BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1045X
(431 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X77584-1|CAA54687.1| 105|Homo sapiens ATL-derived factor/thiore... 38 0.015
X54539-1|CAA38410.1| 105|Homo sapiens thioredoxin protein. 38 0.015
CR407665-1|CAG28593.1| 105|Homo sapiens TXN protein. 38 0.015
BC054866-1|AAH54866.1| 105|Homo sapiens thioredoxin protein. 38 0.015
BC003377-1|AAH03377.1| 105|Homo sapiens thioredoxin protein. 38 0.015
AY004872-1|AAF87085.1| 105|Homo sapiens thioredoxin protein. 38 0.015
AL158158-2|CAI14067.1| 85|Homo sapiens thioredoxin protein. 38 0.015
AL158158-1|CAI14066.1| 105|Homo sapiens thioredoxin protein. 38 0.015
AF548001-1|AAN33187.1| 105|Homo sapiens thioredoxin protein. 38 0.015
AF313911-1|AAG34699.1| 105|Homo sapiens thioredoxin protein. 38 0.015
AF065241-1|AAC17430.1| 84|Homo sapiens thioredoxin delta 3 pro... 38 0.015
J04026-1|AAA74596.1| 105|Homo sapiens thioredoxin protein. 36 0.078
AF276919-1|AAF86466.1| 105|Homo sapiens thioredoxin 1 protein. 36 0.078
>X77584-1|CAA54687.1| 105|Homo sapiens ATL-derived
factor/thioredoxin protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.015
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 76 ASEYNINSMPTYVFVKNG**LVDFSGANVDKLKTTI 183
ASE + MPT+ F K G + +FSGAN +KL+ TI
Sbjct: 66 ASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATI 101
>X54539-1|CAA38410.1| 105|Homo sapiens thioredoxin protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.015
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 76 ASEYNINSMPTYVFVKNG**LVDFSGANVDKLKTTI 183
ASE + MPT+ F K G + +FSGAN +KL+ TI
Sbjct: 66 ASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATI 101
>CR407665-1|CAG28593.1| 105|Homo sapiens TXN protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.015
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 76 ASEYNINSMPTYVFVKNG**LVDFSGANVDKLKTTI 183
ASE + MPT+ F K G + +FSGAN +KL+ TI
Sbjct: 66 ASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATI 101
>BC054866-1|AAH54866.1| 105|Homo sapiens thioredoxin protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.015
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 76 ASEYNINSMPTYVFVKNG**LVDFSGANVDKLKTTI 183
ASE + MPT+ F K G + +FSGAN +KL+ TI
Sbjct: 66 ASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATI 101
>BC003377-1|AAH03377.1| 105|Homo sapiens thioredoxin protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.015
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 76 ASEYNINSMPTYVFVKNG**LVDFSGANVDKLKTTI 183
ASE + MPT+ F K G + +FSGAN +KL+ TI
Sbjct: 66 ASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATI 101
>AY004872-1|AAF87085.1| 105|Homo sapiens thioredoxin protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.015
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 76 ASEYNINSMPTYVFVKNG**LVDFSGANVDKLKTTI 183
ASE + MPT+ F K G + +FSGAN +KL+ TI
Sbjct: 66 ASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATI 101
>AL158158-2|CAI14067.1| 85|Homo sapiens thioredoxin protein.
Length = 85
Score = 37.9 bits (84), Expect = 0.015
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 76 ASEYNINSMPTYVFVKNG**LVDFSGANVDKLKTTI 183
ASE + MPT+ F K G + +FSGAN +KL+ TI
Sbjct: 46 ASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATI 81
>AL158158-1|CAI14066.1| 105|Homo sapiens thioredoxin protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.015
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 76 ASEYNINSMPTYVFVKNG**LVDFSGANVDKLKTTI 183
ASE + MPT+ F K G + +FSGAN +KL+ TI
Sbjct: 66 ASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATI 101
>AF548001-1|AAN33187.1| 105|Homo sapiens thioredoxin protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.015
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 76 ASEYNINSMPTYVFVKNG**LVDFSGANVDKLKTTI 183
ASE + MPT+ F K G + +FSGAN +KL+ TI
Sbjct: 66 ASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATI 101
>AF313911-1|AAG34699.1| 105|Homo sapiens thioredoxin protein.
Length = 105
Score = 37.9 bits (84), Expect = 0.015
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 76 ASEYNINSMPTYVFVKNG**LVDFSGANVDKLKTTI 183
ASE + MPT+ F K G + +FSGAN +KL+ TI
Sbjct: 66 ASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATI 101
>AF065241-1|AAC17430.1| 84|Homo sapiens thioredoxin delta 3
protein.
Length = 84
Score = 37.9 bits (84), Expect = 0.015
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 76 ASEYNINSMPTYVFVKNG**LVDFSGANVDKLKTTI 183
ASE + MPT+ F K G + +FSGAN +KL+ TI
Sbjct: 45 ASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATI 80
>J04026-1|AAA74596.1| 105|Homo sapiens thioredoxin protein.
Length = 105
Score = 35.5 bits (78), Expect = 0.078
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +1
Query: 76 ASEYNINSMPTYVFVKNG**LVDFSGANVDKLKTTI 183
ASE + PT+ F K G + +FSGAN +KL+ TI
Sbjct: 66 ASECEVKCTPTFQFFKKGQKVGEFSGANKEKLEATI 101
>AF276919-1|AAF86466.1| 105|Homo sapiens thioredoxin 1 protein.
Length = 105
Score = 35.5 bits (78), Expect = 0.078
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +1
Query: 76 ASEYNINSMPTYVFVKNG**LVDFSGANVDKLKTTI 183
ASE + PT+ F K G + +FSGAN +KL+ TI
Sbjct: 66 ASECEVKCTPTFQFFKKGQKVGEFSGANKEKLEATI 101
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,458,087
Number of Sequences: 237096
Number of extensions: 798047
Number of successful extensions: 1178
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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