SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1060
         (642 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021444-1|AAX33592.1|  667|Drosophila melanogaster GH02866p pro...    31   1.8  
AE013599-3350|AAF46812.1|  667|Drosophila melanogaster CG6758-PA...    31   1.8  
AY051565-1|AAK92989.1|  496|Drosophila melanogaster GH21352p pro...    30   2.3  
AE014298-2532|AAF48704.1|  496|Drosophila melanogaster CG8918-PA...    30   2.3  
BT001595-1|AAN71350.1|  559|Drosophila melanogaster RE28319p pro...    30   3.1  
AY069210-1|AAL39355.1|  511|Drosophila melanogaster GH26184p pro...    30   3.1  
AE014298-1529|AAF47983.2| 2602|Drosophila melanogaster CG2174-PA...    30   3.1  
AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB...    30   3.1  
AE014297-4385|AAF56899.2|  515|Drosophila melanogaster CG2010-PA...    30   3.1  
AE014297-4384|AAN14173.1|  511|Drosophila melanogaster CG2010-PB...    30   3.1  
AY119098-1|AAM50958.1|  538|Drosophila melanogaster RE01138p pro...    29   5.4  
AF187980-1|AAG17034.1|  538|Drosophila melanogaster Partner of P...    29   5.4  
AE013599-3444|AAF46886.1|  538|Drosophila melanogaster CG9952-PA...    29   5.4  
AY089660-1|AAL90398.1|  262|Drosophila melanogaster RH24258p pro...    28   9.4  
AF145628-1|AAD38603.1|  262|Drosophila melanogaster BcDNA.GH0553...    28   9.4  
AE014134-2310|AAF53270.1|  262|Drosophila melanogaster CG5867-PA...    28   9.4  

>BT021444-1|AAX33592.1|  667|Drosophila melanogaster GH02866p
           protein.
          Length = 667

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +2

Query: 5   EILSHIFTFLPA-KQLTKCREVCIRWKNVIDTL 100
           EIL  IFT+LP    L  C  VC RW  ++  L
Sbjct: 30  EILEFIFTYLPPYGDLEHCSLVCKRWHAIVKNL 62


>AE013599-3350|AAF46812.1|  667|Drosophila melanogaster CG6758-PA
           protein.
          Length = 667

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +2

Query: 5   EILSHIFTFLPA-KQLTKCREVCIRWKNVIDTL 100
           EIL  IFT+LP    L  C  VC RW  ++  L
Sbjct: 30  EILEFIFTYLPPYGDLEHCSLVCKRWHAIVKNL 62


>AY051565-1|AAK92989.1|  496|Drosophila melanogaster GH21352p
           protein.
          Length = 496

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
 Frame = +2

Query: 359 MIWTRYSEQTRSYLRRLQPLCRNRRHSTPDE*QSTFVHNK------KTNT*PQAHSSISH 520
           M+W+R +   R  L  + P+  N RH          + N       + NT P  HS+ ++
Sbjct: 336 MLWSRITATIRHSLDAVAPVMANDRHCFEVYGYDIIIDNNLKPWLIEINTSPSMHSTTTN 395

Query: 521 DNCKLFYVIDNVV 559
           D      +IDNV+
Sbjct: 396 DRMLKSRLIDNVL 408


>AE014298-2532|AAF48704.1|  496|Drosophila melanogaster CG8918-PA
           protein.
          Length = 496

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
 Frame = +2

Query: 359 MIWTRYSEQTRSYLRRLQPLCRNRRHSTPDE*QSTFVHNK------KTNT*PQAHSSISH 520
           M+W+R +   R  L  + P+  N RH          + N       + NT P  HS+ ++
Sbjct: 336 MLWSRITATIRHSLDAVAPVMANDRHCFEVYGYDIIIDNNLKPWLIEINTSPSMHSTTTN 395

Query: 521 DNCKLFYVIDNVV 559
           D      +IDNV+
Sbjct: 396 DRMLKSRLIDNVL 408


>BT001595-1|AAN71350.1|  559|Drosophila melanogaster RE28319p
           protein.
          Length = 559

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = +2

Query: 5   EILSHIFTFLPAKQLTKCREVCIRWKNV 88
           ++L HIF++L  +++ +   +C RW+ +
Sbjct: 84  KVLLHIFSYLSHREICRLARICRRWRQI 111


>AY069210-1|AAL39355.1|  511|Drosophila melanogaster GH26184p
           protein.
          Length = 511

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = +2

Query: 5   EILSHIFTFLPAKQLTKCREVCIRWKNV 88
           ++L HIF++L  +++ +   +C RW+ +
Sbjct: 36  KVLLHIFSYLSHREICRLARICRRWRQI 63


