Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1060
(642 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021444-1|AAX33592.1| 667|Drosophila melanogaster GH02866p pro... 31 1.8
AE013599-3350|AAF46812.1| 667|Drosophila melanogaster CG6758-PA... 31 1.8
AY051565-1|AAK92989.1| 496|Drosophila melanogaster GH21352p pro... 30 2.3
AE014298-2532|AAF48704.1| 496|Drosophila melanogaster CG8918-PA... 30 2.3
BT001595-1|AAN71350.1| 559|Drosophila melanogaster RE28319p pro... 30 3.1
AY069210-1|AAL39355.1| 511|Drosophila melanogaster GH26184p pro... 30 3.1
AE014298-1529|AAF47983.2| 2602|Drosophila melanogaster CG2174-PA... 30 3.1
AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB... 30 3.1
AE014297-4385|AAF56899.2| 515|Drosophila melanogaster CG2010-PA... 30 3.1
AE014297-4384|AAN14173.1| 511|Drosophila melanogaster CG2010-PB... 30 3.1
AY119098-1|AAM50958.1| 538|Drosophila melanogaster RE01138p pro... 29 5.4
AF187980-1|AAG17034.1| 538|Drosophila melanogaster Partner of P... 29 5.4
AE013599-3444|AAF46886.1| 538|Drosophila melanogaster CG9952-PA... 29 5.4
AY089660-1|AAL90398.1| 262|Drosophila melanogaster RH24258p pro... 28 9.4
AF145628-1|AAD38603.1| 262|Drosophila melanogaster BcDNA.GH0553... 28 9.4
AE014134-2310|AAF53270.1| 262|Drosophila melanogaster CG5867-PA... 28 9.4
>BT021444-1|AAX33592.1| 667|Drosophila melanogaster GH02866p
protein.
Length = 667
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 5 EILSHIFTFLPA-KQLTKCREVCIRWKNVIDTL 100
EIL IFT+LP L C VC RW ++ L
Sbjct: 30 EILEFIFTYLPPYGDLEHCSLVCKRWHAIVKNL 62
>AE013599-3350|AAF46812.1| 667|Drosophila melanogaster CG6758-PA
protein.
Length = 667
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 5 EILSHIFTFLPA-KQLTKCREVCIRWKNVIDTL 100
EIL IFT+LP L C VC RW ++ L
Sbjct: 30 EILEFIFTYLPPYGDLEHCSLVCKRWHAIVKNL 62
>AY051565-1|AAK92989.1| 496|Drosophila melanogaster GH21352p
protein.
Length = 496
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Frame = +2
Query: 359 MIWTRYSEQTRSYLRRLQPLCRNRRHSTPDE*QSTFVHNK------KTNT*PQAHSSISH 520
M+W+R + R L + P+ N RH + N + NT P HS+ ++
Sbjct: 336 MLWSRITATIRHSLDAVAPVMANDRHCFEVYGYDIIIDNNLKPWLIEINTSPSMHSTTTN 395
Query: 521 DNCKLFYVIDNVV 559
D +IDNV+
Sbjct: 396 DRMLKSRLIDNVL 408
>AE014298-2532|AAF48704.1| 496|Drosophila melanogaster CG8918-PA
protein.
Length = 496
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Frame = +2
Query: 359 MIWTRYSEQTRSYLRRLQPLCRNRRHSTPDE*QSTFVHNK------KTNT*PQAHSSISH 520
M+W+R + R L + P+ N RH + N + NT P HS+ ++
Sbjct: 336 MLWSRITATIRHSLDAVAPVMANDRHCFEVYGYDIIIDNNLKPWLIEINTSPSMHSTTTN 395
Query: 521 DNCKLFYVIDNVV 559
D +IDNV+
Sbjct: 396 DRMLKSRLIDNVL 408
>BT001595-1|AAN71350.1| 559|Drosophila melanogaster RE28319p
protein.
Length = 559
Score = 29.9 bits (64), Expect = 3.1
Identities = 8/28 (28%), Positives = 19/28 (67%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNV 88
++L HIF++L +++ + +C RW+ +
Sbjct: 84 KVLLHIFSYLSHREICRLARICRRWRQI 111
>AY069210-1|AAL39355.1| 511|Drosophila melanogaster GH26184p
protein.
