Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1038X
(568 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 233 7e-62
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 233 7e-62
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 231 3e-61
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 230 5e-61
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 229 1e-60
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 224 3e-59
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 221 4e-58
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 209 1e-54
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 145 2e-35
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 129 1e-30
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 9e-26
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 113 9e-26
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 3e-24
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 107 6e-24
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 4e-22
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 92 3e-19
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 90 1e-18
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 89 2e-18
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 3e-16
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 75 5e-14
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 63 1e-10
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 53 1e-07
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 52 3e-07
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 36 0.030
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 34 0.093
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 31 0.66
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_1004| Best HMM Match : CPSase_sm_chain (HMM E-Value=0) 27 8.1
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 233 bits (570), Expect = 7e-62
Identities = 107/139 (76%), Positives = 111/139 (79%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P FHPEQL+TG EDAANNYARGHYT+GKEIVDLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 441 RIRKLADQCTGLQGFLIFH 497
RIRKLADQCTGLQGFLIFH
Sbjct: 121 RIRKLADQCTGLQGFLIFH 139
Score = 231 bits (566), Expect = 2e-61
Identities = 107/138 (77%), Positives = 110/138 (79%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 264 YPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLDR 443
P FHPEQLITG EDAANNYARGHYT+GKEIVDLVLDR
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDR 554
Query: 444 IRKLADQCTGLQGFLIFH 497
IRKLADQCTGLQGFLIFH
Sbjct: 555 IRKLADQCTGLQGFLIFH 572
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 233 bits (570), Expect = 7e-62
Identities = 110/141 (78%), Positives = 111/141 (78%)
Frame = +3
Query: 75 IKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 254
I RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 122
Query: 255 ASTYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLV 434
P FHPEQLITG EDAANNYARGHYTIGKEIVDLV
Sbjct: 123 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 182
Query: 435 LDRIRKLADQCTGLQGFLIFH 497
LDRIRKLADQCTGLQGFLIFH
Sbjct: 183 LDRIRKLADQCTGLQGFLIFH 203
Score = 231 bits (564), Expect = 4e-61
Identities = 105/139 (75%), Positives = 111/139 (79%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P FHPEQLITG EDAANNYARGHYT+GKE++DLVLD
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 441 RIRKLADQCTGLQGFLIFH 497
RIRKLADQCTGLQGFLIFH
Sbjct: 706 RIRKLADQCTGLQGFLIFH 724
Score = 131 bits (317), Expect = 3e-31
Identities = 56/62 (90%), Positives = 58/62 (93%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 264 YP 269
P
Sbjct: 574 VP 575
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTV 301
F F + KHVPRAVFVDLEPTV
Sbjct: 561 FNTFFSETGAGKHVPRAVFVDLEPTV 586
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 231 bits (565), Expect = 3e-61
Identities = 106/138 (76%), Positives = 110/138 (79%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 264 YPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLDR 443
P FHPEQLITG EDAANNYARGHYT+GKEI+DLVLDR
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 444 IRKLADQCTGLQGFLIFH 497
IRKLADQCTGLQGFLIFH
Sbjct: 121 IRKLADQCTGLQGFLIFH 138
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 230 bits (563), Expect = 5e-61
Identities = 106/139 (76%), Positives = 110/139 (79%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P FHPEQLITG EDAANNYARGHYTIGKEI+DLVLD
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 441 RIRKLADQCTGLQGFLIFH 497
R RKLADQCTGLQGFLIFH
Sbjct: 121 RCRKLADQCTGLQGFLIFH 139
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 229 bits (560), Expect = 1e-60
Identities = 105/138 (76%), Positives = 110/138 (79%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 264 YPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLDR 443
P FHPEQLITG EDAANNYARGHYT+GKE++DLVLDR
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDR 925
Query: 444 IRKLADQCTGLQGFLIFH 497
IRKLADQCTGLQGFLIFH
Sbjct: 926 IRKLADQCTGLQGFLIFH 943
Score = 221 bits (541), Expect = 2e-58
Identities = 100/138 (72%), Positives = 108/138 (78%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETGA
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 264 YPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLDR 443