>AE014298-1529|AAF47983.2| 2602|Drosophila melanogaster CG2174-PA,
           isoform A protein.
          Length = 2602

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
 Frame = +2

Query: 170 RLSRPQITWHELYRSLTLWRQLHLARQHSTNSRQQPRWPAKSRASDIYETERP-ASTLKP 346
           RL R  ++     R + + RQL  AR+ +  +R Q RW  + RA   YE  R  A T + 
Sbjct: 751 RLRRAAVSVQRHVRGMLVRRQL--ARRQAAATRLQARWRGQ-RAQQRYERLRKGALTAQR 807

Query: 347 AWCIMIWTRYSEQTRSYLRRLQ 412
            W      R  +Q RS  RR Q
Sbjct: 808 LWRGRQARRRVQQLRSDHRRRQ 829


>AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB,
            isoform B protein.
          Length = 2693

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
 Frame = +2

Query: 170  RLSRPQITWHELYRSLTLWRQLHLARQHSTNSRQQPRWPAKSRASDIYETERP-ASTLKP 346
            RL R  ++     R + + RQL  AR+ +  +R Q RW  + RA   YE  R  A T + 
Sbjct: 842  RLRRAAVSVQRHVRGMLVRRQL--ARRQAAATRLQARWRGQ-RAQQRYERLRKGALTAQR 898

Query: 347  AWCIMIWTRYSEQTRSYLRRLQ 412
             W      R  +Q RS  RR Q
Sbjct: 899  LWRGRQARRRVQQLRSDHRRRQ 920


>AE014297-4385|AAF56899.2|  515|Drosophila melanogaster CG2010-PA,
           isoform A protein.
          Length = 515

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = +2

Query: 5   EILSHIFTFLPAKQLTKCREVCIRWKNV 88
           ++L HIF++L  +++ +   +C RW+ +
Sbjct: 40  KVLLHIFSYLSHREICRLARICRRWRQI 67


>AE014297-4384|AAN14173.1|  511|Drosophila melanogaster CG2010-PB,
           isoform B protein.
          Length = 511

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = +2

Query: 5   EILSHIFTFLPAKQLTKCREVCIRWKNV 88
           ++L HIF++L  +++ +   +C RW+ +
Sbjct: 36  KVLLHIFSYLSHREICRLARICRRWRQI 63


>AY119098-1|AAM50958.1|  538|Drosophila melanogaster RE01138p
           protein.
          Length = 538

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 5   EILSHIFTFLPAKQLTKCREVCIRWKN 85
           E+L  IF  LP + L +  +VC  W++
Sbjct: 155 ELLEQIFEHLPVRDLGRAAQVCTAWRD 181


>AF187980-1|AAG17034.1|  538|Drosophila melanogaster Partner of
           Paired protein.
          Length = 538

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 5   EILSHIFTFLPAKQLTKCREVCIRWKN 85
           E+L  IF  LP + L +  +VC  W++
Sbjct: 155 ELLEQIFEHLPVRDLGRAAQVCTAWRD 181


>AE013599-3444|AAF46886.1|  538|Drosophila melanogaster CG9952-PA
           protein.
          Length = 538

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 5   EILSHIFTFLPAKQLTKCREVCIRWKN 85
           E+L  IF  LP + L +  +VC  W++
Sbjct: 155 ELLEQIFEHLPVRDLGRAAQVCTAWRD 181


>AY089660-1|AAL90398.1|  262|Drosophila melanogaster RH24258p
           protein.
          Length = 262

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -3

Query: 250 LSSEVQLPPQSQRPVELVPSDLRT 179
           L++E++LPP   +PV  +P D+ T
Sbjct: 18  LAAEIELPPVEFKPVREIPGDIPT 41


>AF145628-1|AAD38603.1|  262|Drosophila melanogaster BcDNA.GH05536
           protein.
          Length = 262

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -3

Query: 250 LSSEVQLPPQSQRPVELVPSDLRT 179
           L++E++LPP   +PV  +P D+ T
Sbjct: 18  LAAEIELPPVEFKPVREIPGDIPT 41


>AE014134-2310|AAF53270.1|  262|Drosophila melanogaster CG5867-PA
           protein.
          Length = 262

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -3

Query: 250 LSSEVQLPPQSQRPVELVPSDLRT 179
           L++E++LPP   +PV  +P D+ T
Sbjct: 18  LAAEIELPPVEFKPVREIPGDIPT 41


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,215,937
Number of Sequences: 53049
Number of extensions: 586744
Number of successful extensions: 2106
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2104
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -