Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1038X
(568 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 221 3e-58
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 221 3e-58
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 219 8e-58
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 219 8e-58
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 201 2e-52
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 201 2e-52
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 192 1e-49
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 96 1e-20
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 96 1e-20
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 95 4e-20
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 95 4e-20
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 94 7e-20
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 93 9e-20
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 91 5e-19
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 91 6e-19
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 88 3e-18
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 65 4e-11
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 65 4e-11
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 30 0.94
At4g37190.1 68417.m05265 expressed protein 28 3.8
At2g31690.1 68415.m03868 lipase class 3 family protein similar t... 28 3.8
At1g53200.1 68414.m06030 expressed protein 28 5.0
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 27 8.7
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 27 8.7
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 27 8.7
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 27 8.7
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 27 8.7
At3g04560.1 68416.m00484 expressed protein 27 8.7
At2g29080.1 68415.m03535 FtsH protease, putative similar to AAA-... 27 8.7
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 221 bits (539), Expect = 3e-58
Identities = 98/139 (70%), Positives = 109/139 (78%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P FHPEQLI+G EDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 441 RIRKLADQCTGLQGFLIFH 497
RIRKLAD CTGLQGFL+F+
Sbjct: 121 RIRKLADNCTGLQGFLVFN 139
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 221 bits (539), Expect = 3e-58
Identities = 98/139 (70%), Positives = 109/139 (78%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P FHPEQLI+G EDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 441 RIRKLADQCTGLQGFLIFH 497
RIRKLAD CTGLQGFL+F+
Sbjct: 121 RIRKLADNCTGLQGFLVFN 139
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 219 bits (536), Expect = 8e-58
Identities = 98/139 (70%), Positives = 108/139 (77%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P FHPEQLI+G EDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 441 RIRKLADQCTGLQGFLIFH 497
RIRKLAD CTGLQGFL+F+
Sbjct: 121 RIRKLADNCTGLQGFLVFN 139
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 219 bits (536), Expect = 8e-58
Identities = 98/139 (70%), Positives = 108/139 (77%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P FHPEQLI+G EDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 441 RIRKLADQCTGLQGFLIFH 497
RIRKLAD CTGLQGFL+F+
Sbjct: 121 RIRKLADNCTGLQGFLVFN 139
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 201 bits (491), Expect = 2e-52
Identities = 89/139 (64%), Positives = 103/139 (74%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGA
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P FHPEQLI+G EDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 441 RIRKLADQCTGLQGFLIFH 497
R+RKLAD CTGLQGFL+F+
Sbjct: 121 RVRKLADNCTGLQGFLVFN 139
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 201 bits (491), Expect = 2e-52
Identities = 89/139 (64%), Positives = 103/139 (74%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGA
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P FHPEQLI+G EDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 441 RIRKLADQCTGLQGFLIFH 497
R+RKLAD CTGLQGFL+F+
Sbjct: 121 RVRKLADNCTGLQGFLVFN 139
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 192 bits (469), Expect = 1e-49
Identities = 84/139 (60%), Positives = 101/139 (72%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P FHPEQLI+G EDAANN+ARGHYT+G+EIVD L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 441 RIRKLADQCTGLQGFLIFH 497
R+RKLAD CTGLQGFL+F+
Sbjct: 121 RLRKLADNCTGLQGFLVFN 139
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 96.3 bits (229), Expect = 1e-20
Identities = 49/141 (34%), Positives = 67/141 (47%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
+RK A+ C LQGF + H L
Sbjct: 119 VVRKEAENCDCLQGFQVCHSL 139
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 96.3 bits (229), Expect = 1e-20
Identities = 49/141 (34%), Positives = 67/141 (47%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
+RK A+ C LQGF + H L
Sbjct: 119 VVRKEAENCDCLQGFQVCHSL 139
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 94.7 bits (225), Expect = 4e-20
Identities = 50/144 (34%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 251
MRE + + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGNSDLQLERVNVYYNEAS 55
Query: 252 AASTYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDL 431
P F P+ + G A NN+A+GHYT G E++D
Sbjct: 56 CGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDA 115
Query: 432 VLDRIRKLADQCTGLQGFLIFHFL 503
VLD +RK A+ C LQGF + H L
Sbjct: 116 VLDVVRKEAENCDCLQGFQVCHSL 139
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 94.7 bits (225), Expect = 4e-20
