Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1040X
(405 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a ... 106 2e-23
BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a ... 106 2e-23
BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a ... 106 2e-23
BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a ... 106 2e-23
BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a ... 106 2e-23
AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein. 106 2e-23
AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein. 106 2e-23
X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a pr... 105 6e-23
X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homolog... 87 3e-17
BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for MG... 38 0.017
>BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 106 bits (255), Expect = 2e-23
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = +2
Query: 254 RPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNQCGVISP 403
RPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLN+CGVISP
Sbjct: 28 RPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISP 77
Score = 56.4 bits (130), Expect = 3e-08
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +3
Query: 174 MVRMNVLSDALKSIHNAEKRGKRQVLIGPVPKSSLSF 284
MVRMNVL+DALKSI+NAEKRGKRQVLI P K + F
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRF 37
>BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 106 bits (255), Expect = 2e-23
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = +2
Query: 254 RPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNQCGVISP 403
RPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLN+CGVISP
Sbjct: 28 RPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISP 77
Score = 56.4 bits (130), Expect = 3e-08
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +3
Query: 174 MVRMNVLSDALKSIHNAEKRGKRQVLIGPVPKSSLSF 284
MVRMNVL+DALKSI+NAEKRGKRQVLI P K + F
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRF 37
>BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 106 bits (255), Expect = 2e-23
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = +2
Query: 254 RPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNQCGVISP 403
RPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLN+CGVISP
Sbjct: 28 RPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISP 77
Score = 56.4 bits (130), Expect = 3e-08
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +3
Query: 174 MVRMNVLSDALKSIHNAEKRGKRQVLIGPVPKSSLSF 284
MVRMNVL+DALKSI+NAEKRGKRQVLI P K + F
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRF 37
>BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 106 bits (255), Expect = 2e-23
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = +2
Query: 254 RPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNQCGVISP 403
RPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLN+CGVISP
Sbjct: 28 RPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISP 77
Score = 56.4 bits (130), Expect = 3e-08
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +3
Query: 174 MVRMNVLSDALKSIHNAEKRGKRQVLIGPVPKSSLSF 284
MVRMNVL+DALKSI+NAEKRGKRQVLI P K + F
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRF 37
>BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 106 bits (255), Expect = 2e-23
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = +2
Query: 254 RPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNQCGVISP 403
RPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLN+CGVISP
Sbjct: 28 RPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISP 77
Score = 56.4 bits (130), Expect = 3e-08
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +3
Query: 174 MVRMNVLSDALKSIHNAEKRGKRQVLIGPVPKSSLSF 284
MVRMNVL+DALKSI+NAEKRGKRQVLI P K + F
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRF 37
>AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein.
Length = 130
Score = 106 bits (255), Expect = 2e-23
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = +2
Query: 254 RPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNQCGVISP 403
RPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLN+CGVISP
Sbjct: 28 RPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISP 77
Score = 56.4 bits (130), Expect = 3e-08
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +3
Query: 174 MVRMNVLSDALKSIHNAEKRGKRQVLIGPVPKSSLSF 284
MVRMNVL+DALKSI+NAEKRGKRQVLI P K + F
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRF 37
>AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein.
Length = 130
Score = 106 bits (255), Expect = 2e-23
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = +2
Query: 254 RPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNQCGVISP 403
RPCSKVIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLN+CGVISP
Sbjct: 28 RPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISP 77
Score = 56.4 bits (130), Expect = 3e-08
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +3
Query: 174 MVRMNVLSDALKSIHNAEKRGKRQVLIGPVPKSSLSF 284
MVRMNVL+DALKSI+NAEKRGKRQVLI P K + F
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRF 37
>X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 105 bits (252), Expect = 6e-23
Identities = 46/50 (92%), Positives = 50/50 (100%)
Frame = +2
Query: 254 RPCSKVIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNQCGVISP 403
RPCSKVIV+FLT+MMKHGYIGEFEI+DDHRAGKIVVNLTGRLN+CGVISP
Sbjct: 28 RPCSKVIVRFLTLMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISP 77
Score = 56.4 bits (130), Expect = 3e-08
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +3
Query: 174 MVRMNVLSDALKSIHNAEKRGKRQVLIGPVPKSSLSF 284
MVRMNVL+DALKSI+NAEKRGKRQVLI P K + F
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRF 37
>X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homologous
to yeast S24 protein.
Length = 129
Score = 86.6 bits (205), Expect = 3e-17
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = +2
Query: 284 LTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNQCGVISP 403
LTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLN+CGVISP
Sbjct: 37 LTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISP 76
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +3
Query: 174 MVRMNVLSDALKSIHNAEKRGKRQVLIG 257
MVRMNVL+DALKSI+NAEKRGKR+ L+G
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRRCLLG 28
>BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for
MGC:88417) protein.
Length = 37
Score = 37.5 bits (83), Expect = 0.017
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = +3
Query: 174 MVRMNVLSDALKSIHNAEKRGKRQVL 251
MV MNVL+ ALKSI+N + RGK QVL
Sbjct: 1 MVHMNVLTIALKSINNVKTRGKHQVL 26
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,475,927
Number of Sequences: 237096
Number of extensions: 772992
Number of successful extensions: 1147
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2985693880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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