Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1038X
(568 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 217 5e-57
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 217 5e-57
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 217 5e-57
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 215 2e-56
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 191 3e-49
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 191 3e-49
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 190 5e-49
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 190 8e-49
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 190 8e-49
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 188 2e-48
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 188 2e-48
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 186 1e-47
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 171 3e-43
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 167 4e-42
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 155 3e-38
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 124 6e-29
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 95 4e-20
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 94 7e-20
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 93 1e-19
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 93 1e-19
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 93 1e-19
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 91 5e-19
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 85 4e-17
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 85 4e-17
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 44 1e-04
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 44 1e-04
U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte grow... 29 3.1
Z79639-3|CAB01918.1| 385|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z81539-6|CAB63201.2| 236|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z37983-10|CAA86060.4| 267|Caenorhabditis elegans Hypothetical p... 27 9.4
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 217 bits (530), Expect = 5e-57
Identities = 98/139 (70%), Positives = 108/139 (77%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P S FHPEQLITG EDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 441 RIRKLADQCTGLQGFLIFH 497
RIR+LAD CTGLQGFL+FH
Sbjct: 121 RIRRLADNCTGLQGFLVFH 139
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 217 bits (530), Expect = 5e-57
Identities = 98/139 (70%), Positives = 108/139 (77%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P S FHPEQLITG EDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 441 RIRKLADQCTGLQGFLIFH 497
RIR+LAD CTGLQGFL+FH
Sbjct: 121 RIRRLADNCTGLQGFLVFH 139
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 217 bits (530), Expect = 5e-57
Identities = 98/139 (70%), Positives = 108/139 (77%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P S FHPEQLITG EDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 441 RIRKLADQCTGLQGFLIFH 497
RIR+LAD CTGLQGFL+FH
Sbjct: 121 RIRRLADNCTGLQGFLVFH 139
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 215 bits (525), Expect = 2e-56
Identities = 97/138 (70%), Positives = 107/138 (77%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 264 YPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLDR 443
P S FHPEQLITG EDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 444 IRKLADQCTGLQGFLIFH 497
IR+LAD CTGLQGFL+FH
Sbjct: 121 IRRLADNCTGLQGFLVFH 138
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 191 bits (465), Expect = 3e-49
Identities = 88/139 (63%), Positives = 99/139 (71%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P FHPEQ+ITG EDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 441 RIRKLADQCTGLQGFLIFH 497
RIR+LAD C+GLQGF +FH
Sbjct: 119 RIRRLADNCSGLQGFFVFH 137
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 191 bits (465), Expect = 3e-49
Identities = 88/139 (63%), Positives = 99/139 (71%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P FHPEQ+ITG EDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 441 RIRKLADQCTGLQGFLIFH 497
RIR+LAD C+GLQGF +FH
Sbjct: 119 RIRRLADNCSGLQGFFVFH 137
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 190 bits (464), Expect = 5e-49
Identities = 85/140 (60%), Positives = 101/140 (72%)
Frame = +3
Query: 78 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAA 257
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET A
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 258 STYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVL 437
P + FHPEQL+TG EDAANNYARGHYTIGKEI+D+V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 438 DRIRKLADQCTGLQGFLIFH 497
DR+R+L + C GLQGFL+FH
Sbjct: 125 DRVRRLVENCRGLQGFLVFH 144
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 190 bits (462), Expect = 8e-49
Identities = 87/139 (62%), Positives = 99/139 (71%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P FHPEQ+ITG EDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 441 RIRKLADQCTGLQGFLIFH 497
RIR+LAD C+GLQGF +FH
Sbjct: 119 RIRRLADNCSGLQGFFVFH 137
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 190 bits (462), Expect = 8e-49
Identities = 87/139 (62%), Positives = 99/139 (71%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P FHPEQ+ITG EDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 441 RIRKLADQCTGLQGFLIFH 497
RIR+LAD C+GLQGF +FH
Sbjct: 119 RIRRLADNCSGLQGFFVFH 137
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 188 bits (458), Expect = 2e-48
Identities = 86/139 (61%), Positives = 99/139 (71%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P + FHPEQ+ITG EDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 441 RIRKLADQCTGLQGFLIFH 497
RIR+LAD C+GLQGF +FH
Sbjct: 119 RIRRLADNCSGLQGFFVFH 137
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 188 bits (458), Expect = 2e-48
Identities = 86/139 (61%), Positives = 99/139 (71%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P + FHPEQ+ITG EDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 441 RIRKLADQCTGLQGFLIFH 497
RIR+LAD C+GLQGF +FH
Sbjct: 119 RIRRLADNCSGLQGFFVFH 137
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 186 bits (453), Expect = 1e-47
Identities = 83/139 (59%), Positives = 98/139 (70%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P FHPEQLI+G EDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 441 RIRKLADQCTGLQGFLIFH 497
R+R+L ++C LQGFLIFH
Sbjct: 121 RVRRLTERCQSLQGFLIFH 139
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 171 bits (416), Expect = 3e-43