Length = 511
Score = 29.9 bits (64), Expect = 3.1
Identities = 8/28 (28%), Positives = 19/28 (67%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNV 88
++L HIF++L +++ + +C RW+ +
Sbjct: 36 KVLLHIFSYLSHREICRLARICRRWRQI 63
>AE014298-1529|AAF47983.2| 2602|Drosophila melanogaster CG2174-PA,
isoform A protein.
Length = 2602
Score = 29.9 bits (64), Expect = 3.1
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 170 RLSRPQITWHELYRSLTLWRQLHLARQHSTNSRQQPRWPAKSRASDIYETERP-ASTLKP 346
RL R ++ R + + RQL AR+ + +R Q RW + RA YE R A T +
Sbjct: 751 RLRRAAVSVQRHVRGMLVRRQL--ARRQAAATRLQARWRGQ-RAQQRYERLRKGALTAQR 807
Query: 347 AWCIMIWTRYSEQTRSYLRRLQ 412
W R +Q RS RR Q
Sbjct: 808 LWRGRQARRRVQQLRSDHRRRQ 829
>AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB,
isoform B protein.
Length = 2693
Score = 29.9 bits (64), Expect = 3.1
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 170 RLSRPQITWHELYRSLTLWRQLHLARQHSTNSRQQPRWPAKSRASDIYETERP-ASTLKP 346
RL R ++ R + + RQL AR+ + +R Q RW + RA YE R A T +
Sbjct: 842 RLRRAAVSVQRHVRGMLVRRQL--ARRQAAATRLQARWRGQ-RAQQRYERLRKGALTAQR 898
Query: 347 AWCIMIWTRYSEQTRSYLRRLQ 412
W R +Q RS RR Q
Sbjct: 899 LWRGRQARRRVQQLRSDHRRRQ 920
>AE014297-4385|AAF56899.2| 515|Drosophila melanogaster CG2010-PA,
isoform A protein.
Length = 515
Score = 29.9 bits (64), Expect = 3.1
Identities = 8/28 (28%), Positives = 19/28 (67%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNV 88
++L HIF++L +++ + +C RW+ +
Sbjct: 40 KVLLHIFSYLSHREICRLARICRRWRQI 67
>AE014297-4384|AAN14173.1| 511|Drosophila melanogaster CG2010-PB,
isoform B protein.
Length = 511
Score = 29.9 bits (64), Expect = 3.1
Identities = 8/28 (28%), Positives = 19/28 (67%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNV 88
++L HIF++L +++ + +C RW+ +
Sbjct: 36 KVLLHIFSYLSHREICRLARICRRWRQI 63
>AY119098-1|AAM50958.1| 538|Drosophila melanogaster RE01138p
protein.
Length = 538
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKN 85
E+L IF LP + L + +VC W++
Sbjct: 155 ELLEQIFEHLPVRDLGRAAQVCTAWRD 181
>AF187980-1|AAG17034.1| 538|Drosophila melanogaster Partner of
Paired protein.
Length = 538
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKN 85
E+L IF LP + L + +VC W++
Sbjct: 155 ELLEQIFEHLPVRDLGRAAQVCTAWRD 181
>AE013599-3444|AAF46886.1| 538|Drosophila melanogaster CG9952-PA
protein.
Length = 538
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKN 85
E+L IF LP + L + +VC W++
Sbjct: 155 ELLEQIFEHLPVRDLGRAAQVCTAWRD 181
>AY089660-1|AAL90398.1| 262|Drosophila melanogaster RH24258p
protein.
Length = 262
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -3
Query: 250 LSSEVQLPPQSQRPVELVPSDLRT 179
L++E++LPP +PV +P D+ T
Sbjct: 18 LAAEIELPPVEFKPVREIPGDIPT 41
>AF145628-1|AAD38603.1| 262|Drosophila melanogaster BcDNA.GH05536
protein.
Length = 262
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -3
Query: 250 LSSEVQLPPQSQRPVELVPSDLRT 179
L++E++LPP +PV +P D+ T
Sbjct: 18 LAAEIELPPVEFKPVREIPGDIPT 41
>AE014134-2310|AAF53270.1| 262|Drosophila melanogaster CG5867-PA
protein.
Length = 262
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -3
Query: 250 LSSEVQLPPQSQRPVELVPSDLRT 179
L++E++LPP +PV +P D+ T
Sbjct: 18 LAAEIELPPVEFKPVREIPGDIPT 41
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,215,937
Number of Sequences: 53049
Number of extensions: 586744
Number of successful extensions: 2106
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2104
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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