Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1035
         (351 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   2.1  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   2.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   2.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   3.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   3.7  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   3.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   3.7  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   4.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   8.5  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +1

Query: 157 IVHLELFAHYSNVEFCKI 210
           + HLE+  +Y+ + FC+I
Sbjct: 321 VYHLEIEKYYNILYFCRI 338


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 173 CLLIIAMSNFVRYLIIANFIGN 238
           CL++I   + V+ L   NFI N
Sbjct: 242 CLILITGKSIVQLLTCLNFITN 263



 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 141 CFNFLTNQLNNTENQ 97
           C NF+TN L  +EN+
Sbjct: 257 CLNFITNNL-KSENE 270


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 173 CLLIIAMSNFVRYLIIANFIGN 238
           CL++I   + V+ L   NFI N
Sbjct: 242 CLILITGKSIVQLLTCLNFITN 263



 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 141 CFNFLTNQLNNTENQ 97
           C NF+TN L  +EN+
Sbjct: 257 CLNFITNNL-KSENE 270


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -3

Query: 202 KIRHCYNEQTI 170
           +IRH +NE+T+
Sbjct: 415 QIRHAFNEETV 425


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 116 STIQKTSLQGELYKYVVVSNRE 51
           STIQ+ S  GEL   +  ++ E
Sbjct: 931 STIQEVSKSGELIHKIATNDHE 952


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 138 NTFHDFNSAFGI 173
           NT  DFN  FGI
Sbjct: 191 NTVDDFNDIFGI 202


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +1

Query: 145 FMISIVHLELFAHYSNVEFCKIFDNC*FY 231
           F+I ++  E+  + +N+ F   F    FY
Sbjct: 342 FLIVMIQFEMTQNSTNINFVSTFFKIPFY 370


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +1

Query: 112 VELVGQEIKTHFMISIVHLELFAHYSNVEFCKIF 213
           ++    E KT   +    LEL   ++  E+C++F
Sbjct: 252 IQYTETETKTWGSVFNTVLELMPKHACSEYCRVF 285


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 66  YYILIEFTLQAGFLYC 113
           YY  I FT+   FL C
Sbjct: 117 YYAFIIFTVHLLFLLC 132


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,600
Number of Sequences: 336
Number of extensions: 1221
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)