P FHPEQLITG EDAANNYARGHYT+GKE +D+VLDR
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 444 IRKLADQCTGLQGFLIFH 497
+RKLAD CTGLQGFLIFH
Sbjct: 493 LRKLADGCTGLQGFLIFH 510
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 224 bits (548), Expect = 3e-59
Identities = 102/139 (73%), Positives = 109/139 (78%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG+
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P FHPEQLITG EDAANNYARGHYT+GKE++D VLD
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 441 RIRKLADQCTGLQGFLIFH 497
R+RKLAD CTGLQGFLIFH
Sbjct: 121 RLRKLADGCTGLQGFLIFH 139
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 221 bits (539), Expect = 4e-58
Identities = 99/138 (71%), Positives = 108/138 (78%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 264 YPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLDR 443
P FHPEQLITG EDAANNYARGHYT+GK+ +D VLDR
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDR 539
Query: 444 IRKLADQCTGLQGFLIFH 497
IRKLADQC+GLQGFL+FH
Sbjct: 540 IRKLADQCSGLQGFLVFH 557
Score = 196 bits (477), Expect = 1e-50
Identities = 87/124 (70%), Positives = 96/124 (77%)
Frame = +3
Query: 126 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAASTYPVXXXXXXXXXXX 305
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 306 XXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 485
FHPEQLITG EDAANNYARGHYT+GK+++++VLDR+RKLADQCTGLQGF
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
Query: 486 LIFH 497
LIFH
Sbjct: 121 LIFH 124
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 209 bits (511), Expect = 1e-54
Identities = 101/139 (72%), Positives = 106/139 (76%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETGA
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P T PEQLITG EDAANNYARGHYTIGK+ VD VLD
Sbjct: 61 HVP----------RAVFVDLEPTVVALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 441 RIRKLADQCTGLQGFLIFH 497
R+RKLADQC+GLQGF IFH
Sbjct: 111 RLRKLADQCSGLQGFFIFH 129
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/27 (66%), Positives = 19/27 (70%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVV 304
F F + KHVPRAVFVDLEPTVV
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVV 75
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 145 bits (352), Expect = 2e-35
Identities = 68/104 (65%), Positives = 74/104 (71%)
Frame = +3
Query: 186 MPTDKTIGGGDDSFNTFFSETGAASTYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITG 365
MP+DKTIGGGDDSFNTFF+ETGA P FHPEQL++G
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSG 60
Query: 366 NEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFH 497
EDAANNYARGHYT+GKE +DL LDRIRKLADQCTGLQGFLIFH
Sbjct: 61 KEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLIFH 104
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 129 bits (312), Expect = 1e-30
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 261 TYP 269
P
Sbjct: 61 HVP 63
Score = 37.9 bits (84), Expect = 0.006
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +2
Query: 224 FQHFLQRDRSCKHVPRAVFVDLEPTVVDEVR 316
F F KHVPRAVFVDLEP+VV ++
Sbjct: 49 FNTFFSETGGGKHVPRAVFVDLEPSVVGRMK 79
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 113 bits (272), Expect = 9e-26
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +3
Query: 339 FHPEQLITGNEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFH 497
FHPEQLITG EDAANNYARGHYT+GKE++DLVLDRIRKLADQCTGLQGFLIFH
Sbjct: 24 FHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLIFH 76
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +2
Query: 299 VVDEVRTGTYRQLF 340
+ DEVRTGTYRQLF
Sbjct: 11 LADEVRTGTYRQLF 24
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 113 bits (272), Expect = 9e-26
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +3
Query: 339 FHPEQLITGNEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFH 497
FHPEQLITG EDAANNYARGHYT+GKE++DLVLDRIRKLADQCTGLQGFLIFH
Sbjct: 12 FHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLIFH 64
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 108 bits (260), Expect = 3e-24
Identities = 45/58 (77%), Positives = 52/58 (89%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 254
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETAS 253
Score = 35.9 bits (79), Expect = 0.023
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 450 KLADQCTGLQGFLIFH 497
K ADQCTGLQGFL+FH
Sbjct: 255 KHADQCTGLQGFLVFH 270
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 107 bits (257), Expect = 6e-24
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = +3
Query: 339 FHPEQLITGNEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFH 497
FHPEQL++G EDAANNYARGHYT+GKE +DL LDRIRKLADQCTGLQGFLIFH
Sbjct: 12 FHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLIFH 64
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 101 bits (242), Expect = 4e-22
Identities = 41/53 (77%), Positives = 51/53 (96%)
Frame = +3
Query: 339 FHPEQLITGNEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFH 497
+HPEQ+I+G EDAANNYARGHYTIGKE+V++V+D+IRK+ DQC+GLQGFLIFH
Sbjct: 998 YHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIRKMTDQCSGLQGFLIFH 1050
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLF 340
K+VPRAV VDLEPTV+DEVRTG YR L+
Sbjct: 971 KYVPRAVLVDLEPTVIDEVRTGMYRYLY 998
