Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1041
         (286 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006206-1|AAH06206.3|  912|Homo sapiens NIBP protein protein.         27   8.3  
AY190606-1|AAO38740.1|  944|Homo sapiens T1 protein.                   27   8.3  
AK128755-1|BAC87600.1| 1246|Homo sapiens protein ( Homo sapiens ...    27   8.3  
AK027689-1|BAB55299.1|  545|Homo sapiens protein ( Homo sapiens ...    27   8.3  
AB067469-1|BAB67775.1| 1176|Homo sapiens KIAA1882 protein protein.     27   8.3  

>BC006206-1|AAH06206.3|  912|Homo sapiens NIBP protein protein.
          Length = 912

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 280 SMSLPRPAHQSQTGNDESIHLHI*CDLFSGE 188
           S SLPR AH  Q  + + I  ++   L++GE
Sbjct: 464 STSLPRSAHSLQPSSGDEISTNVSVQLYNGE 494


>AY190606-1|AAO38740.1|  944|Homo sapiens T1 protein.
          Length = 944

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 280 SMSLPRPAHQSQTGNDESIHLHI*CDLFSGE 188
           S SLPR AH  Q  + + I  ++   L++GE
Sbjct: 496 STSLPRSAHSLQPSSGDEISTNVSVQLYNGE 526


>AK128755-1|BAC87600.1| 1246|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44832 fis, clone BRACE3047801. ).
          Length = 1246

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 280 SMSLPRPAHQSQTGNDESIHLHI*CDLFSGE 188
           S SLPR AH  Q  + + I  ++   L++GE
Sbjct: 798 STSLPRSAHSLQPSSGDEISTNVSVQLYNGE 828


>AK027689-1|BAB55299.1|  545|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14783 fis, clone NT2RP4000541. ).
          Length = 545

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 280 SMSLPRPAHQSQTGNDESIHLHI*CDLFSGE 188
           S SLPR AH  Q  + + I  ++   L++GE
Sbjct: 97  STSLPRSAHSLQPSSGDEISTNVSVQLYNGE 127


>AB067469-1|BAB67775.1| 1176|Homo sapiens KIAA1882 protein protein.
          Length = 1176

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 280 SMSLPRPAHQSQTGNDESIHLHI*CDLFSGE 188
           S SLPR AH  Q  + + I  ++   L++GE
Sbjct: 728 STSLPRSAHSLQPSSGDEISTNVSVQLYNGE 758


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,516,000
Number of Sequences: 237096
Number of extensions: 667606
Number of successful extensions: 1050
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 76,859,062
effective HSP length: 71
effective length of database: 60,025,246
effective search space used: 1380580658
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)