Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1038X
         (568 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   1.8  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   1.8  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   2.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   3.2  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.3  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   9.7  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   9.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.7  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +2

Query: 191 HRQDHRGWRRFFQHFLQRDRSCKHVPR 271
           +R++ +GW+   +H L  ++    VPR
Sbjct: 120 YRENKQGWQNSIRHNLSLNKCFVKVPR 146


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -2

Query: 459 QRACGFCPKPNLRFPFQWCSDHGHSCW 379
           Q  C +   PN       C+D   SCW
Sbjct: 15  QLECNWSSGPNATLQSSACTDDLSSCW 41


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +3

Query: 384 NYARGHYTIGKEIVDLVLDRIRKLADQCTG 473
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 524 PEPVPSPKEVEDQESLQTGTLVSE 453
           PEPVP+P+    Q +    T  SE
Sbjct: 393 PEPVPTPEPQPTQTTESEPTQASE 416


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 204 IGGGDDSFNTFFSETGAASTY 266
           +GGGD S N+      A  TY
Sbjct: 112 LGGGDTSPNSALQRARADKTY 132


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 138 CWELYCLEHGIQPDGQMPTDKT 203
           CW  Y +   +Q  GQ+P  +T
Sbjct: 263 CWSPYIIFDLLQVFGQIPGTQT 284


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = +2

Query: 101 TRWPSRSPDR*CLLGALLPGARHPA*WPD 187
           T W   + ++ C+ G L     H   WP+
Sbjct: 117 TCWNGTATEQLCIGGLLYNERTHSCDWPE 145


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +2

Query: 371 RCGQQLCPWSLH 406
           RCG  L P SLH
Sbjct: 701 RCGNHLPPISLH 712


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,740
Number of Sequences: 336
Number of extensions: 3174
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)