Identities = 81/139 (58%), Positives = 90/139 (64%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P FHPEQ++TG EDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 441 RIRKLADQCTGLQGFLIFH 497
RIR+LA+ C GLQGF +FH
Sbjct: 118 RIRRLANNCEGLQGFFVFH 136
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 167 bits (407), Expect = 4e-42
Identities = 76/138 (55%), Positives = 93/138 (67%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 264 YPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLDR 443
P S FHPEQL++G EDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 444 IRKLADQCTGLQGFLIFH 497
+++LA+ C GLQGF+IFH
Sbjct: 128 VKRLAENCNGLQGFVIFH 145
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 155 bits (375), Expect = 3e-38
Identities = 70/138 (50%), Positives = 87/138 (63%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 264 YPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLDR 443
P + FHP+Q+I G EDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 444 IRKLADQCTGLQGFLIFH 497
IRK + C GLQGFL+FH
Sbjct: 125 IRKQTENCEGLQGFLVFH 142
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 124 bits (298), Expect = 6e-29
Identities = 56/117 (47%), Positives = 73/117 (62%)
Frame = +3
Query: 147 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAASTYPVXXXXXXXXXXXXXXXXAH 326
++CLEHGIQPDG D T ++ NTFF+ET P
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 327 TDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFH 497
S FHPEQL++G EDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFH 117
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 94.7 bits (225), Expect = 4e-20
Identities = 51/141 (36%), Positives = 67/141 (47%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
+RK A+ C LQGF + H L
Sbjct: 119 VVRKEAEGCDCLQGFQLTHSL 139
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 93.9 bits (223), Expect = 7e-20
Identities = 51/141 (36%), Positives = 68/141 (48%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
IRK A+ C LQGF + H L
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSL 139
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 93.5 bits (222), Expect = 1e-19
Identities = 51/141 (36%), Positives = 68/141 (48%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
IRK A+ C LQGF + H L
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSL 139
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 93.1 bits (221), Expect = 1e-19
Identities = 50/141 (35%), Positives = 68/141 (48%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
+RK A+ LQGF + H L
Sbjct: 119 VVRKEAESTDCLQGFQLTHSL 139
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 93.1 bits (221), Expect = 1e-19
Identities = 50/141 (35%), Positives = 68/141 (48%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
+RK A+ LQGF + H L
Sbjct: 119 VVRKEAESTDCLQGFQLTHSL 139
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 91.1 bits (216), Expect = 5e-19
Identities = 49/141 (34%), Positives = 65/141 (46%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
+RK A+ C LQGF + H L
Sbjct: 119 VVRKEAESCDCLQGFQMTHSL 139
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 84.6 bits (200), Expect = 4e-17
Identities = 48/141 (34%), Positives = 64/141 (45%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F PE ++G A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
IR+ A+ L+GF + H L
Sbjct: 119 VIRREAEAADSLEGFQLIHSL 139
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 84.6 bits (200), Expect = 4e-17
Identities = 48/141 (34%), Positives = 64/141 (45%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F PE ++G A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
IR+ A+ L+GF + H L
Sbjct: 119 VIRREAEAADSLEGFQLIHSL 139
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 43.6 bits (98), Expect = 1e-04
Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 2/137 (1%)
Frame = +3
Query: 93 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAASTYPV 272
++VHVGQ G Q+ A W+ EHGI GQ + + D F+
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLL--FYQADDDHYVPRA 65
Query: 273 XXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNE--DAANNYARGHYTIGKEIVDLVLDRI 446
+ + F+ + + + A NN+A G Y G+E+ + ++D I
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 447 RKLADQCTGLQGFLIFH 497
+ A+ L G L H
Sbjct: 125 IREAENTNNLDGILFTH 141
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 233 FLQRDRSCKHVPRAVFVDLEPTVVD-EVRTGTYRQLFSS 346
F Q D +VPRAV VDLEP V++ +++ + LF++
Sbjct: 53 FYQADDD-HYVPRAVLVDLEPRVINGMMQSPNFSNLFNT 90
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 43.6 bits (98), Expect = 1e-04
Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 2/137 (1%)
Frame = +3
Query: 93 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAASTYPV 272
++VHVGQ G Q+ A W+ EHGI GQ + + D F+
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLL--FYQADDDHYVPRA 65
Query: 273 XXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNE--DAANNYARGHYTIGKEIVDLVLDRI 446
+ + F+ + + + A NN+A G Y G+E+ + ++D I
Sbjct: 66 VLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDII 124
Query: 447 RKLADQCTGLQGFLIFH 497
+ A+ L G L H
Sbjct: 125 IREAENTNNLDGILFTH 141
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 233 FLQRDRSCKHVPRAVFVDLEPTVVD-EVRTGTYRQLFSS 346
F Q D +VPRAV VDLEP V++ +++ + LF++
Sbjct: 53 FYQADDD-HYVPRAVLVDLEPRVINGMMQSPNFSNLFNT 90
>U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte growth
factor-regulatedtk substrate (hrs) family protein 1
protein.
Length = 729
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 532 SEPQSRYLHRRKWKIRNPCRPVHWSASLRILSKTKSTISFPMV 404
S+P +RYL+R W+ + + WS+ LS T S P +
Sbjct: 313 SDPLARYLNRDYWQQKKEGKVEDWSSRSSALSATAPPPSEPSI 355
>Z79639-3|CAB01918.1| 385|Caenorhabditis elegans Hypothetical
protein F54E4.4 protein.
Length = 385
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 527 TPEPVPSPKEVEDQESL 477
TP P+P+PK ED+ SL
Sbjct: 245 TPAPIPTPKVCEDKHSL 261
>Z81539-6|CAB63201.2| 236|Caenorhabditis elegans Hypothetical
protein F46A8.8 protein.
Length = 236
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -3
Query: 524 PEPVPSPKEVEDQESL 477
P PVP+PK VE+ E+L
Sbjct: 85 PRPVPTPKPVENMETL 100
>Z37983-10|CAA86060.4| 267|Caenorhabditis elegans Hypothetical
protein B0393.7 protein.
Length = 267
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -2
Query: 504 EGSGRSGILADRYTGQRACGFCPKP 430
E G+ IL D GQ+ CG C +P
Sbjct: 68 EWCGQGTILCDAGVGQKRCGKCVRP 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,736,779
Number of Sequences: 27780
Number of extensions: 299028
Number of successful extensions: 901
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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