Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1054X
         (407 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    25   0.38 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   0.87 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   1.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   2.7  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   3.5  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   4.6  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   4.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    20   8.1  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 24.6 bits (51), Expect = 0.38
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +1

Query: 142 YDIVQKYLKLANYFEVGSDEFLQTLKKLK 228
           YD  +  L  A + E+ +D+FL+TLK +K
Sbjct: 118 YDFSET-LTRAKFEELNNDQFLKTLKPVK 145


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.4 bits (48), Expect = 0.87
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = +1

Query: 154 QKYLKLANYFEVGSDEFLQTLKKLKLRFFTSKEICS*CHFLVSIVFLRLLQGHNVIGFLE 333
           Q +  LANY  + SDEF   + K++      K      + +  I FL L+  ++ + F+ 
Sbjct: 159 QMHRLLANYKVITSDEFFYLVSKIESLACELKNTVDDFNDIFGISFL-LIISYSTLHFVN 217

Query: 334 IV 339
            +
Sbjct: 218 YI 219


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 282 YSFPKTVTRAQCYRLLGNSVDVKVISELLQISS 380
           +SF   +TR  C  L G  V  + I  LL ++S
Sbjct: 322 WSFALLITRIVCLCLFGAKVHDESIKPLLTLNS 354


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 96  HTLCRRYRLCVH 131
           H LC +Y  CVH
Sbjct: 485 HELCDKYYRCVH 496


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory
          receptor candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 3.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 77 HDLLESA*QMSNIFAFLNILSGTK 6
          HD+++    ++ IF FL + S  K
Sbjct: 12 HDVIKPLINLTKIFGFLPVCSSQK 35


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 136 TSYDIVQKYLKLANY 180
           T  D+++KYL  A Y
Sbjct: 442 TQADVIEKYLSKARY 456


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +1

Query: 187 VGSDEFLQTLKKLKLRFFTSKEICS*CHFLVSI 285
           V +   + T    +L+FF  + +   C+  VSI
Sbjct: 24  VATGNIIHTTSNKQLQFFAVEHLLIQCYIAVSI 56


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 11/50 (22%), Positives = 24/50 (48%)
 Frame = +1

Query: 142 YDIVQKYLKLANYFEVGSDEFLQTLKKLKLRFFTSKEICS*CHFLVSIVF 291
           +++V+K+L       V S+ F       +  +F   +  S C F+ ++V+
Sbjct: 3   HEVVKKFLHSVRIVFVQSEIFCLVNFNHRESYFRLSKAKSFCTFVAALVY 52


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,511
Number of Sequences: 336
Number of extensions: 1947
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)