Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1062
(533 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 149 8e-36
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 149 8e-36
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 149 8e-36
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 149 8e-36
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 149 8e-36
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 149 8e-36
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 149 8e-36
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 149 8e-36
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 149 8e-36
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 89 9e-18
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 35 0.16
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 34 0.27
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 34 0.27
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 34 0.27
BC072021-1|AAH72021.1| 227|Homo sapiens CTBP1 protein protein. 29 7.8
BC028410-1|AAH28410.1| 428|Homo sapiens FLJ13231 protein protein. 29 7.8
AK024779-1|BAB14999.1| 493|Homo sapiens protein ( Homo sapiens ... 29 7.8
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 149 bits (360), Expect = 8e-36
Identities = 66/75 (88%), Positives = 68/75 (90%)
Frame = +1
Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 435
GGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R A
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPA 231
Query: 436 GRKVGLIAARRTGRL 480
GRKVGLIAARRTGRL
Sbjct: 232 GRKVGLIAARRTGRL 246
Score = 144 bits (348), Expect = 2e-34
Identities = 64/84 (76%), Positives = 75/84 (89%)
Frame = +2
Query: 2 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 181
FVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+T
Sbjct: 87 FVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKT 146
Query: 182 RVKLPSGAKKVLPSSNRGMVGIVA 253
RVKLPSG+KKV+ S+NR +VG+VA
Sbjct: 147 RVKLPSGSKKVISSANRAVVGVVA 170
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 149 bits (360), Expect = 8e-36
Identities = 66/75 (88%), Positives = 68/75 (90%)
Frame = +1
Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 435
GGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R A
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPA 231
Query: 436 GRKVGLIAARRTGRL 480
GRKVGLIAARRTGRL
Sbjct: 232 GRKVGLIAARRTGRL 246
Score = 144 bits (348), Expect = 2e-34
Identities = 64/84 (76%), Positives = 75/84 (89%)
Frame = +2
Query: 2 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 181
FVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+T
Sbjct: 87 FVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKT 146
Query: 182 RVKLPSGAKKVLPSSNRGMVGIVA 253
RVKLPSG+KKV+ S+NR +VG+VA
Sbjct: 147 RVKLPSGSKKVISSANRAVVGVVA 170
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 149 bits (360), Expect = 8e-36
Identities = 66/75 (88%), Positives = 68/75 (90%)
Frame = +1
Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 435
GGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R A
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPA 231
Query: 436 GRKVGLIAARRTGRL 480
GRKVGLIAARRTGRL
Sbjct: 232 GRKVGLIAARRTGRL 246
Score = 144 bits (349), Expect = 2e-34
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +2
Query: 2 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 181
FVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+T
Sbjct: 87 FVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKT 146
Query: 182 RVKLPSGAKKVLPSSNRGMVGIVA 253
RVKLPSG+KKV+ S+NR +VG+VA
Sbjct: 147 RVKLPSGSKKVISSANRAVVGVVA 170
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 149 bits (360), Expect = 8e-36
Identities = 66/75 (88%), Positives = 68/75 (90%)
Frame = +1
Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 435
GGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R A
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPA 231
Query: 436 GRKVGLIAARRTGRL 480
GRKVGLIAARRTGRL
Sbjct: 232 GRKVGLIAARRTGRL 246
Score = 144 bits (348), Expect = 2e-34
Identities = 64/84 (76%), Positives = 75/84 (89%)
Frame = +2
Query: 2 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 181
FVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+T
Sbjct: 87 FVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKT 146
Query: 182 RVKLPSGAKKVLPSSNRGMVGIVA 253
RVKLPSG+KKV+ S+NR +VG+VA
Sbjct: 147 RVKLPSGSKKVISSANRAVVGVVA 170
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 149 bits (360), Expect = 8e-36
Identities = 66/75 (88%), Positives = 68/75 (90%)
Frame = +1
Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 435
GGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R A
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPA 231
Query: 436 GRKVGLIAARRTGRL 480
GRKVGLIAARRTGRL
Sbjct: 232 GRKVGLIAARRTGRL 246
Score = 144 bits (349), Expect = 2e-34
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +2
Query: 2 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 181
FVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+T
Sbjct: 87 FVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKT 146
Query: 182 RVKLPSGAKKVLPSSNRGMVGIVA 253
RVKLPSG+KKV+ S+NR +VG+VA
Sbjct: 147 RVKLPSGSKKVISSANRAVVGVVA 170
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 149 bits (360), Expect = 8e-36
Identities = 66/75 (88%), Positives = 68/75 (90%)
Frame = +1
Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 435
GGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R A
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPA 231
Query: 436 GRKVGLIAARRTGRL 480
GRKVGLIAARRTGRL
Sbjct: 232 GRKVGLIAARRTGRL 246
Score = 144 bits (349), Expect = 2e-34
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +2
Query: 2 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 181
FVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+T
Sbjct: 87 FVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKT 146
Query: 182 RVKLPSGAKKVLPSSNRGMVGIVA 253
RVKLPSG+KKV+ S+NR +VG+VA
