Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1039X
(489 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36370.1 68415.m04463 F-box family protein (FBL11) contains s... 33 0.078
At4g21400.1 68417.m03091 protein kinase family protein contains ... 30 0.96
At5g60270.1 68418.m07554 lectin protein kinase family protein co... 29 1.3
At3g45440.1 68416.m04905 lectin protein kinase family protein co... 29 2.2
At3g45410.1 68416.m04902 lectin protein kinase family protein co... 29 2.2
At1g28270.1 68414.m03470 rapid alkalinization factor (RALF) fami... 28 3.9
At1g68670.1 68414.m07846 myb family transcription factor contain... 27 5.1
At2g33775.1 68415.m04142 rapid alkalinization factor (RALF) fami... 27 6.8
At1g13300.1 68414.m01544 myb family transcription factor contain... 27 6.8
At5g04920.1 68418.m00519 vacuolar protein sorting 36 family prot... 27 9.0
At4g37480.1 68417.m05304 DNAJ heat shock N-terminal domain-conta... 27 9.0
At4g37330.1 68417.m05287 cytochrome P450 family protein 27 9.0
At2g17930.1 68415.m02076 FAT domain-containing protein / phospha... 27 9.0
>At2g36370.1 68415.m04463 F-box family protein (FBL11) contains
similarity to leucine-rich repeats containing F-box
protein FBL3 GI:5919219 from [Homo sapiens]
Length = 785
Score = 33.5 bits (73), Expect = 0.078
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 214 VCSHRC-LSGSGCAGEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNHVVA 363
VC C L+ GCA D+C +V Q C++ SL C Y F +N ++A
Sbjct: 441 VCESLCYLNIKGCALLSDACIASVIQRCKKLCSLIVC---YTSFSENSILA 488
>At4g21400.1 68417.m03091 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 711
Score = 29.9 bits (64), Expect = 0.96
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +3
Query: 237 WLWVCWRGRLMLSERRPRMQTDFKSAALQRV---LRPIQGQPRCSERTEGISL 386
W+W CWR ++LS P + T +S L+ + L +Q P + ++L
Sbjct: 609 WVWRCWREDIILSVIDPSLTTGSRSEILRCIHIGLLCVQESPASRPTMDSVAL 661
>At5g60270.1 68418.m07554 lectin protein kinase family protein
contains Pfam domains, PF00069: Protein kinase domain,
PF00139: Legume lectins beta domain, and PF00138: Legume
lectins alpha domain
Length = 668
Score = 29.5 bits (63), Expect = 1.3
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 237 WLWVCWRGRLMLSERRPRMQTDFKSAALQRVLR 335
W+ CW+ ++ R PR+ T+F S +++VL+
Sbjct: 557 WVSECWKRSSLIDARDPRL-TEFSSQEVEKVLK 588
>At3g45440.1 68416.m04905 lectin protein kinase family protein
contains Legume lectins beta-chain signature,
PROSITE:PS00307 and PS00108: Serine/Threonine protein
kinases active-site signature, PROSITE:PS00108
Length = 669
Score = 28.7 bits (61), Expect = 2.2
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 237 WLWVCWRGRLMLSERRPRMQTDFKSAALQRVLR 335
W+ CW+ +L R PRM+ + + ++ VL+
Sbjct: 555 WVCECWKMASLLGARDPRMRGEISAEEVEMVLK 587
>At3g45410.1 68416.m04902 lectin protein kinase family protein
contains Pfam profiles: PF00069 protein kinase domain,
PF00138 legume lectins alpha domain, PF00139 legume
lectins beta domain
Length = 664
Score = 28.7 bits (61), Expect = 2.2
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +3
Query: 237 WLWVCWRGRLMLSERRPRMQTDFKSAALQRVLR 335
W++ CW+ + R PR+ +F ++ VL+
Sbjct: 555 WVYECWKEACLFKTRDPRLGVEFLPEEVEMVLK 587
>At1g28270.1 68414.m03470 rapid alkalinization factor (RALF) family
