BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1060 (642 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT021444-1|AAX33592.1| 667|Drosophila melanogaster GH02866p pro... 31 1.8 AE013599-3350|AAF46812.1| 667|Drosophila melanogaster CG6758-PA... 31 1.8 AY051565-1|AAK92989.1| 496|Drosophila melanogaster GH21352p pro... 30 2.3 AE014298-2532|AAF48704.1| 496|Drosophila melanogaster CG8918-PA... 30 2.3 BT001595-1|AAN71350.1| 559|Drosophila melanogaster RE28319p pro... 30 3.1 AY069210-1|AAL39355.1| 511|Drosophila melanogaster GH26184p pro... 30 3.1 AE014298-1529|AAF47983.2| 2602|Drosophila melanogaster CG2174-PA... 30 3.1 AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB... 30 3.1 AE014297-4385|AAF56899.2| 515|Drosophila melanogaster CG2010-PA... 30 3.1 AE014297-4384|AAN14173.1| 511|Drosophila melanogaster CG2010-PB... 30 3.1 AY119098-1|AAM50958.1| 538|Drosophila melanogaster RE01138p pro... 29 5.4 AF187980-1|AAG17034.1| 538|Drosophila melanogaster Partner of P... 29 5.4 AE013599-3444|AAF46886.1| 538|Drosophila melanogaster CG9952-PA... 29 5.4 AY089660-1|AAL90398.1| 262|Drosophila melanogaster RH24258p pro... 28 9.4 AF145628-1|AAD38603.1| 262|Drosophila melanogaster BcDNA.GH0553... 28 9.4 AE014134-2310|AAF53270.1| 262|Drosophila melanogaster CG5867-PA... 28 9.4 >BT021444-1|AAX33592.1| 667|Drosophila melanogaster GH02866p protein. Length = 667 Score = 30.7 bits (66), Expect = 1.8 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Frame = +2 Query: 5 EILSHIFTFLPA-KQLTKCREVCIRWKNVIDTL 100 EIL IFT+LP L C VC RW ++ L Sbjct: 30 EILEFIFTYLPPYGDLEHCSLVCKRWHAIVKNL 62 >AE013599-3350|AAF46812.1| 667|Drosophila melanogaster CG6758-PA protein. Length = 667 Score = 30.7 bits (66), Expect = 1.8 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Frame = +2 Query: 5 EILSHIFTFLPA-KQLTKCREVCIRWKNVIDTL 100 EIL IFT+LP L C VC RW ++ L Sbjct: 30 EILEFIFTYLPPYGDLEHCSLVCKRWHAIVKNL 62 >AY051565-1|AAK92989.1| 496|Drosophila melanogaster GH21352p protein. Length = 496 Score = 30.3 bits (65), Expect = 2.3 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 6/73 (8%) Frame = +2 Query: 359 MIWTRYSEQTRSYLRRLQPLCRNRRHSTPDE*QSTFVHNK------KTNT*PQAHSSISH 520 M+W+R + R L + P+ N RH + N + NT P HS+ ++ Sbjct: 336 MLWSRITATIRHSLDAVAPVMANDRHCFEVYGYDIIIDNNLKPWLIEINTSPSMHSTTTN 395 Query: 521 DNCKLFYVIDNVV 559 D +IDNV+ Sbjct: 396 DRMLKSRLIDNVL 408 >AE014298-2532|AAF48704.1| 496|Drosophila melanogaster CG8918-PA protein. Length = 496 Score = 30.3 bits (65), Expect = 2.3 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 6/73 (8%) Frame = +2 Query: 359 MIWTRYSEQTRSYLRRLQPLCRNRRHSTPDE*QSTFVHNK------KTNT*PQAHSSISH 520 M+W+R + R L + P+ N RH + N + NT P HS+ ++ Sbjct: 336 MLWSRITATIRHSLDAVAPVMANDRHCFEVYGYDIIIDNNLKPWLIEINTSPSMHSTTTN 395 Query: 521 DNCKLFYVIDNVV 559 D +IDNV+ Sbjct: 396 DRMLKSRLIDNVL 408 >BT001595-1|AAN71350.1| 559|Drosophila melanogaster RE28319p protein. Length = 559 Score = 29.9 bits (64), Expect = 3.1 Identities = 8/28 (28%), Positives = 19/28 (67%) Frame = +2 Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNV 88 ++L HIF++L +++ + +C RW+ + Sbjct: 84 KVLLHIFSYLSHREICRLARICRRWRQI 111 >AY069210-1|AAL39355.1| 511|Drosophila melanogaster GH26184p protein. Length = 511 Score = 29.9 bits (64), Expect = 3.1 Identities = 8/28 (28%), Positives = 19/28 (67%) Frame = +2 Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNV 88 ++L HIF++L +++ + +C RW+ + Sbjct: 36 KVLLHIFSYLSHREICRLARICRRWRQI 63 >AE014298-1529|AAF47983.2| 2602|Drosophila melanogaster CG2174-PA, isoform A protein. Length = 2602 Score = 29.9 bits (64), Expect = 3.1 Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 1/82 (1%) Frame = +2 Query: 170 RLSRPQITWHELYRSLTLWRQLHLARQHSTNSRQQPRWPAKSRASDIYETERP-ASTLKP 346 RL R ++ R + + RQL AR+ + +R Q RW + RA YE R A T + Sbjct: 751 RLRRAAVSVQRHVRGMLVRRQL--ARRQAAATRLQARWRGQ-RAQQRYERLRKGALTAQR 807 Query: 347 AWCIMIWTRYSEQTRSYLRRLQ 412 W R +Q RS RR Q Sbjct: 808 LWRGRQARRRVQQLRSDHRRRQ 829 >AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB, isoform B protein. Length = 2693 Score = 29.9 bits (64), Expect = 3.1 Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 1/82 (1%) Frame = +2 Query: 170 RLSRPQITWHELYRSLTLWRQLHLARQHSTNSRQQPRWPAKSRASDIYETERP-ASTLKP 346 RL R ++ R + + RQL AR+ + +R Q RW + RA YE R A T + Sbjct: 842 RLRRAAVSVQRHVRGMLVRRQL--ARRQAAATRLQARWRGQ-RAQQRYERLRKGALTAQR 898 Query: 347 AWCIMIWTRYSEQTRSYLRRLQ 412 W R +Q RS RR Q Sbjct: 899 LWRGRQARRRVQQLRSDHRRRQ 920 >AE014297-4385|AAF56899.2| 515|Drosophila melanogaster CG2010-PA, isoform A protein. Length = 515 Score = 29.9 bits (64), Expect = 3.1 Identities = 8/28 (28%), Positives = 19/28 (67%) Frame = +2 Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNV 88 ++L HIF++L +++ + +C RW+ + Sbjct: 40 KVLLHIFSYLSHREICRLARICRRWRQI 67 >AE014297-4384|AAN14173.1| 511|Drosophila melanogaster CG2010-PB, isoform B protein. Length = 511 Score = 29.9 bits (64), Expect = 3.1 Identities = 8/28 (28%), Positives = 19/28 (67%) Frame = +2 Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKNV 88 ++L HIF++L +++ + +C RW+ + Sbjct: 36 KVLLHIFSYLSHREICRLARICRRWRQI 63 >AY119098-1|AAM50958.1| 538|Drosophila melanogaster RE01138p protein. Length = 538 Score = 29.1 bits (62), Expect = 5.4 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = +2 Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKN 85 E+L IF LP + L + +VC W++ Sbjct: 155 ELLEQIFEHLPVRDLGRAAQVCTAWRD 181 >AF187980-1|AAG17034.1| 538|Drosophila melanogaster Partner of Paired protein. Length = 538 Score = 29.1 bits (62), Expect = 5.4 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = +2 Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKN 85 E+L IF LP + L + +VC W++ Sbjct: 155 ELLEQIFEHLPVRDLGRAAQVCTAWRD 181 >AE013599-3444|AAF46886.1| 538|Drosophila melanogaster CG9952-PA protein. Length = 538 Score = 29.1 bits (62), Expect = 5.4 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = +2 Query: 5 EILSHIFTFLPAKQLTKCREVCIRWKN 85 E+L IF LP + L + +VC W++ Sbjct: 155 ELLEQIFEHLPVRDLGRAAQVCTAWRD 181 >AY089660-1|AAL90398.1| 262|Drosophila melanogaster RH24258p protein. Length = 262 Score = 28.3 bits (60), Expect = 9.4 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = -3 Query: 250 LSSEVQLPPQSQRPVELVPSDLRT 179 L++E++LPP +PV +P D+ T Sbjct: 18 LAAEIELPPVEFKPVREIPGDIPT 41 >AF145628-1|AAD38603.1| 262|Drosophila melanogaster BcDNA.GH05536 protein. Length = 262 Score = 28.3 bits (60), Expect = 9.4 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = -3 Query: 250 LSSEVQLPPQSQRPVELVPSDLRT 179 L++E++LPP +PV +P D+ T Sbjct: 18 LAAEIELPPVEFKPVREIPGDIPT 41 >AE014134-2310|AAF53270.1| 262|Drosophila melanogaster CG5867-PA protein. Length = 262 Score = 28.3 bits (60), Expect = 9.4 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = -3 Query: 250 LSSEVQLPPQSQRPVELVPSDLRT 179 L++E++LPP +PV +P D+ T Sbjct: 18 LAAEIELPPVEFKPVREIPGDIPT 41 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 28,215,937 Number of Sequences: 53049 Number of extensions: 586744 Number of successful extensions: 2106 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1805 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2104 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2703623850 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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