Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1044X
(500 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 1.8
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 1.8
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 1.8
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 1.8
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 1.8
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 1.8
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 1.8
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 3.1
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 3.1
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 5.5
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 5.5
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 21 5.5
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 9.5
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 1.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 484 ILEGKNETFVCKKYILK*NFYR 419
I + +NET CKKY + N R
Sbjct: 197 IEKSENETKTCKKYAISSNSLR 218
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 1.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 484 ILEGKNETFVCKKYILK*NFYR 419
I + +NET CKKY + N R
Sbjct: 197 IEKSENETKTCKKYAISSNSLR 218
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 1.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 484 ILEGKNETFVCKKYILK*NFYR 419
I + +NET CKKY + N R
Sbjct: 197 IEKSENETKTCKKYAISSNSLR 218
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 1.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 484 ILEGKNETFVCKKYILK*NFYR 419
I + +NET CKKY + N R
Sbjct: 197 IEKSENETKTCKKYAISSNSLR 218
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.0 bits (47), Expect = 1.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 484 ILEGKNETFVCKKYILK*NFYR 419
I + +NET CKKY + N R
Sbjct: 197 IEKSENETKTCKKYAISSNSLR 218
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 23.0 bits (47), Expect = 1.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 484 ILEGKNETFVCKKYILK*NFYR 419
I + +NET CKKY + N R
Sbjct: 197 IEKSENETKTCKKYAISSNSLR 218
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.0 bits (47), Expect = 1.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 484 ILEGKNETFVCKKYILK*NFYR 419
I + +NET CKKY + N R
Sbjct: 197 IEKSENETKTCKKYAISSNSLR 218
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.1
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 484 ILEGKNETFVCKKYILK*N 428
I + +NET CKKY + N
Sbjct: 197 IEKSENETKTCKKYAISSN 215
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 22.2 bits (45), Expect = 3.1
Identities = 11/43 (25%), Positives = 19/43 (44%)
Frame = -3
Query: 366 YIFFFPNYHVGYNMKDAEKKRFRFFFVLRHGVISTYTKYFGVI 238
Y F P+ H D K + +FF R + + ++ GV+
Sbjct: 454 YFFICPSIHFAQLFADRGMKVYYYFFTQRTST-NLWGEWMGVL 495
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 5.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 372 NIYIFFFPNYHVGYNMK 322
N+YI FPN V Y+++
Sbjct: 137 NVYIRIFPNGSVLYSIR 153
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.4 bits (43), Expect = 5.5
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 372 NIYIFFFPNYHVGYNMK 322
N+YI FPN V Y+++
Sbjct: 137 NVYIRIFPNGSVLYSIR 153
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = -3
Query: 366 YIFFFPNYHVGYNMKDAEKKRFRFFFVLR 280
Y F P+ H D K + +FF R
Sbjct: 454 YFFICPSIHFAQLFADRGMKVYYYFFTQR 482
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 20.6 bits (41), Expect = 9.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 237 LLPQNILCKLILPHGEEQKKNEIAS 311
+LP CK+IL E ++ IAS
Sbjct: 463 ILPPRKRCKMILESMEIERNGLIAS 487
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,525
Number of Sequences: 438
Number of extensions: 3037
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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