Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1037
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   6.2  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   8.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/25 (24%), Positives = 16/25 (64%)
 Frame = -1

Query: 385 PNLVYYMIVSSLSVSEYLNSICHNW 311
           P+L+ ++  S+   + ++NS+ + W
Sbjct: 439 PSLIIHVSTSAYVATVWINSVINRW 463


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 217 SLAKMERNMKYTQHK*NI 270
           SLA+M  +M+ TQH  NI
Sbjct: 490 SLAEMTSHMQQTQHYTNI 507


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 734 FMSLSVAWRLPDTLPDR 684
           F  L +AW  P+T P +
Sbjct: 140 FDGLDLAWEFPETKPKK 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,203
Number of Sequences: 336
Number of extensions: 4175
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)