BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1046X (496 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 4.1 DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein. 21 7.2 DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 7.2 DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 7.2 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 21.8 bits (44), Expect = 4.1 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = +3 Query: 150 MFRSIFILYFLPLINNS 200 MF+ +F L L L NNS Sbjct: 354 MFKDLFFLQILDLRNNS 370 >DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein. Length = 152 Score = 21.0 bits (42), Expect = 7.2 Identities = 8/16 (50%), Positives = 12/16 (75%) Frame = +3 Query: 330 IVVLMFM*SVVSYRMI 377 IV+L+F +VSY M+ Sbjct: 4 IVILLFTLCIVSYMMV 19 >DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 21.0 bits (42), Expect = 7.2 Identities = 10/45 (22%), Positives = 20/45 (44%) Frame = -3 Query: 377 YHSIRYNTSHKHQNNYLSST*NLLKMFILKYVXXXXXXLISTANF 243 Y++ N ++ + NNY ++ L K +I+ + NF Sbjct: 94 YNNYNNNYNNNYNNNYNNNYKKLYKNYIINIEQIPVPVPVYYGNF 138 >DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 21.0 bits (42), Expect = 7.2 Identities = 10/45 (22%), Positives = 20/45 (44%) Frame = -3 Query: 377 YHSIRYNTSHKHQNNYLSST*NLLKMFILKYVXXXXXXLISTANF 243 Y++ N ++ + NNY ++ L K +I+ + NF Sbjct: 94 YNNYNNNYNNNYNNNYNNNYKKLYKNYIINIEQIPVPVPVYYGNF 138 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 123,279 Number of Sequences: 438 Number of extensions: 2318 Number of successful extensions: 4 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4 length of database: 146,343 effective HSP length: 53 effective length of database: 123,129 effective search space used: 13667319 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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