Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1060
(642 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0181 + 1341829-1343022 34 0.083
11_01_0181 + 1435031-1436224 34 0.083
05_01_0514 - 4270936-4272084 34 0.083
01_06_0138 + 26865895-26865953,26866628-26867870 33 0.19
11_01_0622 + 4996584-4996800,4996975-4997060,4997112-4997492,499... 32 0.45
10_01_0147 - 1722947-1723168,1723268-1723464,1723654-1723690,172... 32 0.45
08_02_1104 + 24339463-24340314,24340472-24340786 32 0.45
04_03_0704 + 18872899-18874191 32 0.45
11_01_0524 - 4115125-4115491,4116096-4116180,4116796-4116938,411... 31 0.78
02_01_0253 + 1664217-1664378,1664739-1664999,1665116-1665622,166... 31 0.78
09_04_0747 + 19892090-19893304,19893471-19893602,19894168-198942... 31 1.0
09_03_0103 - 12383585-12384700 31 1.0
10_07_0062 - 12499872-12501350 30 1.8
10_01_0129 + 1535823-1537196 30 1.8
04_01_0484 - 6352556-6352881,6352927-6353692 30 1.8
03_03_0067 + 14230211-14231506 30 1.8
02_01_0243 - 1601977-1602834,1602857-1603063 30 1.8
01_06_0970 - 33478044-33478399,33478593-33478692,33479181-33480047 29 2.4
01_01_0711 + 5506632-5507328,5507410-5507485,5507544-5508234 29 2.4
03_03_0070 - 14256143-14257492 29 3.1
11_05_0089 + 18975637-18977439 29 4.1
11_05_0086 + 18964493-18965737,18965896-18966360 29 4.1
10_01_0141 - 1686827-1687063,1687160-1687315,1688046-1688974,168... 29 4.1
03_06_0284 + 32836171-32836377,32836466-32836568,32836681-328367... 29 4.1
03_05_0588 + 25883705-25883856,25884201-25884422,25885660-258857... 29 4.1
12_02_1043 - 25646075-25646437,25646655-25647959,25648394-25648648 28 5.5
08_02_0514 + 18021365-18022527,18023489-18023660 28 5.5
08_02_0388 + 16603720-16603987,16604022-16604420,16604569-16604582 28 5.5
07_01_0946 + 7975519-7976550,7977092-7977141,7977342-7977462 28 5.5
05_01_0520 - 4492182-4492780,4496886-4497951 28 5.5
03_05_0525 + 25200207-25200580,25201061-25201751 28 5.5
03_05_0522 - 25161595-25162285,25162394-25163139 28 5.5
02_01_0261 + 1731654-1732793 28 5.5
02_01_0190 + 1276808-1278214,1278450-1278743,1278815-1279087,127... 28 5.5
11_01_0650 - 5265106-5265305,5265972-5266049,5266391-5266544,526... 28 7.2
07_03_0105 + 13455906-13457198 28 7.2
04_04_0680 - 27217563-27220088 28 7.2
04_01_0488 - 6419731-6420843 28 7.2
04_01_0477 - 6221990-6223224,6227722-6228817 28 7.2
03_04_0118 + 17418558-17419310 28 7.2
02_01_0259 - 1719673-1720857 28 7.2
05_07_0304 + 29096274-29096762 27 9.6
04_03_0708 + 18888085-18889337,18889583-18889661,18890458-18890781 27 9.6
03_05_0612 + 26117306-26118045,26118151-26118680,26119247-261192... 27 9.6
01_03_0107 - 12613491-12613538,12613906-12614139,12614682-126147... 27 9.6
>12_01_0181 + 1341829-1343022
Length = 397
Score = 34.3 bits (75), Expect = 0.083
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNV 88
EI+S I LP K + +CR VC W++V
Sbjct: 24 EIMSEILLLLPPKSILQCRAVCKAWRDV 51
>11_01_0181 + 1435031-1436224
Length = 397
Score = 34.3 bits (75), Expect = 0.083
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNV 88
EILS I LP K + +CR VC W++V
Sbjct: 24 EILSEILLLLPPKSILQCRAVCKVWRDV 51
>05_01_0514 - 4270936-4272084
Length = 382