protein similar to RALF precursor [Nicotiana tabacum]
GI:16566316
Length = 110
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 229 CLSGSGCAGEEDSCYQNVD-QGCRRTLSLPHCSAYYGQFKDNHV 357
C++G GC GE+D +D + RR L+ Y K N+V
Sbjct: 31 CINGQGCIGEDDELESLMDSETNRRQLARGRRYIGYDALKKNNV 74
>At1g68670.1 68414.m07846 myb family transcription factor contains
Pfam domain, PF00249: Myb-like DNA-binding domain
Length = 354
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/35 (31%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 354 RCSERTEGI-SLTVFETFLPLSPVGLLLQQLPDEQ 455
+CSE+T + VFE F+P+ + L +++ +E+
Sbjct: 63 QCSEQTTSVCGGPVFEEFIPIKKISSLCEEVQEEE 97
>At2g33775.1 68415.m04142 rapid alkalinization factor (RALF) family
protein similar to RALF precursor [Nicotiana tabacum]
GI:16566316
Length = 110
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 229 CLSGSGCAGEEDSC-YQNVDQGCRRTLSLPHCSAYYGQFKDNHV 357
C++G GC GE+ Y + RR L+ YG + N+V
Sbjct: 31 CVNGQGCIGEDGELDYLMDSETNRRQLAARRSYISYGALRKNNV 74
>At1g13300.1 68414.m01544 myb family transcription factor contains
Pfam domain, PF00249: Myb-like DNA-binding domain
Length = 344
Score = 27.1 bits (57), Expect = 6.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 345 GQPRCSERTEGISLTVFETFLPL 413
GQP CSE+T G V E FL +
Sbjct: 66 GQPECSEQTTGECGPVLEQFLTI 88
>At5g04920.1 68418.m00519 vacuolar protein sorting 36 family protein
/ VPS36 family protein contains Pfam PF04132: Vacuolar
protein sorting 36
Length = 440
Score = 26.6 bits (56), Expect = 9.0
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +3
Query: 240 LWVCWRGRLMLSERRPRMQT 299
LW CWRGR E + +T
Sbjct: 133 LWECWRGRAWEEEEKSESET 152
>At4g37480.1 68417.m05304 DNAJ heat shock N-terminal
domain-containing protein low similarity to J-Domain
(Residues 2-76) In The Escherichia coli N-Terminal
Fragment (Residues 2-108) Of The Molecular Chaperone
Dnaj GI:1942570; contains Pfam profile PF00226 DnaJ
domain
Length = 523
Score = 26.6 bits (56), Expect = 9.0
Identities = 15/60 (25%), Positives = 26/60 (43%)
Frame = +1
Query: 232 LSGSGCAGEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNHVVANELKALASLYLKRSYH 411
+SG G +E SCY G + + + H + D + L + + ++RSYH
Sbjct: 369 ISGLGTIPDEGSCYVYDGNGAKTHVIMKHRTFLVCDLYDLAFLFMYLSQITTYAVERSYH 428
>At4g37330.1 68417.m05287 cytochrome P450 family protein
Length = 492
Score = 26.6 bits (56), Expect = 9.0
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 343 KDNHVVANELKALASLYLKRSYHYLLSASYFNNYQTNR 456
K++ V+AN K S +L + YLLSASY ++++ R
Sbjct: 93 KNDVVLANRPKFTISKHLGYNATYLLSASYGDHWRNLR 130
>At2g17930.1 68415.m02076 FAT domain-containing protein /
phosphatidylinositol 3- and 4-kinase family protein
contains Pfam profiles PF02259 FAT domain, PF00454
Phosphatidylinositol 3- and 4-kinase, PF02260: FATC
domain
Length = 3795
Score = 26.6 bits (56), Expect = 9.0
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 219 LSSLPVWLWVCWRGRLMLSERR 284
L +P W+W+ W +L+LS +R
Sbjct: 3082 LDQVPHWVWLSWIPQLLLSLQR 3103
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,777,113
Number of Sequences: 28952
Number of extensions: 201274
Number of successful extensions: 505
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 848837888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -