Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1061
         (429 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative dodecenoy...    28   0.16 
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    22   8.0  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    22   8.0  

>CR954257-1|CAJ14152.1|  324|Anopheles gambiae putative
           dodecenoylCoA deltaisomerase protein.
          Length = 324

 Score = 27.9 bits (59), Expect = 0.16
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 90  QQTFNIDFHSEGITSCNKNQTRKIIICVIT 179
           QQ  +I  H EG+    +   RK ++C IT
Sbjct: 118 QQALSIVHHPEGVMGPTRRMIRKPLVCAIT 147


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 209 PCELTRGPTTSNYA 168
           P +LT  PTTSN A
Sbjct: 179 PTDLTDAPTTSNMA 192


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 209 PCELTRGPTTSNYA 168
           P +LT  PTTSN A
Sbjct: 180 PTDLTDAPTTSNMA 193


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,054
Number of Sequences: 2352
Number of extensions: 9012
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35292513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)