Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1045
(644 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g24510.1 68417.m03514 eceriferum protein (CER2) identical to ... 33 0.16
At4g34140.1 68417.m04845 D111/G-patch domain-containing protein ... 31 0.50
At2g40620.1 68415.m05010 bZIP transcription factor family protei... 30 1.1
At1g19680.1 68414.m02453 expressed protein 30 1.1
At5g04770.1 68418.m00492 amino acid permease family protein simi... 29 2.6
At3g58050.1 68416.m06471 expressed protein 29 2.6
At3g10600.1 68416.m01275 amino acid permease family protein simi... 29 2.6
At2g43600.1 68415.m05419 glycoside hydrolase family 19 protein s... 29 2.6
At5g52975.1 68418.m06577 expressed protein 29 3.5
At4g21120.1 68417.m03054 amino acid permease family protein simi... 28 4.6
At2g34960.1 68415.m04290 amino acid permease family protein simi... 28 4.6
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 28 4.6
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 28 4.6
At5g07870.1 68418.m00906 transferase family protein similar to a... 28 6.1
At2g35050.1 68415.m04300 protein kinase family protein contains ... 28 6.1
At1g70520.1 68414.m08116 protein kinase family protein contains ... 27 8.1
>At4g24510.1 68417.m03514 eceriferum protein (CER2) identical to
(CER2) [Arabidopsis thaliana] GI:1213594; contains Pfam
profile PF02458: Transferase family
Length = 421
Score = 33.1 bits (72), Expect = 0.16
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = -1
Query: 533 LGPLFLTFARLSGLTIGVLACWGICSGPVVDVATGGLATSTGFPFSLTNSVTVHSPLSCL 354
LGP LTF+ L L I C G+C G G + +++ F +L V+ H+P +
Sbjct: 136 LGP-DLTFSPLVFLQITQFKCGGLCIGLSWAHILGDVFSASTFMKTLGQLVSGHAPTKPV 194
Query: 353 YPR-PSLITYVQ 321
YP+ P L ++ +
Sbjct: 195 YPKTPELTSHAR 206
>At4g34140.1 68417.m04845 D111/G-patch domain-containing protein
contains Pfam PF01585: G-patch domain
Length = 418
Score = 31.5 bits (68), Expect = 0.50
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 322 WTYVIKDGLGYRQDNGEWTVTEFVNENGNP 411
W Y KDG Y+ +NGE+ E+ + NP
Sbjct: 48 WYYCSKDGRYYKHENGEYVPLEYDESSVNP 77
>At2g40620.1 68415.m05010 bZIP transcription factor family protein
identical to b-Zip DNA binding protein GI:2246376 from
[Arabidopsis thaliana]; contains a bZIP transcription
factor basic domain signature (PDOC00036)
Length = 367
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 405 ESSRRSQPTCGHIYHGSTADTPTSQHSY 488
+SSR + PT + H +T++ P HSY
Sbjct: 301 QSSRTNPPTAHQLMHHATSNAPAQSHSY 328
>At1g19680.1 68414.m02453 expressed protein
Length = 444
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +3
Query: 432 CGHIYHGSTADTPTSQ-HSYR*TGQTCKRQK--QWSKAAIKSVRELLSSVTSLKR 587
CGH+YH + +T T++ Y T C + + S+ A+K+ EL TS KR
Sbjct: 299 CGHVYHAACLETMTNETEKYDPTCPICTETQVTKLSRKALKAEAEL--KATSYKR 351
>At5g04770.1 68418.m00492 amino acid permease family protein similar
to cationic amino acid transporter-1 [Rattus norvegicus]
GI:1589917; contains Pfam profile PF00324: Amino acid
permease
Length = 583
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 396 IDEFCYSPFAVILPISEAILDYIR 325
+ FCY+ FAV LP++ YIR
Sbjct: 108 LSAFCYTEFAVHLPVAGGAFSYIR 131
>At3g58050.1 68416.m06471 expressed protein
Length = 1209
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 92 AQYIVPPAKLEAIYPAGLRVTVPDDGFSLFAFHG 193
AQ + PP +L + P + TV +D FSLF F G
Sbjct: 1123 AQNLEPPLELNCLAPPETQ-TVNEDSFSLFHFSG 1155
>At3g10600.1 68416.m01275 amino acid permease family protein similar
to SP|Q09143 High-affinity cationic amino acid
