BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1061 (429 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|... 36 0.27 UniRef50_Q4D940 Cluster: Signal recognition particle protein, pu... 35 0.82 UniRef50_A6TUK0 Cluster: Electron transfer flavoprotein, alpha/b... 33 3.3 UniRef50_A0GZ80 Cluster: Putative uncharacterized protein; n=2; ... 32 4.4 UniRef50_Q44R29 Cluster: Electron transfer flavoprotein beta-sub... 31 7.7 UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb... 31 7.7 >UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth) Length = 191 Score = 36.3 bits (80), Expect = 0.27 Identities = 15/18 (83%), Positives = 16/18 (88%) Frame = -3 Query: 403 R*VDELSVHLVLSGYWSP 350 R VDEL+ HLVLSGYWSP Sbjct: 158 RWVDELTAHLVLSGYWSP 175 >UniRef50_Q4D940 Cluster: Signal recognition particle protein, putative; n=2; Trypanosoma|Rep: Signal recognition particle protein, putative - Trypanosoma cruzi Length = 763 Score = 34.7 bits (76), Expect = 0.82 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = -1 Query: 429 FFFFFFYCLDEWTS-SQSTWC*VVTGAHRHLQRKCATHL 316 FFFFFF C+ + S S W V + RHL+R+ T + Sbjct: 9 FFFFFFLCVCDCVPLSDSLWLAVCSNVVRHLERRVCTRM 47 >UniRef50_A6TUK0 Cluster: Electron transfer flavoprotein, alpha/beta-subunit-like protein; n=2; Clostridiales|Rep: Electron transfer flavoprotein, alpha/beta-subunit-like protein - Alkaliphilus metalliredigens QYMF Length = 265 Score = 32.7 bits (71), Expect = 3.3 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = -2 Query: 374 GVKWLLEPIDIYNVNAPPTLRYKFQGLSIVTTAAPPFKPKAL 249 GV+ ++ P+D+Y + + L+ K+ G V T PP KAL Sbjct: 29 GVESVINPLDLYAIESGIQLKEKYGGKVTVFTMGPPSATKAL 70 >UniRef50_A0GZ80 Cluster: Putative uncharacterized protein; n=2; Chloroflexus|Rep: Putative uncharacterized protein - Chloroflexus aggregans DSM 9485 Length = 201 Score = 32.3 bits (70), Expect = 4.4 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = -2 Query: 395 GRALSPPGVKWLLEPIDIYNVNAPPTLRYKFQGLSIVTTAAPPFK-PKALLLHGRNRQGG 219 GRA+ PP + P++ YN N+P + + G + P K ALL HG++R Sbjct: 50 GRAMQPPPANTV--PLNSYNPNSP-LMTGRIDG-QLADQLPPELKLDAALLAHGQSRYNA 105 Query: 218 VTYPC 204 PC Sbjct: 106 FCAPC 110 >UniRef50_Q44R29 Cluster: Electron transfer flavoprotein beta-subunit; n=1; Chlorobium limicola DSM 245|Rep: Electron transfer flavoprotein beta-subunit - Chlorobium limicola DSM 245 Length = 254 Score = 31.5 bits (68), Expect = 7.7 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -2 Query: 371 VKWLLEPIDIYNVNAPPTLRYKFQGLSIVTTAAPPFKPKALL 246 V W++ P D Y + L+ +F G ++V AA P K LL Sbjct: 31 VAWVMNPYDEYALEEALRLKERFPGSAVVALAAAPEAGKELL 72 >UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx mori (Silk moth) Length = 782 Score = 31.5 bits (68), Expect = 7.7 Identities = 12/16 (75%), Positives = 12/16 (75%) Frame = -1 Query: 228 AGWCYLSVRTHKRSYH 181 A W YL RTHKRSYH Sbjct: 569 AEWWYLPARTHKRSYH 584 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 452,787,099 Number of Sequences: 1657284 Number of extensions: 8919754 Number of successful extensions: 19026 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 18619 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 19018 length of database: 575,637,011 effective HSP length: 93 effective length of database: 421,509,599 effective search space used: 20653970351 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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