Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1061
         (429 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    26   0.17 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.2  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   3.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   3.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   3.8  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   5.0  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 25.8 bits (54), Expect = 0.17
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 258 RFEGWSSRCNYTETLELISQGGWRI 332
           ++ G +    Y E +EL  +GGW++
Sbjct: 289 KYTGEAGMLGYNEIVELQKEGGWKV 313


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = +1

Query: 46  FESQAGTNFSMKYVLNK 96
           +E Q G NF+M+Y++++
Sbjct: 840 WERQTGHNFTMEYLVSR 856


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +3

Query: 258 RFEGWSSRCNYTETLELISQGGW 326
           R+ G      Y E +E  + GGW
Sbjct: 293 RYTGERGMMGYNEIVEAQNAGGW 315


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 114 GSQY*TFVEYVFHRKIRTCLRFEHRWIA 31
           GSQY   V +V    I+    F ++WIA
Sbjct: 208 GSQYYDGVPFVTQCPIQQGNTFRYQWIA 235


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 114 GSQY*TFVEYVFHRKIRTCLRFEHRWIA 31
           GSQY   V +V    I+    F ++WIA
Sbjct: 208 GSQYYDGVPFVTQCPIQQGNTFRYQWIA 235


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 365 WLLEPIDIYNVNAPPTLRYK 306
           WL  P  + N   P +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,043
Number of Sequences: 336
Number of extensions: 2280
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9460170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)