BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1044X (500 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 1.8 AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 1.8 AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 1.8 AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 1.8 AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 1.8 AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 23 1.8 AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 1.8 AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 3.1 AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 3.1 DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 5.5 DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 5.5 AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 21 5.5 AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 9.5 >AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 23.0 bits (47), Expect = 1.8 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -2 Query: 484 ILEGKNETFVCKKYILK*NFYR 419 I + +NET CKKY + N R Sbjct: 197 IEKSENETKTCKKYAISSNSLR 218 >AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 23.0 bits (47), Expect = 1.8 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -2 Query: 484 ILEGKNETFVCKKYILK*NFYR 419 I + +NET CKKY + N R Sbjct: 197 IEKSENETKTCKKYAISSNSLR 218 >AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 23.0 bits (47), Expect = 1.8 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -2 Query: 484 ILEGKNETFVCKKYILK*NFYR 419 I + +NET CKKY + N R Sbjct: 197 IEKSENETKTCKKYAISSNSLR 218 >AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 23.0 bits (47), Expect = 1.8 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -2 Query: 484 ILEGKNETFVCKKYILK*NFYR 419 I + +NET CKKY + N R Sbjct: 197 IEKSENETKTCKKYAISSNSLR 218 >AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 23.0 bits (47), Expect = 1.8 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -2 Query: 484 ILEGKNETFVCKKYILK*NFYR 419 I + +NET CKKY + N R Sbjct: 197 IEKSENETKTCKKYAISSNSLR 218 >AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. Length = 400 Score = 23.0 bits (47), Expect = 1.8 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -2 Query: 484 ILEGKNETFVCKKYILK*NFYR 419 I + +NET CKKY + N R Sbjct: 197 IEKSENETKTCKKYAISSNSLR 218 >AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex determiner protein. Length = 401 Score = 23.0 bits (47), Expect = 1.8 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -2 Query: 484 ILEGKNETFVCKKYILK*NFYR 419 I + +NET CKKY + N R Sbjct: 197 IEKSENETKTCKKYAISSNSLR 218 >AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 22.2 bits (45), Expect = 3.1 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = -2 Query: 484 ILEGKNETFVCKKYILK*N 428 I + +NET CKKY + N Sbjct: 197 IEKSENETKTCKKYAISSN 215 >AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase protein. Length = 628 Score = 22.2 bits (45), Expect = 3.1 Identities = 11/43 (25%), Positives = 19/43 (44%) Frame = -3 Query: 366 YIFFFPNYHVGYNMKDAEKKRFRFFFVLRHGVISTYTKYFGVI 238 Y F P+ H D K + +FF R + + ++ GV+ Sbjct: 454 YFFICPSIHFAQLFADRGMKVYYYFFTQRTST-NLWGEWMGVL 495 >DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride channel protein. Length = 447 Score = 21.4 bits (43), Expect = 5.5 Identities = 8/17 (47%), Positives = 12/17 (70%) Frame = -3 Query: 372 NIYIFFFPNYHVGYNMK 322 N+YI FPN V Y+++ Sbjct: 137 NVYIRIFPNGSVLYSIR 153 >DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride channel protein. Length = 447 Score = 21.4 bits (43), Expect = 5.5 Identities = 8/17 (47%), Positives = 12/17 (70%) Frame = -3 Query: 372 NIYIFFFPNYHVGYNMK 322 N+YI FPN V Y+++ Sbjct: 137 NVYIRIFPNGSVLYSIR 153 >AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase protein. Length = 492 Score = 21.4 bits (43), Expect = 5.5 Identities = 9/29 (31%), Positives = 12/29 (41%) Frame = -3 Query: 366 YIFFFPNYHVGYNMKDAEKKRFRFFFVLR 280 Y F P+ H D K + +FF R Sbjct: 454 YFFICPSIHFAQLFADRGMKVYYYFFTQR 482 >AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1 protein. Length = 500 Score = 20.6 bits (41), Expect = 9.5 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +3 Query: 237 LLPQNILCKLILPHGEEQKKNEIAS 311 +LP CK+IL E ++ IAS Sbjct: 463 ILPPRKRCKMILESMEIERNGLIAS 487 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 144,525 Number of Sequences: 438 Number of extensions: 3037 Number of successful extensions: 13 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 13741392 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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