Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1056
(503 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 26 0.22
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 26 0.22
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 26 0.22
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 22 2.7
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 22 2.7
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 22 2.7
AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve co... 22 3.6
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 22 3.6
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 4.7
EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic hor... 21 6.3
DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic hor... 21 6.3
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 25.8 bits (54), Expect = 0.22
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 23 VTFWFEIRTSEFERHVSWKNRDGCQSRRERLFTGGHR--QRNKTAAPPRTQHDSRHRH 190
+ WF+ R + ++ + Q+RRER H+ Q+ K + H S H+H
Sbjct: 50 IKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQH 107
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 25.8 bits (54), Expect = 0.22
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 23 VTFWFEIRTSEFERHVSWKNRDGCQSRRERLFTGGHR--QRNKTAAPPRTQHDSRHRH 190
+ WF+ R + ++ + Q+RRER H+ Q+ K + H S H+H
Sbjct: 201 IKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQH 258
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 25.8 bits (54), Expect = 0.22
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +2
Query: 23 VTFWFEIRTSEFERHVSWKNRDGCQSRRERLFTGGHR--QRNKTAAPPRTQHDSRHRH 190
+ WF+ R + ++ + Q+RRER H+ Q+ K + H S H+H
Sbjct: 260 IKIWFQNRRMKLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQH 317
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 22.2 bits (45), Expect = 2.7
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 133 PMPSREESFPTALTTVSVFP 74
P P R ESF + TVS P
Sbjct: 734 PPPPRVESFAETVRTVSKIP 753
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 22.2 bits (45), Expect = 2.7
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = -3
Query: 141 FLCRCPP 121
F+CRCPP
Sbjct: 166 FMCRCPP 172
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 22.2 bits (45), Expect = 2.7
Identities = 7/29 (24%), Positives = 17/29 (58%)
Frame = +1
Query: 295 HHSIKRERAQRGICSLVSSTPNKFTGFAN 381
H+ + RE ++G+C++ ++ F+N
Sbjct: 132 HNLVGREGCKKGVCTMEINSDTMCVTFSN 160
>AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve cord
defective protein protein.
Length = 168
Score = 21.8 bits (44), Expect = 3.6
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = +2
Query: 110 RLFTGGHRQRNKTAAPPRTQHDSRHRHPV 196
+++ HR + K A + HD ++ +P+
Sbjct: 85 KIWFQNHRYKTKRAQHEKGMHDQQNNNPL 113
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 21.8 bits (44), Expect = 3.6
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -2
Query: 130 MPSREESF--PTALTTVSVFPRHVSLKLRRSYFE 35
MP+ E F PT S+ ++V+ K+R Y+E
Sbjct: 326 MPNDFEEFVHPTVAKRGSITSKNVANKIRDFYYE 359
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 21.4 bits (43), Expect = 4.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 379 LRIP*TYLVCWRLNC 335
L + Y VCW+ NC
Sbjct: 752 LHLDWNYPVCWQSNC 766
>EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 21.0 bits (42), Expect = 6.3
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = -2
Query: 175 IMLGSWWGGSFVSLP 131
++LG+W G + S+P
Sbjct: 171 MLLGAWLGATLCSIP 185
>DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 21.0 bits (42), Expect = 6.3
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = -2
Query: 175 IMLGSWWGGSFVSLP 131
++LG+W G + S+P
Sbjct: 171 MLLGAWLGATLCSIP 185
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,324
Number of Sequences: 336
Number of extensions: 2308
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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