Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1048
         (640 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   2.7  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   2.7  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   2.7  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   2.7  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   8.2  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   8.2  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -2

Query: 282 SASENQVSLAQKAQGAPQSSGKSHDEPKTAPKSAAEREI 166
           ++S +  SL  + QG  +S   SH   K +PK   E ++
Sbjct: 362 NSSPSTPSLMNERQGGYESQASSHSSFKQSPKPEDEFKV 400


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -2

Query: 282 SASENQVSLAQKAQGAPQSSGKSHDEPKTAPKSAAEREI 166
           ++S +  SL  + QG  +S   SH   K +PK   E ++
Sbjct: 362 NSSPSTPSLMNERQGGYESQASSHSSFKQSPKPEDEFKV 400


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -2

Query: 282 SASENQVSLAQKAQGAPQSSGKSHDEPKTAPKSAAEREI 166
           ++S +  SL  + QG  +S   SH   K +PK   E ++
Sbjct: 314 NSSPSTPSLMNERQGGYESQASSHSSFKQSPKPEDEFKV 352


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -2

Query: 282 SASENQVSLAQKAQGAPQSSGKSHDEPKTAPKSAAEREI 166
           ++S +  SL  + QG  +S   SH   K +PK   E ++
Sbjct: 322 NSSPSTPSLMNERQGGYESQASSHSSFKQSPKPEDEFKV 360


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 221 GNLMTNPRRHQNQRQSEKSARGRLVESSMAVS*TY 117
           G+     ++HQ Q+Q  K  +  L+E S   + T+
Sbjct: 364 GSSQQQQQQHQQQQQKRKRPKPELIEISPGQNETF 398


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 383  RSHFGVKRCWTTDGKII 333
            R+HFG ++ WT D  +I
Sbjct: 1345 RNHFGKEKKWTFDKTLI 1361


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,728
Number of Sequences: 2352
Number of extensions: 11604
Number of successful extensions: 41
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)