Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1051X
         (412 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   2.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   6.2  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    20   8.2  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    20   8.2  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 2.7
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +2

Query: 23  LPNVVCNL*FVFVTCLCYNPYDFENLFIFK*HISIYPVNL 142
           +  V   L  VFV  LC++PY   +L     HI     N+
Sbjct: 282 IKTVKMTLVIVFVFVLCWSPYIVFDLLQVYGHIPKTQTNI 321


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 313 IIIIYPDINNHSTPESGI 366
           I I+Y ++N++S PE  I
Sbjct: 387 INILYANMNSYSVPEPTI 404



 Score = 20.2 bits (40), Expect = 8.2
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = -2

Query: 372 WTYARLRSRMVIDIWVD 322
           W Y +L     + +WVD
Sbjct: 238 WAYEKLNVNDGLQLWVD 254


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +3

Query: 366 RSKIWGTMQDYAR 404
           R KI+G +++Y R
Sbjct: 339 REKIYGVLEEYTR 351


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 316 LFRSWILGILYNIWYFLIV 260
           L R  ILG+L  ++ FLIV
Sbjct: 495 LNRKTILGVLNALFTFLIV 513


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,992
Number of Sequences: 336
Number of extensions: 1787
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)