Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1038X
(568 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 220 7e-58
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 215 2e-56
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 201 3e-52
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 113 1e-25
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 98 5e-21
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 93 1e-19
03_01_0034 + 318432-318825,318902-319851 93 2e-19
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 91 4e-19
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 91 4e-19
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 91 4e-19
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 87 1e-17
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 84 9e-17
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 69 2e-12
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 0.85
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 30 1.1
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 2.0
08_02_0767 + 21004373-21004545,21004656-21004711,21004800-210048... 29 2.6
08_01_0312 + 2764744-2767390,2767632-2767990 29 2.6
12_02_0399 - 18600444-18600591,18600626-18601656 29 3.4
10_03_0016 - 7099862-7099967,7100059-7100357,7101862-7102171,710... 29 3.4
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 28 4.5
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 28 4.5
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 27 7.9
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 220 bits (537), Expect = 7e-58
Identities = 98/139 (70%), Positives = 108/139 (77%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P FHPEQLI+G EDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 441 RIRKLADQCTGLQGFLIFH 497
RIRKLAD CTGLQGFL+F+
Sbjct: 121 RIRKLADNCTGLQGFLVFN 139
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 215 bits (526), Expect = 2e-56
Identities = 96/139 (69%), Positives = 107/139 (76%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P FHPEQLI G EDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 441 RIRKLADQCTGLQGFLIFH 497
RIRKLAD CTGLQGFL+F+
Sbjct: 121 RIRKLADNCTGLQGFLVFN 139
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 201 bits (491), Expect = 3e-52
Identities = 89/139 (64%), Positives = 103/139 (74%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGA
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P FHPEQLI+G EDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 441 RIRKLADQCTGLQGFLIFH 497
R+RKLAD CTGLQGFL+F+
Sbjct: 121 RVRKLADNCTGLQGFLVFN 139
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 113 bits (271), Expect = 1e-25
Identities = 54/102 (52%), Positives = 65/102 (63%)
Frame = +3
Query: 192 TDKTIGGGDDSFNTFFSETGAASTYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNE 371
+D T G D+FNTFFSET + P FHPEQLI+ E
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKE 157
Query: 372 DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFH 497
DAANN+ARGHYT+G+E+VDL LDR+RKLAD CTGLQGFL+F+
Sbjct: 158 DAANNFARGHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFN 199
Score = 81.4 bits (192), Expect = 5e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 197
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 97.9 bits (233), Expect = 5e-21
Identities = 51/147 (34%), Positives = 71/147 (48%)
Frame = +3
Query: 63 KKTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFS 242
KK + KMRE + + GQ G QIG+ WE+ C EHGI P G+ + + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL--ERVNVYYN 232
Query: 243 ETGAASTYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEI 422
E P F P+ + G A NN+A+GHYT G E+
Sbjct: 233 EASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 292
Query: 423 VDLVLDRIRKLADQCTGLQGFLIFHFL 503
+D VLD +RK A+ C LQGF + H L
Sbjct: 293 IDSVLDVVRKEAENCDCLQGFQVCHSL 319
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 93.5 bits (222), Expect = 1e-19
Identities = 50/144 (34%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 251
MRE + + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGTSDLQLERVNVYYNEAS 55
Query: 252 AASTYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDL 431
P F P+ + G A NN+A+GHYT G E++D
Sbjct: 56 CGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDS 115
Query: 432 VLDRIRKLADQCTGLQGFLIFHFL 503
VLD +RK A+ C LQGF + H L
Sbjct: 116 VLDVVRKEAENCDCLQGFQVCHSL 139
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 92.7 bits (220), Expect = 2e-19
Identities = 48/141 (34%), Positives = 66/141 (46%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQL--ERVNVYYNEASCGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 118
