Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1047
(508 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 2.4
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 23 2.4
DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein ... 22 3.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 3.2
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 22 4.2
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 4.2
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 4.2
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 5.6
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 7.3
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 7.3
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 7.3
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 7.3
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 9.7
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 9.7
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 9.7
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 9.7
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 9.7
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 9.7
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 9.7
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 9.7
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.7
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 2.4
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 327 TRNTLYFNTIYSNY*NHQKYYS 392
+ T++ N Y+NY N + YY+
Sbjct: 308 SNKTIHNNNNYNNYNNKKLYYN 329
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 22.6 bits (46), Expect = 2.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 315 SYNSTRNTLYFNTIYSNY*NHQKYYSTWNFSST 413
+Y+S NTL + + SN + K+ + N SST
Sbjct: 300 AYSSLENTLKYYEVGSNVPFNFKFITDANSSST 332
>DQ855486-1|ABH88173.1| 104|Apis mellifera chemosensory protein 5
protein.
Length = 104
Score = 22.2 bits (45), Expect = 3.2
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -3
Query: 476 LVPVLLNNVINKCPAIMLAVNRT 408
L+P +LNN N+C + + + T
Sbjct: 56 LLPEVLNNHCNRCTSRQIGIANT 78
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.2 bits (45), Expect = 3.2
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +3
Query: 297 YKSHIYSYNSTRNTLYFNTIYSNY*NHQK--YYSTWN 401
+ ++ Y YN N N +NY N+ K YY+ N
Sbjct: 324 HNNNNYKYNYNNNNYNNNNYNNNYNNNCKKLYYNIIN 360
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 21.8 bits (44), Expect = 4.2
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -2
Query: 114 NVLNSLCNFFEMKFHIIKCRFGINQN 37
NV +C+ + ++F + ++GI QN
Sbjct: 48 NVPTFMCHKYGLRFEEVSEKYGILQN 73
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 4.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 288 N*KYKSHIYSYNSTRNTLYFNTIYSNY*NHQKYY 389
N KY S+ +YN+ N Y N +NY K Y
Sbjct: 88 NYKY-SNYNNYNNNYNNNYNNNYNNNYKKLYKNY 120
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 4.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 288 N*KYKSHIYSYNSTRNTLYFNTIYSNY*NHQKYY 389
N KY S+ +YN+ N Y N +NY K Y
Sbjct: 88 NYKY-SNYNNYNNNYNNNYNNNYNNNYKKLYKNY 120
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.4 bits (43), Expect = 5.6
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 315 SYNSTRNTLYFNTIYSNY 368
S+ T N YF+ Y NY
Sbjct: 209 SWRITHNFFYFDPRYGNY 226
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.0 bits (42), Expect = 7.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 288 N*KYKSHIYSYNSTRNTLYFNTIY 359
N KY + +YN+ LY+N Y
Sbjct: 95 NYKYNYNNNNYNNNCKKLYYNINY 118
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.0 bits (42), Expect = 7.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 288 N*KYKSHIYSYNSTRNTLYFNTIY 359
N KY + +YN+ LY+N Y
Sbjct: 95 NYKYNYNNNNYNNNCKKLYYNINY 118
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.0 bits (42), Expect = 7.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 288 N*KYKSHIYSYNSTRNTLYFNTIY 359
N KY + +YN+ LY+N Y
Sbjct: 95 NYKYNYNNNNYNNNCKKLYYNINY 118
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.0 bits (42), Expect = 7.3
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 288 N*KYKSHIYSYNSTRNTLYFNTIY 359
N KY + +YN+ LY+N Y
Sbjct: 95 NYKYNYNNNNYNNNCKKLYYNINY 118
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 333 NTLYFNTIYSNY*NHQKYYST 395
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 333 NTLYFNTIYSNY*NHQKYYST 395
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 333 NTLYFNTIYSNY*NHQKYYST 395
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 333 NTLYFNTIYSNY*NHQKYYST 395
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 333 NTLYFNTIYSNY*NHQKYYST 395
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 333 NTLYFNTIYSNY*NHQKYYST 395
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 9.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 333 NTLYFNTIYSNY*NHQKYYST 395
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 9.7
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 312 YSYNSTRNTLYFNTIY 359
Y+YN+ LY+N Y
Sbjct: 98 YNYNNNCKKLYYNINY 113
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 9.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -3
Query: 404 KVPGRIIFLMVSIIT 360
KV R+ LM+S+IT
Sbjct: 635 KVADRVSMLMISVIT 649
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,639
Number of Sequences: 438
Number of extensions: 1907
Number of successful extensions: 21
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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