Sbjct: 147 RVKLPSGSKKVISSANRAVVGVVA 170
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 149 bits (360), Expect = 8e-36
Identities = 66/75 (88%), Positives = 68/75 (90%)
Frame = +1
Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 435
GGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R A
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPA 231
Query: 436 GRKVGLIAARRTGRL 480
GRKVGLIAARRTGRL
Sbjct: 232 GRKVGLIAARRTGRL 246
Score = 144 bits (348), Expect = 2e-34
Identities = 64/84 (76%), Positives = 75/84 (89%)
Frame = +2
Query: 2 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 181
FVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+T
Sbjct: 87 FVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKT 146
Query: 182 RVKLPSGAKKVLPSSNRGMVGIVA 253
RVKLPSG+KKV+ S+NR +VG+VA
Sbjct: 147 RVKLPSGSKKVISSANRAVVGVVA 170
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 149 bits (360), Expect = 8e-36
Identities = 66/75 (88%), Positives = 68/75 (90%)
Frame = +1
Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 435
GGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R A
Sbjct: 126 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPA 185
Query: 436 GRKVGLIAARRTGRL 480
GRKVGLIAARRTGRL
Sbjct: 186 GRKVGLIAARRTGRL 200
Score = 144 bits (348), Expect = 2e-34
Identities = 64/84 (76%), Positives = 75/84 (89%)
Frame = +2
Query: 2 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 181
FVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+T
Sbjct: 41 FVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKT 100
Query: 182 RVKLPSGAKKVLPSSNRGMVGIVA 253
RVKLPSG+KKV+ S+NR +VG+VA
Sbjct: 101 RVKLPSGSKKVISSANRAVVGVVA 124
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 149 bits (360), Expect = 8e-36
Identities = 66/75 (88%), Positives = 68/75 (90%)
Frame = +1
Query: 256 GGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSA 435
GGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R A
Sbjct: 172 GGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPA 231
Query: 436 GRKVGLIAARRTGRL 480
GRKVGLIAARRTGRL
Sbjct: 232 GRKVGLIAARRTGRL 246
Score = 144 bits (348), Expect = 2e-34
Identities = 64/84 (76%), Positives = 75/84 (89%)
Frame = +2
Query: 2 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 181
FVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+T
Sbjct: 87 FVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKT 146
Query: 182 RVKLPSGAKKVLPSSNRGMVGIVA 253
RVKLPSG+KKV+ S+NR +VG+VA
Sbjct: 147 RVKLPSGSKKVISSANRAVVGVVA 170
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 89.0 bits (211), Expect = 9e-18
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +2
Query: 2 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFA 145
FVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+A
Sbjct: 83 FVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 35.1 bits (77), Expect = 0.16
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = +2
Query: 38 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 217
G+ P+GA+P GT++ N+E + G + RA+G ++ + ++LPS + +
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGHSIIQLPSKRQMQV 236
Query: 218 PSSNRGMVGIVAEVD 262
+ VG V+ VD
Sbjct: 237 LETCVATVGRVSNVD 251
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 34.3 bits (75), Expect = 0.27
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +2
Query: 38 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 217
G+ P+GA+P GT++ N+E + G + RA+G ++ ++LPS + +
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQV 236
Query: 218 PSSNRGMVGIVAEVD 262
+ VG V+ VD
Sbjct: 237 LETCVATVGRVSNVD 251
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 34.3 bits (75), Expect = 0.27
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +2
Query: 38 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 217
G+ P+GA+P GT++ N+E + G + RA+G ++ ++LPS + +
Sbjct: 179 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQV 236
Query: 218 PSSNRGMVGIVAEVD 262
+ VG V+ VD
Sbjct: 237 LETCVATVGRVSNVD 251
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 34.3 bits (75), Expect = 0.27
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +2
Query: 38 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 217
G+ P+GA+P GT++ N+E + G + RA+G ++ ++LPS + +
Sbjct: 176 GDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQV 233
Query: 218 PSSNRGMVGIVAEVD 262
+ VG V+ VD
Sbjct: 234 LETCVATVGRVSNVD 248
>BC072021-1|AAH72021.1| 227|Homo sapiens CTBP1 protein protein.
Length = 227
Score = 29.5 bits (63), Expect = 7.8
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +1
Query: 364 EHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAARRTGR 477
E HGGG Q G++S +RG R G AARR+GR
Sbjct: 5 ETRHGGGQAQAGGRSSGRRRGRPTRRARG-GAARRSGR 41
>BC028410-1|AAH28410.1| 428|Homo sapiens FLJ13231 protein protein.
Length = 428
Score = 29.5 bits (63), Expect = 7.8
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = -3
Query: 483 PQSSGPASSNKTNFATSRCSSLDSGSLTYMLMVTTTVRMLYRVHGNTTYIWPAVTFDLVL 304
P+ GP S++ +TS + + Y+L + V+ R+ + P F L+
Sbjct: 203 PRKKGPIPSSQNLPSTSFYPAPAGNTHLYLLSTPSVVQKAPRLIPHAKTFSPGDGFPLLQ 262
Query: 303 VVCPSSFQNRFVNTSTSATIPTMPL 229
FQ F++T + +P PL
Sbjct: 263 FKSKQEFQPLFLHTGSIPQVPFRPL 287
>AK024779-1|BAB14999.1| 493|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21126 fis, clone CAS06183. ).
Length = 493
Score = 29.5 bits (63), Expect = 7.8
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = -3
Query: 483 PQSSGPASSNKTNFATSRCSSLDSGSLTYMLMVTTTVRMLYRVHGNTTYIWPAVTFDLVL 304
P+ GP S++ +TS + + Y+L + V+ R+ + P F L+
Sbjct: 267 PRKKGPIPSSQNLPSTSFYPAPAGNTHLYLLSTPSVVQKAPRLIPHAKTFSPGDGFPLLQ 326
Query: 303 VVCPSSFQNRFVNTSTSATIPTMPL 229
FQ F++T + +P PL
Sbjct: 327 FKSKQEFQPLFLHTGSIPQVPFRPL 351
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,573,178
Number of Sequences: 237096
Number of extensions: 2076143
Number of successful extensions: 4670
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4669
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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