BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1048 (640 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC004285-1|AAH04285.1| 498|Homo sapiens TCHP protein protein. 31 2.6 AY007230-1|AAG12971.1| 498|Homo sapiens tumor suppressor protei... 31 2.6 AK092736-1|BAC03960.1| 498|Homo sapiens protein ( Homo sapiens ... 31 2.6 U82467-1|AAB53699.1| 561|Homo sapiens tub homolog protein. 30 6.0 BC075032-1|AAH75032.1| 561|Homo sapiens tubby homolog (mouse) p... 30 6.0 BC075031-1|AAH75031.1| 561|Homo sapiens tubby homolog (mouse) p... 30 6.0 AL132874-5|CAI42607.1| 451|Homo sapiens minichromosome maintena... 30 6.0 >BC004285-1|AAH04285.1| 498|Homo sapiens TCHP protein protein. Length = 498 Score = 31.5 bits (68), Expect = 2.6 Identities = 17/61 (27%), Positives = 37/61 (60%) Frame = -3 Query: 314 KRSKIEQMFELQHLKTKFPSLKKRKELLSHLGNLMTNPRRHQNQRQSEKSARGRLVESSM 135 ++ +I++ E Q+ + + SLK R++L+ +L + RR + + + KSAR + +E+ + Sbjct: 383 RQQQIQEKIE-QNRRAQEESLKHREQLIRNLEEVRELARREKEESEKLKSARKQELEAQV 441 Query: 134 A 132 A Sbjct: 442 A 442 >AY007230-1|AAG12971.1| 498|Homo sapiens tumor suppressor protein protein. Length = 498 Score = 31.5 bits (68), Expect = 2.6 Identities = 17/61 (27%), Positives = 37/61 (60%) Frame = -3 Query: 314 KRSKIEQMFELQHLKTKFPSLKKRKELLSHLGNLMTNPRRHQNQRQSEKSARGRLVESSM 135 ++ +I++ E Q+ + + SLK R++L+ +L + RR + + + KSAR + +E+ + Sbjct: 383 RQQQIQEKIE-QNRRAQEESLKHREQLIRNLEEVRELARREKEESEKLKSARKQELEAQV 441 Query: 134 A 132 A Sbjct: 442 A 442 >AK092736-1|BAC03960.1| 498|Homo sapiens protein ( Homo sapiens cDNA FLJ35417 fis, clone SMINT2000747. ). Length = 498 Score = 31.5 bits (68), Expect = 2.6 Identities = 17/61 (27%), Positives = 37/61 (60%) Frame = -3 Query: 314 KRSKIEQMFELQHLKTKFPSLKKRKELLSHLGNLMTNPRRHQNQRQSEKSARGRLVESSM 135 ++ +I++ E Q+ + + SLK R++L+ +L + RR + + + KSAR + +E+ + Sbjct: 383 RQQQIQEKIE-QNRRAQEESLKHREQLIRNLEEVRELARREKEESEKLKSARKQELEAQV 441 Query: 134 A 132 A Sbjct: 442 A 442 >U82467-1|AAB53699.1| 561|Homo sapiens tub homolog protein. Length = 561 Score = 30.3 bits (65), Expect = 6.0 Identities = 25/80 (31%), Positives = 38/80 (47%) Frame = -3 Query: 365 KRCWTTDGKIIVLLPDNKRSKIEQMFELQHLKTKFPSLKKRKELLSHLGNLMTNPRRHQN 186 ++ W +I +L D R+ +Q + Q + KKR+E L N P R + Sbjct: 57 RKYWKEGREIARVLDDEGRNLRQQKLDRQRALLEQKQKKKRQEPLMVQANADGRP-RSRR 115 Query: 185 QRQSEKSARGRLVESSMAVS 126 RQSE+ A LVES ++ S Sbjct: 116 ARQSEEQA--PLVESYLSSS 133 >BC075032-1|AAH75032.1| 561|Homo sapiens tubby homolog (mouse) protein. Length = 561 Score = 30.3 bits (65), Expect = 6.0 Identities = 25/80 (31%), Positives = 38/80 (47%) Frame = -3 Query: 365 KRCWTTDGKIIVLLPDNKRSKIEQMFELQHLKTKFPSLKKRKELLSHLGNLMTNPRRHQN 186 ++ W +I +L D R+ +Q + Q + KKR+E L N P R + Sbjct: 57 RKYWKEGREIARVLDDEGRNLRQQKLDRQRALLEQKQKKKRQEPLMVQANADGRP-RSRR 115 Query: 185 QRQSEKSARGRLVESSMAVS 126 RQSE+ A LVES ++ S Sbjct: 116 ARQSEEQA--PLVESYLSSS 133 >BC075031-1|AAH75031.1| 561|Homo sapiens tubby homolog (mouse) protein. Length = 561 Score = 30.3 bits (65), Expect = 6.0 Identities = 25/80 (31%), Positives = 38/80 (47%) Frame = -3 Query: 365 KRCWTTDGKIIVLLPDNKRSKIEQMFELQHLKTKFPSLKKRKELLSHLGNLMTNPRRHQN 186 ++ W +I +L D R+ +Q + Q + KKR+E L N P R + Sbjct: 57 RKYWKEGREIARVLDDEGRNLRQQKLDRQRALLEQKQKKKRQEPLMVQANADGRP-RSRR 115 Query: 185 QRQSEKSARGRLVESSMAVS 126 RQSE+ A LVES ++ S Sbjct: 116 ARQSEEQA--PLVESYLSSS 133 >AL132874-5|CAI42607.1| 451|Homo sapiens minichromosome maintenance complex component 9 protein. Length = 451 Score = 30.3 bits (65), Expect = 6.0 Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 4/60 (6%) Frame = -3 Query: 308 SKIEQMFELQHLKTKFPSLKKRKELLSHLGNLMTNPRRHQNQRQSE--KSARG--RLVES 141 SK E+++ ++ +KT F ++ + LS +GN + R +Q QRQS+ +AR RL+ES Sbjct: 356 SKSEKLWSMEKMKTYFCLIRNLQPTLSDVGNQVL-LRYYQMQRQSDCRNAARTTIRLLES 414 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 92,341,349 Number of Sequences: 237096 Number of extensions: 1968132 Number of successful extensions: 3675 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3477 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3675 length of database: 76,859,062 effective HSP length: 87 effective length of database: 56,231,710 effective search space used: 7028963750 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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