Score = 34.3 bits (75), Expect = 0.083
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNVI 91
+++ I + LPAK + +CR VC RW+ +I
Sbjct: 24 DLIVEILSRLPAKSVRRCRRVCRRWRRLI 52
>01_06_0138 + 26865895-26865953,26866628-26867870
Length = 433
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNVI 91
+IL IFTFLP + + VC RW ++I
Sbjct: 77 DILERIFTFLPIVSMIRSTAVCKRWHDII 105
>11_01_0622 +
4996584-4996800,4996975-4997060,4997112-4997492,
4997585-4997605
Length = 234
Score = 31.9 bits (69), Expect = 0.45
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNVIDTLNKYHSL 118
E+L H+ +FLPAKQ + + RW+++ ++ S+
Sbjct: 34 EVLQHVMSFLPAKQAVRTCVLARRWRHLWKSMPALRSI 71
>10_01_0147 -
1722947-1723168,1723268-1723464,1723654-1723690,
1724688-1725584
Length = 450
Score = 31.9 bits (69), Expect = 0.45
Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 9/144 (6%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNVIDTL-------NKYHSLWYKFCGKDFKNVYKF 163
E+L HI +FL A+Q + + RW+N+ T+ +++ ++Y+ +D+ +V F
Sbjct: 24 EVLHHIMSFLDARQAVRTCVLSRRWRNLWRTVPCINADFDEFDLVFYQGDDEDYDDVLAF 83
Query: 164 AHRLSRPQITWHELYRSLTLWRQLHLARQHSTNSRQQP-RWPAKSRASDIYETERPASTL 340
++R T W + + +TNS + W + + ++ A L
Sbjct: 84 KRFVNRLLELRDPTAMIDTFWLRYTTRPEGNTNSNEDAYGWIS-------HALQKQARVL 136
Query: 341 K-PAWCIMIWTRYSEQTRSYLRRL 409
+ +C + +S T YLRR+
Sbjct: 137 EVVVFCCLFELDHSVFTSCYLRRI 160
>08_02_1104 + 24339463-24340314,24340472-24340786
Length = 388
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 2 TEILSHIFTFLPAKQLTKCREVCIRWKNVID 94
T++L I + LP CR VC RW++ ID
Sbjct: 19 TDVLVDILSQLPTSSRRLCRLVCRRWRDTID 49
>04_03_0704 + 18872899-18874191
Length = 430
Score = 31.9 bits (69), Expect = 0.45
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 8 ILSHIFTFLPAKQLTKCREVCIRWKNVID 94
++S I LP K LT+C+ VC W+ ++
Sbjct: 36 LVSEILARLPVKTLTRCKSVCRSWRAALE 64
>11_01_0524 -
4115125-4115491,4116096-4116180,4116796-4116938,
4117449-4117654,4118650-4118748,4118958-4118993,
4119222-4119276,4119505-4119690,4120572-4120759
Length = 454
Score = 31.1 bits (67), Expect = 0.78
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 47 LTKCREVCIRWKNVIDTLNKYHSLWYK 127
L +C VC W VIDT + L+YK
Sbjct: 53 LARCSTVCNSWNRVIDTAHLMRDLYYK 79
>02_01_0253 +
1664217-1664378,1664739-1664999,1665116-1665622,
1665746-1665802
Length = 328
Score = 31.1 bits (67), Expect = 0.78
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNV 88
++++ I LPAK + +CR VC W+ +
Sbjct: 74 DVVAEILLRLPAKSVLRCRAVCRSWRRI 101
>09_04_0747 +
19892090-19893304,19893471-19893602,19894168-19894215,
19894697-19894766,19894936-19894963,19896021-19896519
Length = 663
Score = 30.7 bits (66), Expect = 1.0
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNVI 91
+++ +F LP K L C VC +W+++I
Sbjct: 24 DLIEQVFLSLPVKTLLNCIGVCKQWRSII 52
>09_03_0103 - 12383585-12384700
Length = 371
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 2 TEILSHIFTFLPAKQLTKCREVCIRW 79
+++L+ +F LPA+ L CR VC W
Sbjct: 19 SDVLTEVFHRLPARTLASCRLVCKSW 44
>10_07_0062 - 12499872-12501350
Length = 492
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 8 ILSHIFTFLPAKQLTKCREVCIRWKNV 88
+L I LPA+ + +CR VC W+ +
Sbjct: 150 VLCEILVRLPARSVLRCRAVCTAWRRL 176
