Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1045X
         (431 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288           40   9e-04
09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974...    29   1.6  
12_01_1031 - 10605581-10606088,10606360-10606420,10606448-106064...    27   4.9  
07_01_0163 + 1149466-1150593,1150733-1150937,1151453-1151485,115...    27   4.9  
01_01_0474 - 3488739-3488876,3488996-3489118,3489878-3489991,349...    27   6.5  
05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751     27   8.6  

>07_01_0621 - 4606739-4606894,4606976-4607098,4608199-4608288
          Length = 122

 Score = 39.9 bits (89), Expect = 9e-04
 Identities = 17/39 (43%), Positives = 26/39 (66%)
 Frame = +1

Query: 76  ASEYNINSMPTYVFVKNG**LVDFSGANVDKLKTTILKH 192
           A +YN+ +MPT++F+K+G       GA  D L+ TI+KH
Sbjct: 74  AEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKH 112


>09_04_0038 -
           13996505-13996836,13997047-13997077,13997307-13997420,
           13997546-13997686,13997787-13997851,13997943-13998039,
           13998096-13998257,13998360-13998473,14001263-14001311,
           14001967-14002047,14003504-14003561,14003671-14004031,
           14004129-14004213,14004320-14004591,14004712-14004914,
           14005419-14005494
          Length = 746

 Score = 29.1 bits (62), Expect = 1.6
 Identities = 12/39 (30%), Positives = 25/39 (64%)
 Frame = +1

Query: 76  ASEYNINSMPTYVFVKNG**LVDFSGANVDKLKTTILKH 192
           A  +N++S+P++ FV+NG  +    GA+ + L+  + +H
Sbjct: 705 AYRWNVSSVPSFFFVRNGKEIDKVVGADKNGLERKVAQH 743


>12_01_1031 - 10605581-10606088,10606360-10606420,10606448-10606491,
            10606664-10608382,10609848-10610791
          Length = 1091

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +1

Query: 85   YNINSM-PTYVFVKNG**LVDFSGANVDKLKTTILKH 192
            Y+I  + PT+ FVK+G  +    GAN + L+  I +H
Sbjct: 1047 YDIEGIVPTFFFVKDGEKIDKIPGANKELLRAKIRRH 1083


>07_01_0163 +
           1149466-1150593,1150733-1150937,1151453-1151485,
           1152244-1153646
          Length = 922

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 392 RELRDYNRTNIFCIPEAANTKNEYLEIH 309
           +EL  +++   +C P  A+T  EY  IH
Sbjct: 721 QELAQFHQRGFYCFPFVASTDPEYSRIH 748


>01_01_0474 -
           3488739-3488876,3488996-3489118,3489878-3489991,
           3490416-3490452,3490584-3490675,3490878-3490956,
           3491640-3491734,3491858-3491991,3492560-3492833,
           3493743-3494015,3494976-3495512
          Length = 631

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +1

Query: 76  ASEYNINSMPTYVFVKNG**LVDFSGANVDKLKTTI 183
           +S ++I + PT+ F+KNG  +    GAN  +L+  +
Sbjct: 589 SSSWDIRATPTFFFLKNGEQVDKLVGANKPELEKKV 624


>05_06_0017 + 24964168-24964275,24965384-24965506,24965617-24965751
          Length = 121

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +1

Query: 76  ASEYNINSMPTYVFVKNG**LVDFSGANVDKLKTTILKH 192
           A ++++ +MPT++F+K G       GA  D+L + +  H
Sbjct: 80  AEQFSVEAMPTFLFMKEGDVKDRVVGAMKDELASKLELH 118


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,133,474
Number of Sequences: 37544
Number of extensions: 140290
Number of successful extensions: 366
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 365
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 814473264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)