Identities = 49/141 (34%), Positives = 67/141 (47%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + N +++E
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSA-DLQLERINVYYNEASGGR 59
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
+RK A+ C LQGF + H L
Sbjct: 120 VVRKEAENCDCLQGFQVCHSL 140
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 93.9 bits (223), Expect = 7e-20
Identities = 50/141 (35%), Positives = 66/141 (46%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQL--ERINVYFNEASGGK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
+RK A+ C LQGF + H L
Sbjct: 119 VVRKEAENCDCLQGFQVCHSL 139
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 93.5 bits (222), Expect = 9e-20
Identities = 49/141 (34%), Positives = 67/141 (47%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
+RK A+ C LQGF + H L
Sbjct: 120 VVRKEAENCDCLQGFQVCHSL 140
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 91.1 bits (216), Expect = 5e-19
Identities = 47/141 (33%), Positives = 66/141 (46%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQL--ERVNVYYNEASCGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
+RK A+ C LQGF + H L
Sbjct: 119 VVRKEAENCDCLQGFQVCHSL 139
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 90.6 bits (215), Expect = 6e-19
Identities = 48/141 (34%), Positives = 67/141 (47%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQL--ERVNVYYNEASCGR 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
+RK A+ C LQGF + H L
Sbjct: 119 VVRKEAENCDCLQGFQVCHSL 139
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 88.2 bits (209), Expect = 3e-18
Identities = 48/141 (34%), Positives = 65/141 (46%)
Frame = +3
Query: 81 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 260
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQL--ERIDVYFNEASGGK 58
Query: 261 TYPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNEDAANNYARGHYTIGKEIVDLVLD 440
P F P+ + G A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 441 RIRKLADQCTGLQGFLIFHFL 503
+RK A+ LQGF + H L
Sbjct: 119 VVRKEAENSDCLQGFQVCHSL 139
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 64.9 bits (151), Expect = 4e-11
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 264 YPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNE--DAANNYARGHYTIGKEIVDLVL 437
P + ++ E + + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 438 DRIRKLADQCTGLQGFLIFH 497
D I + AD L+GF++ H
Sbjct: 120 DMIDREADGSDSLEGFVLCH 139
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 64.9 bits (151), Expect = 4e-11
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Frame = +3
Query: 84 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAST 263
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 264 YPVXXXXXXXXXXXXXXXXAHTDSCFHPEQLITGNE--DAANNYARGHYTIGKEIVDLVL 437
P + ++ E + + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 438 DRIRKLADQCTGLQGFLIFH 497
D I + AD L+GF++ H
Sbjct: 120 DMIDREADGSDSLEGFVLCH 139
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 30.3 bits (65), Expect = 0.94
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = -1
Query: 256 AAPVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 125
A PVS L +SPP +W SGW P +PI
Sbjct: 99 APPVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Frame = +3
Query: 333 SCFHPEQLITGNEDAANNYARGHYTIGKEIV------DLVLDRIRKLADQCTGLQG 482
S +HP+ L N ++ A +Y IGK++ + + DR+R ++C +QG
Sbjct: 158 SHYHPQSLYELNGLWMDSQAFNNYGIGKDVFSEASRGEEICDRLRFFVEECDHIQG 213
>At2g31690.1 68415.m03868 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 484
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 304 NNSRFKIDEDSTGYVLAAPVSLKKVLKESSPPPM 203
N R K S+ L APV L + SSPPP+
Sbjct: 38 NPKRLKTANSSSSSSLLAPVILNSPVASSSPPPI 71
>At1g53200.1 68414.m06030 expressed protein
Length = 613
Score = 27.9 bits (59), Expect = 5.0
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -1
Query: 568 CRSQRRDAPSIGSEP-QSRYLHRRKWKIRNPCRPVHWSASLRILS-KTKSTISFP 410
CR++ IG + +S YL+R +R R HW+ + R+LS K TI+ P
Sbjct: 53 CRAKPSYLLCIGPKSSRSEYLNRLPGLLRELLRNRHWNDASRVLSVLMKGTINDP 107
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 245 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 75
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 245 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 75
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 245 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 75
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -3
Query: 245 LAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRDALTHFD 75
+A+ V R V T +G + +DA++QA KLP I + G+ + D + FD
Sbjct: 250 IADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVGDGPWDMMREFD 304
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 192 WASGHQAGCRAPGSKAPSRHYRSGLR 115
W+SGHQ CR G + ++GLR
Sbjct: 90 WSSGHQRNCRDYGITTLTPSAKNGLR 115
>At3g04560.1 68416.m00484 expressed protein
Length = 417
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 560 STERRSINRK*TPEPVPSPKEVEDQESLQTGTLVSE 453
S +RS + TPEPVP P+ + + +T T SE
Sbjct: 66 SALKRSKPSESTPEPVPEPEAPKKRLQFKTSTDASE 101
>At2g29080.1 68415.m03535 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 809
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1
Query: 319 SADLINNSRFKIDEDSTGYVLAAPVSLKKVLKESSPPP 206
SA++ N RFK + T AA +++ V+ + +PPP
Sbjct: 764 SAEVTNYDRFKSGFEETEKDSAATPTVEPVVDDGAPPP 801
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,032,553
Number of Sequences: 28952
Number of extensions: 281585
Number of successful extensions: 928
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1092379416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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