transporter-1 (CAT-1) {Mus musculus}; contains Pfam
profile PF00324: Amino acid permease
Length = 584
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 396 IDEFCYSPFAVILPISEAILDYIR 325
+ FCY+ FAV LP++ YIR
Sbjct: 107 LSAFCYTEFAVHLPVAGGAFSYIR 130
>At2g43600.1 68415.m05419 glycoside hydrolase family 19 protein
similar to basic endochitinase CHB4 precursor SP:Q06209
from [Brassica napus]
Length = 273
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 173 SLFAFHGKLNEEMEGLESGHWSRDITKAK 259
+L+ G++ + ++G E G+W RD TK K
Sbjct: 224 ALYLGFGEITKRVDGRECGNWRRDDTKNK 252
>At5g52975.1 68418.m06577 expressed protein
Length = 121
Score = 28.7 bits (61), Expect = 3.5
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +2
Query: 41 IIILSVLVTICSAQPRAAQYIVPPAKLEAIYPAGLRVTVPDDGFSLFAFHGKLNEEMEGL 220
I+I+S+ V I Q A PP + I+P GL + + SLF G + E + +
Sbjct: 10 ILIVSLCVAIFVTQG-VAHMQTPPTTVPGIFPPGLPIDLVKCWSSLFNVEGCVLEIAKSI 68
Query: 221 ESG 229
SG
Sbjct: 69 FSG 71
>At4g21120.1 68417.m03054 amino acid permease family protein similar
to cationic amino acid transporter-1 [Rattus norvegicus]
GI:1589917; contains Pfam profile PF00324: Amino acid
permease
Length = 594
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -3
Query: 408 IPIFIDEFCYSPFAVILPISEAILDYIRPEI 316
+ + FCY+ FAV +P++ Y+R E+
Sbjct: 117 VSAMLSVFCYTEFAVEIPVAGGSFAYLRVEL 147
>At2g34960.1 68415.m04290 amino acid permease family protein similar
to cationic amino acid transporter 3 [Rattus norvegicus]
GI:2116552; contains Pfam profile PF00324: Amino acid
permease
Length = 569
Score = 28.3 bits (60), Expect = 4.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 387 FCYSPFAVILPISEAILDYIRPEINLISQF 298
FCY+ FAV +P++ Y+R E+ + F
Sbjct: 118 FCYTEFAVEIPVAGGSFAYLRIELGDFAAF 147
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 409 PVDVANPPVATSTTGPLQIPQQASTPIVRPDRRANVRNSGP 531
P VA PP A + P Q+P A P +PD + +S P
Sbjct: 105 PPPVATPPPAPLASPPAQVP--APAPTTKPDSPSPSPSSSP 143
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 409 PVDVANPPVATSTTGPLQIPQQASTPIVRPDRRANVRNSGP 531
P VA PP A + P Q+P A P +PD + +S P
Sbjct: 105 PPPVATPPPAPLASPPAQVP--APAPTTKPDSPSPSPSSSP 143
>At5g07870.1 68418.m00906 transferase family protein similar to
anthranilate N-hydroxycinnamoyl/benzoyltransferase,
Dianthus caryophyllus [gi:2239091]; contains Pfam
transferase family domain PF002458
Length = 464
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 301 LGDKIYFWTYVIKDGLGYRQDNGEWTVTEFVNENGNPV-DVANPPVATSTTGPL 459
LGD FW + + L ++ E T+ N N N + + NPP+ TGP+
Sbjct: 178 LGDGSSFWQFF--NSLSEIFNSQEETIGNNNNNNNNALLCLKNPPIIREATGPM 229
>At2g35050.1 68415.m04300 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 1257
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 382 TEFVNENGNPVDVANPPVATSTTGPLQI-PQQASTPIVRPD 501
T N NG P+D + PP+ + QI PQ ++PD
Sbjct: 874 TSMTNTNGVPIDYSYPPLQSEKVASSQIHPQIHFDGNIKPD 914
>At1g70520.1 68414.m08116 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 649
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -3
Query: 546 ILSRPWTTVS-DVCTSVRSNDRSAGLLGYLQWTRGRCGH 433
+L+ W T+S D C N ++ + G L W+ GR H
Sbjct: 195 VLANCWRTLSPDSCKQCLENASASVVKGCLPWSEGRALH 233
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,186,174
Number of Sequences: 28952
Number of extensions: 302128
Number of successful extensions: 1063
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1334473344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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