Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1053
         (349 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011526-1|AAS15662.1|   49|Drosophila melanogaster RH17559p pro...    36   0.011
AE014296-667|AAN11567.1|   49|Drosophila melanogaster CG32267-PA...    36   0.011
AE014297-4082|AAN14398.1|  439|Drosophila melanogaster CG31065-P...    28   2.8  
BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p pro...    27   6.5  
AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-P...    27   6.5  

>BT011526-1|AAS15662.1|   49|Drosophila melanogaster RH17559p
           protein.
          Length = 49

 Score = 36.3 bits (80), Expect = 0.011
 Identities = 19/46 (41%), Positives = 28/46 (60%)
 Frame = +3

Query: 57  MFRLPFGERVDPMEEKRQARENTINSVITFGIMCAIIRIAPLVLEH 194
           MFRL   +     E+KR A E   N ++ FG + A +R+AP+VL+H
Sbjct: 1   MFRLQQSQPDPAEEQKRVAAEVRFNFIL-FGAVIAAVRLAPIVLKH 45


>AE014296-667|AAN11567.1|   49|Drosophila melanogaster CG32267-PA
           protein.
          Length = 49

 Score = 36.3 bits (80), Expect = 0.011
 Identities = 19/46 (41%), Positives = 28/46 (60%)
 Frame = +3

Query: 57  MFRLPFGERVDPMEEKRQARENTINSVITFGIMCAIIRIAPLVLEH 194
           MFRL   +     E+KR A E   N ++ FG + A +R+AP+VL+H
Sbjct: 1   MFRLQQSQPDPAEEQKRVAAEVRFNFIL-FGAVIAAVRLAPIVLKH 45


>AE014297-4082|AAN14398.1|  439|Drosophila melanogaster CG31065-PA
           protein.
          Length = 439

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
 Frame = -2

Query: 288 FYYYC-CFFVGTLLVEY*SCHCTLHY--LPTENYHVPV 184
           FY Y  C    T+L++  +C+CT H+  +P +NY +PV
Sbjct: 253 FYSYSGCVVECTVLLQLDNCNCTSHFMAIPGQNY-LPV 289


>BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p
           protein.
          Length = 2286

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 294 NCFYYYCCFFVGTLLVEY*SCHCTLHY 214
           NC  YY CFF G L  ++  C   LH+
Sbjct: 703 NCNAYYHCFFAGELQQQF--CPSGLHW 727


>AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-PA
           protein.
          Length = 2286

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 294 NCFYYYCCFFVGTLLVEY*SCHCTLHY 214
           NC  YY CFF G L  ++  C   LH+
Sbjct: 703 NCNAYYHCFFAGELQQQF--CPSGLHW 727


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,466,889
Number of Sequences: 53049
Number of extensions: 191638
Number of successful extensions: 482
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 480
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)