Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1062
         (533 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...   159   4e-41
AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    25   2.1  
DQ990877-1|ABJ90145.1|  105|Anopheles gambiae putative salivary ...    24   3.7  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   4.9  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   4.9  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    23   6.4  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score =  159 bits (387), Expect = 4e-41
 Identities = 71/75 (94%), Positives = 72/75 (96%)
 Frame = +1

Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 435
           GGRIDKPILKAGRAYHKYKVKRNCWP VRGVAMNPVEHPHGGGNHQHIGKASTVKRGT  
Sbjct: 172 GGRIDKPILKAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTPP 231

Query: 436 GRKVGLIAARRTGRL 480
           GRKVGLIAARRTGR+
Sbjct: 232 GRKVGLIAARRTGRI 246



 Score =  152 bits (368), Expect = 8e-39
 Identities = 67/84 (79%), Positives = 77/84 (91%)
 Frame = +2

Query: 2   FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 181
           FVYCG++A L++GNV+P+G MPEGTIVCNLEEK GDRG+LAR SGN+A+VI HNPD KRT
Sbjct: 87  FVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNPDTKRT 146

Query: 182 RVKLPSGAKKVLPSSNRGMVGIVA 253
           RVKLPSGAKKVLPS+NR MVGIVA
Sbjct: 147 RVKLPSGAKKVLPSANRAMVGIVA 170


>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -1

Query: 485 LHNLPVLRAAIRPTLR 438
           +HNLP LRA I+  LR
Sbjct: 371 MHNLPYLRACIKEGLR 386


>DQ990877-1|ABJ90145.1|  105|Anopheles gambiae putative salivary
           secreted peptide protein.
          Length = 105

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 504 FFVSVLPPQSSGPASSNKT 448
           FF+++L   SS PA SN+T
Sbjct: 9   FFIAMLVLVSSAPAESNQT 27


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -3

Query: 330 PAVTFDLVLVVCPSSFQNRFVNTSTSATIPTM 235
           P +     ++  P  F+N  +NT T+   P+M
Sbjct: 478 PNMAIKAAMLAYPDVFKNVLMNTLTTGQFPSM 509


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -2

Query: 358 GSWQHHVHMASSYV*PCTCGMPFQLSK*VCQY 263
           GS  H     SSYV    CG P ++    C++
Sbjct: 504 GSEGHKARDCSSYVKCAACGGPHRIGHMSCEH 535


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = +1

Query: 223 KQQRHGRYCC 252
           +QQ+HG++CC
Sbjct: 280 QQQQHGQHCC 289


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,071
Number of Sequences: 2352
Number of extensions: 13069
Number of successful extensions: 39
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)