>10_01_0129 + 1535823-1537196
Length = 457
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNVIDT 97
EI I LPA + CR VC W+++ T
Sbjct: 102 EIQEEILLRLPANSVLHCRAVCRSWRHIAST 132
>04_01_0484 - 6352556-6352881,6352927-6353692
Length = 363
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 8 ILSHIFTFLPAKQLTKCREVCIRWKNVIDT 97
++ I LP K L +CR+VC W+ + T
Sbjct: 21 VVWEILVRLPPKPLLRCRQVCRAWRRLTST 50
>03_03_0067 + 14230211-14231506
Length = 431
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKN 85
++L I LPA+ + +CR VC W++
Sbjct: 10 DLLDEILLRLPARSILRCRAVCKAWRS 36
>02_01_0243 - 1601977-1602834,1602857-1603063
Length = 354
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNVIDT 97
++ + I LPAK + +CR VC W+ + T
Sbjct: 4 DVGAEILLRLPAKAVLRCRAVCRSWRRITTT 34
>01_06_0970 - 33478044-33478399,33478593-33478692,33479181-33480047
Length = 440
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNVIDTLNKYHSLWYKFCGKDFKN--VYKFA 166
E+L HI +F + + + R + RW VI+ L ++ L Y +DFK+ V KFA
Sbjct: 14 EVLQHILSFSRIRAIVRMRRLSRRWMRVIECL-QFICLDY----RDFKHWKVEKFA 64
>01_01_0711 + 5506632-5507328,5507410-5507485,5507544-5508234
Length = 487
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 254 STNSRQQPRWPAKSRASDIYETERPASTLKPAWCI 358
ST ++Q PRWP+ S A+ A+ L+ W +
Sbjct: 33 STPTKQSPRWPSPSAAASSVLPSGAAALLESRWAL 67
>03_03_0070 - 14256143-14257492
Length = 449
Score = 29.1 bits (62), Expect = 3.1
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKN 85
++L I +PA+ + +CR VC W++
Sbjct: 26 DLLDEILLRMPARSILRCRAVCKAWRS 52
>11_05_0089 + 18975637-18977439
Length = 600
Score = 28.7 bits (61), Expect = 4.1
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +2
Query: 8 ILSHIFTFLPAKQLTKCREVCIRWKN 85
++ HI +FLPAK+ + + RW++
Sbjct: 27 VIGHILSFLPAKEAARAAVLSSRWRH 52
>11_05_0086 + 18964493-18965737,18965896-18966360
Length = 569
Score = 28.7 bits (61), Expect = 4.1
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +2
Query: 8 ILSHIFTFLPAKQLTKCREVCIRWKN 85
++ HI +FLPAK+ + + RW++
Sbjct: 26 VIGHILSFLPAKEAARAAVLSSRWRH 51
>10_01_0141 -
1686827-1687063,1687160-1687315,1688046-1688974,
1689595-1689640,1689914-1689932,1690751-1690962,
1691063-1691218,1692240-1693184,1693448-1693597
Length = 949
Score = 28.7 bits (61), Expect = 4.1
Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 1/136 (0%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNVIDTLNKYHSLWYKFCGKDF-KNVYKFAHRLSR 181
EIL I +FL A+Q + + RW+N+ T+ ++ +F F ++ +F ++R
Sbjct: 557 EILHRIMSFLNARQAVQTCVLSRRWRNLWRTVPCINADCKEFDFFGFRRSEVEFKRFVNR 616
Query: 182 PQITWHELYRSLTLWRQLHLARQHSTNSRQQPRWPAKSRASDIYETERPASTLKPAWCIM 361
+ W + H +T+S RW + + E + + P C +
Sbjct: 617 LLELRDPIAMMDAFWFRYHKLDTDTTSSADTNRWISHALQKQARVLE---AVMYP--CHL 671
Query: 362 IWTRYSEQTRSYLRRL 409
+ +S T YLRR+
Sbjct: 672 LDLDHSSFTSRYLRRI 687
>03_06_0284 +
32836171-32836377,32836466-32836568,32836681-32836757,
32836846-32837037,32837144-32837263,32837350-32837412,
32837537-32837671,32837827-32837991,32838104-32838181,
32840303-32840389,32840548-32840619,32840925-32840951,
32842292-32842390,32843143-32843213,32843710-32843838,
32843936-32844012,32844186-32844226,32844319-32844393,