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
+RK A+ C LQGF + H L
Sbjct: 119 VVRKEAENCDCLQGFQVCHSL 139
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 91.5 bits (217), Expect = 4e-19
Identities = 48/141 (34%), Positives = 66/141 (46%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
+RK A+ C LQGF + H L
Sbjct: 119 VVRKEAENCDCLQGFQVCHSL 139
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 91.5 bits (217), Expect = 4e-19
Identities = 47/141 (33%), Positives = 66/141 (46%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ C EHG+ G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQL--ERINVYYNEASGGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
+RK A+ C LQGF + H L
Sbjct: 119 VVRKEAENCDCLQGFQVCHSL 139
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 91.5 bits (217), Expect = 4e-19
Identities = 48/141 (34%), Positives = 66/141 (46%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
+RK A+ C LQGF + H L
Sbjct: 119 VVRKEAENCDCLQGFQVCHSL 139
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 86.6 bits (205), Expect = 1e-17
Identities = 45/134 (33%), Positives = 63/134 (47%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ C EHGI P G+ + + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQL--ERVNVYYNEASCGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 441 RIRKLADQCTGLQG 482
+RK A+ C LQG
Sbjct: 119 VVRKEAENCDCLQG 132
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 83.8 bits (198), Expect = 9e-17
Identities = 45/133 (33%), Positives = 60/133 (45%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTG--TSPQQLERINVYFNEASGGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E++D VLD
Sbjct: 59 HVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 441 RIRKLADQCTGLQ 479
+RK A+ C LQ
Sbjct: 119 VVRKEAENCDCLQ 131
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 69.3 bits (162), Expect = 2e-12
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 264 YPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNE--DAANNYARGHYTIGKEIVDLVL 437
P + + ++ E + A NN+A G++ G+++VD ++
Sbjct: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIM 119
Query: 438 DRIRKLADQCTGLQGFLIFH 497
D I + AD L+GF++ H
Sbjct: 120 DMIDREADGSDSLEGFVLCH 139
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 30.7 bits (66), Expect = 0.85
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -1
Query: 220 SSPPPMVLSVGIWPSGWMPCSR 155
S P P+ LS I SGW+PCSR
Sbjct: 147 SMPYPITLSAVISLSGWLPCSR 168
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1
Query: 217 SPPPMVLSVGIWPSGWMPCSR 155
+P P+ LSV + SGW+PC+R
Sbjct: 149 NPYPVNLSVSVGLSGWLPCAR 169
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 214 PPPMVLSVGIWPSGWMPCSR 155
P P+ LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>08_02_0767 +
21004373-21004545,21004656-21004711,21004800-21004882,
21004942-21005112,21005806-21005997
Length = 224
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 544 PSIGSEPQSRYLHRRKWKIRNPC-RPVHWSAS 452
P G R L RR W+ R PC RP+H S S
Sbjct: 45 PQEGVGTSRRLLIRRLWQQRPPCLRPIHCSLS 76
>08_01_0312 + 2764744-2767390,2767632-2767990
Length = 1001
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 181 ARCPQTRPSGVETILSTLSSARPE 252
+RCPQ RPS + +LS L ARP+
Sbjct: 969 SRCPQERPS-MREVLSMLQEARPK 991
>12_02_0399 - 18600444-18600591,18600626-18601656
Length = 392
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 326 YRQLFSSRTTYYW**RCGQQLCPWSLHHWK 415
+R S+RTTY +C Q CPW +H +K
Sbjct: 236 FRVKISNRTTYDV--KCTQAGCPWRVHGYK 263
>10_03_0016 -
7099862-7099967,7100059-7100357,7101862-7102171,
7104402-7105054,7105266-7105554,7106549-7106634
Length = 580
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 326 YRQLFSSRTTYYW**RCGQQLCPWSLHHWK 415
+R S+RTTY +C Q CPW +H +K
Sbjct: 235 FRVKVSNRTTYKV--KCTQAGCPWRVHGYK 262
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 124 RSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPE 252
++ M A T+ S +S P + PSGV L + SSA PE
Sbjct: 690 QTAMAASQATSISRGASQPLAVPNSMPSGVNFPLQSSSSAPPE 732
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1
Query: 208 PMVLSVGIWPSGWMPCSR 155
P+ LS I SGW+PCSR
Sbjct: 184 PVTLSAVIGLSGWLPCSR 201
>10_08_0253 -
16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 142 GSFTAWSTASSLMARCPQTRPS-GVETILSTLSSARP 249
GSF+A + A+ L+ARCP R V + ST P
Sbjct: 5 GSFSAAAAAARLLARCPALRADPRVLALASTAGGGGP 41
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,773,731
Number of Sequences: 37544
Number of extensions: 380704
Number of successful extensions: 1283
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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