bits (69), Expect = 9.5
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +2
Query: 59 AMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR 232
A+PE T +CNL E D+G +A A+G V G N + + R +L +G + LP + +
Sbjct: 88 AVPEPTWLCNLSEAFKDQG-VAAATG---FVRGRNGISFQWRGRLVNGQSQTLPITTK 141
>UniRef50_O62370 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 417
Score = 31.9 bits (69), Expect = 9.5
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 1/109 (0%)
Frame = -3
Query: 345 TTYIWPAVTFDLVLVVCPSSFQNRFVNTSTSATIPTMPLLLDGRTFLAPDGSFTLVRLAS 166
T+ +W A T L PS ++ ++T+A +PT TF AP S
Sbjct: 223 TSSVWKATTTPSDLPTKPSRTRSLTSTSTTTAKLPT----TTSTTFAAPQASTEPSEATE 278
Query: 165 GLCPITVAKFPEARARRPLSPIFSSR-LHTMVPSGIAPTGITFPTSRVA 22
L T A P + R ++ I +R L + + + T T+R+A
Sbjct: 279 ALATATPADLPTKPSGREITTITGTRKLSSTSTTKLPKTASKTSTARLA 327
>UniRef50_Q6CPX1 Cluster: Similar to sp|Q03823 Saccharomyces
cerevisiae YMR160w singleton; n=1; Kluyveromyces
lactis|Rep: Similar to sp|Q03823 Saccharomyces
cerevisiae YMR160w singleton - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 716
Score = 31.9 bits (69), Expect = 9.5
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = -3
Query: 207 LAPDGSFTLVRLASGLCPITVAKFPEARARRPLSPIFSSRLHTMVPSGIAPT 52
L DG ++ S CP+ ++K+P R+ S I +++ T++P G++PT
Sbjct: 107 LDSDGVLSVYNTGSATCPLPLSKYPLLPQRK--STIINAKNSTIIP-GVSPT 155
>UniRef50_A6REP2 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 141
Score = 31.9 bits (69), Expect = 9.5
Identities = 21/49 (42%), Positives = 24/49 (48%)
Frame = -3
Query: 330 PAVTFDLVLVVCPSSFQNRFVNTSTSATIPTMPLLLDGRTFLAPDGSFT 184
P V VLV +F T+ PT+PL L G TFL PD SFT
Sbjct: 79 PYVLLGQVLVASYEGKGVKFFITALDQQHPTLPLPL-GLTFLVPDHSFT 126
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,993,327
Number of Sequences: 1657284
Number of extensions: 12635291
Number of successful extensions: 38694
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 37203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38657
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 33739557507
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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