32844525-32844673,32844766-32844870,32844948-32845023,
32845465-32845541,32845761-32846529
Length = 997
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -3
Query: 277 WLLTRIRRVLSSEVQLPPQSQRPVELVPSDLRTGEPVS-EFVNVFKVLSAKLIP 119
WL R + +S V+ P P VP DLR P EF N++ ++ + P
Sbjct: 9 WLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGIIHP 62
>03_05_0588 +
25883705-25883856,25884201-25884422,25885660-25885759,
25885897-25886148
Length = 241
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNVID 94
++L++I LP + L R VC W+ VID
Sbjct: 9 DVLANILGRLPPRSLAAARCVCADWRAVID 38
>12_02_1043 - 25646075-25646437,25646655-25647959,25648394-25648648
Length = 640
Score = 28.3 bits (60), Expect = 5.5
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNV 88
+++ I +FLPA+Q + ++ RW+ V
Sbjct: 130 DVIGRILSFLPARQAARTTQLSRRWRRV 157
>08_02_0514 + 18021365-18022527,18023489-18023660
Length = 444
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNVI 91
EI+ + +LP K L + + VC W ++I
Sbjct: 44 EIVREVLIWLPVKSLARFKSVCKAWLSII 72
>08_02_0388 + 16603720-16603987,16604022-16604420,16604569-16604582
Length = 226
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNVIDT 97
++L+ I LP + L R VC W++ ID+
Sbjct: 24 DVLAEILRRLPPRSLAASRCVCTDWRSAIDS 54
>07_01_0946 + 7975519-7976550,7977092-7977141,7977342-7977462
Length = 400
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNV 88
E+L + LPAK+L + R VC W+++
Sbjct: 28 EVLFDVLVRLPAKELCRLRIVCRPWRSL 55
>05_01_0520 - 4492182-4492780,4496886-4497951
Length = 554
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNVI 91
++L + + +P K L + + VC RW+ VI
Sbjct: 21 DLLVEVLSRVPYKSLCRSKRVCRRWRRVI 49
Score = 28.3 bits (60), Expect = 5.5
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 551 NVVYYVSLNESIYAVYLSDKNKSHFLV 631
N+++ VSLN+ I+ Y D + H+++
Sbjct: 330 NIIFLVSLNDGIFISYEMDSREVHYIL 356
>03_05_0525 + 25200207-25200580,25201061-25201751
Length = 354
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNVIDT 97
++L+ I LP + L R VC W++ ID+
Sbjct: 21 DVLAEILRRLPPRSLAALRCVCTDWRSTIDS 51
>03_05_0522 - 25161595-25162285,25162394-25163139
Length = 478
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNVIDT 97
++L+ I LP + L R VC W++ ID+
Sbjct: 21 DVLAEILRRLPPRSLAALRCVCTDWRSTIDS 51
>02_01_0261 + 1731654-1732793
Length = 379
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNVIDTLNKYHSL 118
+++S I LPAK + + R VC W+ + ++ L
Sbjct: 4 DVVSEILLRLPAKAVLRSRAVCRTWRRITTAYSRRRPL 41
>02_01_0190 + 1276808-1278214,1278450-1278743,1278815-1279087,
1279204-1279336,1279425-1279551,1279788-1280284,
1280578-1280642,1280722-1280823,1281020-1281162,
1281761-1281816,1282214-1282869,1282975-1283165,
1283280-1283574,1283738-1283778,1284082-1284104,
1284173-1284369,1284472-1284581,1285309-1285639,
1285968-1286060,1286095-1286166,1286626-1286886
Length = 1788
Score = 28.3 bits (60), Expect = 5.5
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +2
Query: 287 AKSRASDIYETERPASTLKPAWCIMIWTRYSEQTRSYLRRLQPLCRNRRHSTPDE*QSTF 466
+K+ ++D+Y++ + +S P C ++W T + L L+ + R D ST
Sbjct: 1057 SKTSSTDVYKSFKSSSEKCPNICYLLWM----DTEAALEVLKCAFAHERFEPRDNPSSTP 1112
Query: 467 VHNKKTNT*PQAHSSISHDNCKLFYVIDNVVYYVSL-NESIYAVYL 601
