Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1048
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   2.8  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   3.8  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   3.8  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   3.8  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   5.0  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   5.0  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   5.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.7  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = -2

Query: 591 QMKVAGCTEEDLTACYRLGSNTNKPRP 511
           Q   A CTE+  TA YR      K  P
Sbjct: 69  QTNCAKCTEKQRTAAYRSIKRLKKEYP 95


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 562 LFCATSHLHLVG*YTHNCCCW 624
           L+  T++LH++     NC  W
Sbjct: 156 LYHTTAYLHIITMINMNCALW 176


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 562 LFCATSHLHLVG*YTHNCCCW 624
           L+  T++LH++     NC  W
Sbjct: 156 LYHTTAYLHIITMINMNCALW 176


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 562 LFCATSHLHLVG*YTHNCCCW 624
           L+  T++LH++     NC  W
Sbjct: 156 LYHTTAYLHIITMINMNCALW 176


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 228 SSGKSHDEPKTAPKSAAEREIGKR 157
           S G  H + +T+P     +E+G R
Sbjct: 151 SPGSGHQDSRTSPSGQHLQELGLR 174


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 228 SSGKSHDEPKTAPKSAAEREIGKR 157
           S G  H + +T+P     +E+G R
Sbjct: 151 SPGSGHQDSRTSPSGQHLQELGLR 174


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 228 SSGKSHDEPKTAPKSAAEREIGKR 157
           S G  H + +T+P     +E+G R
Sbjct: 151 SPGSGHQDSRTSPSGQHLQELGLR 174


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 598 NQPNEGGWLHRRGL 557
           +QP +  W+H RGL
Sbjct: 336 DQPQDVYWMHFRGL 349


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,639
Number of Sequences: 336
Number of extensions: 2916
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)