BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1037 (769 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 29 0.16 AY263175-1|AAP78790.1| 814|Anopheles gambiae TmcA-like protein ... 26 1.5 AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 25 1.9 AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 24 5.9 AF457552-1|AAL68782.1| 311|Anopheles gambiae D7 protein long fo... 24 5.9 AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 23 7.9 >AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein protein. Length = 1645 Score = 29.1 bits (62), Expect = 0.16 Identities = 11/34 (32%), Positives = 20/34 (58%) Frame = +1 Query: 661 RQNQRQDYLSGSVSGSLQATDRLMKGAPGHIPFT 762 +Q Q+Q Y + G++ T+ ++ GAP +P T Sbjct: 1051 QQQQQQQYAGSNAGGTVSTTNPVIGGAPALLPTT 1084 >AY263175-1|AAP78790.1| 814|Anopheles gambiae TmcA-like protein protein. Length = 814 Score = 25.8 bits (54), Expect = 1.5 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = -1 Query: 379 LVYYMIVSSLSVSEYLNSICHNWILTFCKPD-WWCGGVCFIYVACISYFFPFL 224 LV ++I+ L +S Y + + + D WW + ++ IS+FFP + Sbjct: 334 LVNFLILGLLVISAYEVILVVKRSMDIKESDSWWRRNEITVVMSLISFFFPMI 386 >AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase protein. Length = 1173 Score = 25.4 bits (53), Expect = 1.9 Identities = 8/20 (40%), Positives = 15/20 (75%) Frame = +2 Query: 251 RNINETYPTTPPVWFAESED 310 R + + +PT PPV++ E++D Sbjct: 405 RIVTDLFPTHPPVYWPETDD 424 >AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein protein. Length = 166 Score = 23.8 bits (49), Expect = 5.9 Identities = 13/41 (31%), Positives = 17/41 (41%) Frame = +1 Query: 595 EDAGRSNKDDMETEHLATLERLRQNQRQDYLSGSVSGSLQA 717 E D++E L E + Q DYL + G LQA Sbjct: 99 ESEESEESDELEEARLVAEELEERQQELDYLKRYLVGRLQA 139 >AF457552-1|AAL68782.1| 311|Anopheles gambiae D7 protein long form protein. Length = 311 Score = 23.8 bits (49), Expect = 5.9 Identities = 13/43 (30%), Positives = 20/43 (46%) Frame = +1 Query: 586 EMVEDAGRSNKDDMETEHLATLERLRQNQRQDYLSGSVSGSLQ 714 E+V D NK D+E E + L DY S ++ S++ Sbjct: 228 EVVRDFNLINKSDLEPEVRSVLASCTGTHAYDYYSCLLNSSVK 270 >AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein protein. Length = 3325 Score = 23.4 bits (48), Expect = 7.9 Identities = 6/11 (54%), Positives = 9/11 (81%) Frame = -1 Query: 625 CHPCCYGQHLQ 593 CHP CY +H++ Sbjct: 1528 CHPYCYRRHMR 1538 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 814,034 Number of Sequences: 2352 Number of extensions: 16852 Number of successful extensions: 42 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 42 length of database: 563,979 effective HSP length: 63 effective length of database: 415,803 effective search space used: 79834176 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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