+ S +N L V+D +V V L NE+I+++ +
Sbjct: 1113 DARVSEDGDNINIGSPDSENIMLQNVVDTIVDIVGLENEAIHSIVI 1158
>11_01_0650 -
5265106-5265305,5265972-5266049,5266391-5266544,
5266635-5266701,5266723-5266796,5266910-5267794
Length = 485
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNV 88
E+L H+ +FLPA++ + + RW+++
Sbjct: 25 EVLHHVLSFLPAQEAVRTCLLARRWRHL 52
>07_03_0105 + 13455906-13457198
Length = 430
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNVIDTL 100
+++S + P K CR VC W++ + +L
Sbjct: 17 DLVSRVADCCPVKDYASCRAVCRAWRSALPSL 48
>04_04_0680 - 27217563-27220088
Length = 841
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +1
Query: 220 SVEATAPR*TALDEFASATTVASEIQGFRYLRNGTAG 330
SVE PR D + + VA+E GF LRNG G
Sbjct: 96 SVEEGGPRVAGDDGGSGKSGVAAEGSGFEGLRNGRGG 132
>04_01_0488 - 6419731-6420843
Length = 370
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 8 ILSHIFTFLPAKQLTKCREVCIRWKNVIDT 97
++ I LP K L +CR VC W+ + T
Sbjct: 19 VVWEILVRLPPKPLLRCRLVCRAWRRLTST 48
>04_01_0477 - 6221990-6223224,6227722-6228817
Length = 776
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 8 ILSHIFTFLPAKQLTKCREVCIRWKNVIDT 97
++ I LP K L +CR VC W+ + T
Sbjct: 23 VVWEILVRLPPKPLLRCRLVCRAWRRLTST 52
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 20 IFTFLPAKQLTKCREVCIRWKNVIDT 97
I LP K L +CR VC W+ + T
Sbjct: 418 ILVRLPPKPLLRCRLVCRAWRRLTST 443
>03_04_0118 + 17418558-17419310
Length = 250
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNVIDTLNKYHSLWYKFCGKDFKNVYK 160
E+L +F L + L C VC +W+ + K W C + + ++ K
Sbjct: 8 EVLKAVFPLLDGQDLVFCMLVCRQWREIA----KDDYFWKCICARKWPSICK 55
>02_01_0259 - 1719673-1720857
Length = 394
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNV 88
+++S I LPAK + + R VC W+ +
Sbjct: 4 DVVSEILLRLPAKAVLRSRAVCRTWRRI 31
>05_07_0304 + 29096274-29096762
Length = 162
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNV 88
+++S I LP+K + + R VC W+ +
Sbjct: 3 DVMSEILLRLPSKSVVRYRAVCRSWRRI 30
>04_03_0708 +
18888085-18889337,18889583-18889661,18890458-18890781
Length = 551
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 8 ILSHIFTFLPAKQLTKCREVCIRWKNVI 91
++ + T LP K L + R VC W++ +
Sbjct: 8 LICEVLTRLPVKSLLRFRSVCRSWRDAV 35
>03_05_0612 +
26117306-26118045,26118151-26118680,26119247-26119278,
26119910-26121175
Length = 855
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNVID 94
++L+ + L + L CR VC W++++D
Sbjct: 9 DVLAEVLRRLAPRSLAACRCVCKPWRDLVD 38
>01_03_0107 -
12613491-12613538,12613906-12614139,12614682-12614713,
12616021-12616176,12617972-12618159,12618242-12618324,
12618821-12618976,12620320-12621162,12621197-12621550,
12621962-12623125
Length = 1085
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = -1
Query: 528 QLS*EILLCAWGYVLVFLL*TNVDCYSSGVLCRRFRHSGCSRRK*LRVCS 379
QL ++L+C +G + V D +SSGV+CR + S R+ L +CS
Sbjct: 27 QLPADLLVCIFGVLEV------PDVFSSGVVCRAWHASFLEARR-LGICS 69
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,633,816
Number of Sequences: 37544
Number of extensions: 335136
Number of successful extensions: 1051
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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