Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1053
         (349 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   0.51 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   0.89 
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    22   2.1  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   2.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   2.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   3.6  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   4.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   4.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   4.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   8.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   8.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   8.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   8.3  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 0.51
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -3

Query: 152 YSKRYYAIDSVLACLTFFFHRIYSFSKGQSEHFC 51
           +S R   + S + CL  F HR   F   +++ FC
Sbjct: 11  HSVRIVFVQSEIFCLVNFNHRESYFRLSKAKSFC 44


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 0.89
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 23  IIVSSKLVNRKNVQIALWRKSRSDGRKTSS 112
           II    ++    V +ALW + R  GRK  S
Sbjct: 44  IIFLVTVIGNSTVLLALWTRRRYAGRKKLS 73


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -3

Query: 206 LKTTMFQYQGSDSYNCTHYSKRYYAI 129
           LKT M  + G   Y C H  +++  +
Sbjct: 25  LKTHMRLHTGERPYRCEHCDRQFVQV 50


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 13  KLKNNCF*QIS*SQKCSDCPLEK 81
           K  NNC   +   +KC +C L+K
Sbjct: 225 KYGNNCEIDMYMRRKCQECRLKK 247


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -3

Query: 206 LKTTMFQYQGSDSYNCTHYSKRYYAI 129
           LKT M  + G   Y C H  +++  +
Sbjct: 178 LKTHMRLHTGERPYRCEHCDRQFVQV 203


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 3.6
 Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = -2

Query: 297 LNCFYY-YCCFFVGTLLVEY*SC 232
           L C YY YC F + T+ + +  C
Sbjct: 143 LLCIYYFYCAFIIFTVHLLFLLC 165



 Score = 20.2 bits (40), Expect = 6.3
 Identities = 13/61 (21%), Positives = 27/61 (44%)
 Frame = -3

Query: 257 LFLWNIDHVTAHCTICLLKTTMFQYQGSDSYNCTHYSKRYYAIDSVLACLTFFFHRIYSF 78
           LFL  +D+ T H    L    ++ +  +      H    +Y +  +L C+ +F++    F
Sbjct: 194 LFLLCLDYFTLHL---LFLPCIYYFYSAFIIFTIHLL--FYCVLIILLCIYYFYYAFILF 248

Query: 77  S 75
           +
Sbjct: 249 T 249



 Score = 20.2 bits (40), Expect = 6.3
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 297 LNCFYYYCCFFV 262
           L C YY+C  F+
Sbjct: 295 LLCIYYFCRAFI 306


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 45  TNLLETIIFQFYLY 4
           TNLL  +  QF++Y
Sbjct: 129 TNLLRNVSVQFFVY 142


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 29  VSSKLVNRKNVQIALWRKSRSD 94
           VSS++ N +   +  WR  R D
Sbjct: 321 VSSEIYNVEYKNVEFWRNIRED 342



 Score = 20.2 bits (40), Expect = 6.3
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = -2

Query: 120 SRVLDVFLPSDLLFLQRAI*TFLRLTNLLETIIFQFYLYC 1
           S + ++ L  +   L R    F+ + +LL  +IF   ++C
Sbjct: 96  STLFEILLKLESKDLSRTFYGFVIVAHLLFLVIFVLNIWC 135


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 45  TNLLETIIFQFYLY 4
           TNLL  +  QF++Y
Sbjct: 129 TNLLRNVSVQFFVY 142


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -3

Query: 155  HYSKRYYAIDSVLACLTFFF 96
            H SK Y  ++ +     FFF
Sbjct: 1315 HISKEYLQLEPIGLVFVFFF 1334


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -3

Query: 155  HYSKRYYAIDSVLACLTFFF 96
            H SK Y  ++ +     FFF
Sbjct: 1315 HISKEYLQLEPIGLVFVFFF 1334


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -3

Query: 155  HYSKRYYAIDSVLACLTFFF 96
            H SK Y  ++ +     FFF
Sbjct: 1315 HISKEYLQLEPIGLVFVFFF 1334


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -3

Query: 155  HYSKRYYAIDSVLACLTFFF 96
            H SK Y  ++ +     FFF
Sbjct: 1315 HISKEYLQLEPIGLVFVFFF 1334


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,198
Number of Sequences: 336
Number of extensions: 1301
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)