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 92.3 bits (219), Expect = 3e-19
Identities = 51/146 (34%), Positives = 66/146 (45%)
Frame = +3
Query: 66 KTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 245
K KMRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNE 266
Query: 246 TGAASTYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIV 425
P F P+ + G A NN+A+GHYT G E+V
Sbjct: 267 ATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELV 326
Query: 426 DLVLDRIRKLADQCTGLQGFLIFHFL 503
D VLD +RK A+ C LQGF + H L
Sbjct: 327 DSVLDVVRKEAESCDCLQGFQLTHSL 352
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 90.2 bits (214), Expect = 1e-18
Identities = 48/141 (34%), Positives = 66/141 (46%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE +S+ GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLD 118
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
+RK A+ C +QGF + H L
Sbjct: 119 VVRKEAESCDCIQGFQLTHSL 139
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 89.4 bits (212), Expect = 2e-18
Identities = 49/141 (34%), Positives = 64/141 (45%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL--ERINVYYNEATGGK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
+RK A+ C LQGF + H L
Sbjct: 119 VVRKEAESCDCLQGFQLTHSL 139
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 82.2 bits (194), Expect = 3e-16
Identities = 35/39 (89%), Positives = 38/39 (97%)
Frame = +3
Query: 339 FHPEQLITGNEDAANNYARGHYTIGKEIVDLVLDRIRKL 455
FHPEQLITG EDAANNYARGHYT+GKE++DLVLDRIRKL
Sbjct: 12 FHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKL 50
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 74.5 bits (175), Expect = 5e-14
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +3
Query: 339 FHPEQLITGNEDAANNYARGHYTIGKEIVDLVLDRIRKL 455
FHP+QLITG EDAANNYARGHYT+GKE +DL L++IRKL
Sbjct: 12 FHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRKL 50
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 63.3 bits (147), Expect = 1e-10
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = +3
Query: 339 FHPEQLITGNEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHFL 503
F P+ + G A NN+A+GHYT G E+VD VLD +RK A+ C +QGF + H L
Sbjct: 30 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCIQGFQLTHSL 84
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLF 340
K+VPRAV VDLEP +D VR+G + Q+F
Sbjct: 3 KYVPRAVLVDLEPGTMDSVRSGPFGQIF 30
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 53.2 bits (122), Expect = 1e-07
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +3
Query: 339 FHPEQLITGNEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHFL 503
F P+ + AANN+A+GHY+ G E++D + D +RK A+ C +QG + L
Sbjct: 41 FRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRKEAENCDCMQGVQLIQAL 95
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLF 340
++VPR++ VDLEP +D VR G +F
Sbjct: 14 RYVPRSILVDLEPGTMDAVRGGPLGNMF 41
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 52.0 bits (119), Expect = 3e-07
Identities = 24/43 (55%), Positives = 31/43 (72%)
Frame = +3
Query: 375 AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHFL 503
AANN+A+G YT G E++D +D IRKLA+ C +QGF I H L
Sbjct: 5 AANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSL 47
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/28 (57%), Positives = 22/28 (78%)
Frame = +2
Query: 257 KHVPRAVFVDLEPTVVDEVRTGTYRQLF 340
K+VPRA+ VDLEP +D VR+G + Q+F
Sbjct: 58 KYVPRAILVDLEPGTMDSVRSGPFGQIF 85
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 261 TYP 269
P
Sbjct: 59 YVP 61
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 35.5 bits (78), Expect = 0.030
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 456 ADQCTGLQGFLIFH 497
ADQCTGLQGFLIFH
Sbjct: 1 ADQCTGLQGFLIFH 14
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 33.9 bits (74), Expect = 0.093
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 351 QLITGNEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFL 488
Q + + NN+A G G + +D VLD +++ ++C L GFL
Sbjct: 97 QQFSQKRGSGNNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGFL 142
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 31.1 bits (67), Expect = 0.66
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +3
Query: 354 LITGNEDAANNYARGHY--TI---GKEIVDLVLDRIRKLADQCTGLQGFLIFHFL 503
+I G NN+A G++ +I G ++ + +D +RK ++C G ++ H L
Sbjct: 69 IIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDAMRKEVERCDSFAGTIVMHSL 123
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 141 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 245
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 216 LHPRWSCLWASGHQAGCRAPGSKAPSRHYRSGLRLGQ 106
LH ++S L+ G +G ++PG AP RH R+ RL Q
Sbjct: 32 LHFQYSGLYG-GVDSGKQSPGVMAPPRHSRNRNRLSQ 67
>SB_1004| Best HMM Match : CPSase_sm_chain (HMM E-Value=0)
Length = 2007
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 473 SARIPDLPLPSVKVPALGFTSY*WSVSPLTTA 568
S +P+ + VP++G +SY VSP+T+A
Sbjct: 172 SPTVPNKTTNGISVPSVGRSSYSTRVSPITSA 203
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,918,386
Number of Sequences: 59808
Number of extensions: 406322
Number of successful extensions: 1248
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1337207630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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