Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1034
(738 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 135 9e-31
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 133 4e-30
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 132 9e-30
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 108 2e-22
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 107 2e-22
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 105 1e-21
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 104 2e-21
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 95 1e-18
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 91 2e-17
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 90 5e-17
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 89 1e-16
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 77 3e-13
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 76 8e-13
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 76 1e-12
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 63 6e-09
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 56 7e-07
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 56 7e-07
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 56 1e-06
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 54 3e-06
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 49 1e-04
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 49 1e-04
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 48 2e-04
UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyr... 48 2e-04
UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5; Sulfolo... 47 4e-04
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 46 0.001
UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus ... 42 0.016
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 42 0.021
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 41 0.036
UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8; Euryarc... 41 0.036
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 39 0.11
UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 39 0.11
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 39 0.15
UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus ... 38 0.26
UniRef50_Q8ZX25 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 36 0.78
UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1; ... 35 1.8
UniRef50_A7PB79 Cluster: Chromosome chr16 scaffold_10, whole gen... 34 4.2
UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_Q26G27 Cluster: Cytoplasmic aminopeptidase; n=1; Flavob... 33 7.3
UniRef50_A2F5X7 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_A7EB45 Cluster: Predicted protein; n=1; Sclerotinia scl... 33 9.7
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 135 bits (327), Expect = 9e-31
Identities = 60/70 (85%), Positives = 67/70 (95%)
Frame = +2
Query: 56 EWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVD 235
EWKGYV+R++GGNDKQGFPMKQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVD
Sbjct: 44 EWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVD 103
Query: 236 ANLSVLVLLL 265
ANLSVL L++
Sbjct: 104 ANLSVLNLVI 113
Score = 116 bits (278), Expect = 8e-25
Identities = 61/80 (76%), Positives = 68/80 (85%)
Frame = +1
Query: 250 LGLVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGK 429
L LVIV+KG ++IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK
Sbjct: 109 LNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK 167
Query: 430 ENAKPRHKAPKIQRLVTPVV 489
KPR KAPKIQRLVTP V
Sbjct: 168 ---KPRTKAPKIQRLVTPRV 184
Score = 34.3 bits (75), Expect = 3.2
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = +3
Query: 558 EYAKLLAQRKKESKVRRQEEI 620
EYAKLLA+R KE+K +RQE+I
Sbjct: 208 EYAKLLAKRMKEAKEKRQEQI 228
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 133 bits (322), Expect = 4e-30
Identities = 58/70 (82%), Positives = 64/70 (91%)
Frame = +2
Query: 56 EWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVD 235
EWKGYV ++AGGNDKQGFPMKQGVLTN+RVRLL+ KGHSCYRPRR GERKRKSVRGCIVD
Sbjct: 44 EWKGYVFKIAGGNDKQGFPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVD 103
Query: 236 ANLSVLVLLL 265
NLS L L++
Sbjct: 104 QNLSALALIV 113
Score = 121 bits (292), Expect = 2e-26
Identities = 65/123 (52%), Positives = 76/123 (61%)
Frame = +1
Query: 250 LGLVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGK 429
L L++V+KG ++IPGLTD V RRLGPKRAS IRKL+NL+KEDDVR+YVVKR LP K+GK
Sbjct: 109 LALIVVKKGEKDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYVVKRPLPEKDGK 168
Query: 430 ENAKPRHKAPKIQRLVTPVVXXXXXXXXXXXXXXXXXXXXXXXNMLNCLHRERRNPRCVA 609
KPR KAPKIQRL+TPVV + LH RR R
Sbjct: 169 ---KPRTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKILHLRRRQERIRR 225
Query: 610 RKR 618
R R
Sbjct: 226 RSR 228
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 132 bits (319), Expect = 9e-30
Identities = 57/70 (81%), Positives = 64/70 (91%)
Frame = +2
Query: 56 EWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVD 235
EWKGYV R+ GGNDKQGFPMKQG++TN RVRLL+SKGHSCYRPRR GERKRKSVRGCIVD
Sbjct: 44 EWKGYVFRITGGNDKQGFPMKQGIMTNGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVD 103
Query: 236 ANLSVLVLLL 265
+ LSVL L++
Sbjct: 104 SQLSVLSLVI 113
Score = 122 bits (294), Expect = 9e-27
Identities = 59/80 (73%), Positives = 67/80 (83%)
Frame = +1
Query: 250 LGLVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGK 429
L LVIV+KG Q+IPGLTD +PRRLGPKR KIRK+FNLSKEDDVR+YV++R LP KEGK
Sbjct: 109 LSLVIVKKGEQDIPGLTDNTIPRRLGPKRVGKIRKMFNLSKEDDVRQYVIRRPLPEKEGK 168
Query: 430 ENAKPRHKAPKIQRLVTPVV 489
K + KAPKIQRLVTPVV
Sbjct: 169 ---KAKSKAPKIQRLVTPVV 185
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 108 bits (259), Expect = 2e-22
Identities = 47/68 (69%), Positives = 56/68 (82%)
Frame = +2
Query: 56 EWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVD 235
E+KGYVL++ GGNDKQGFPM+QGVL RVR+LM KGH YRPR+DGE KRKS+RGCIV
Sbjct: 44 EYKGYVLKITGGNDKQGFPMRQGVLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVG 103
Query: 236 ANLSVLVL 259
++ VL L
Sbjct: 104 QDIRVLAL 111
Score = 83.4 bits (197), Expect = 5e-15
Identities = 44/80 (55%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
Frame = +1
Query: 250 LGLVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD---VRRYVVKRVLPAK 420
L L +V+KGA EI GLTD NVPRRLGPKR +K+R+LF K D V++ +++R K
Sbjct: 109 LALQVVKKGANEIAGLTDQNVPRRLGPKRLTKLRRLFGFKKADGVAIVQKNLIRRTWTTK 168
Query: 421 EGKENAKPRHKAPKIQRLVT 480
+GK+ R KAPKIQRLVT
Sbjct: 169 DGKK----RQKAPKIQRLVT 184
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 107 bits (258), Expect = 2e-22
Identities = 49/70 (70%), Positives = 56/70 (80%)
Frame = +2
Query: 56 EWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVD 235
E+ GYV R+ GGNDKQGFPM QGVLTN+RVRLL KG CYRPR+ GE++RKSVRGCIV
Sbjct: 85 EFLGYVFRITGGNDKQGFPMMQGVLTNNRVRLLFKKGMKCYRPRKKGEKRRKSVRGCIVG 144
Query: 236 ANLSVLVLLL 265
+LS L L L
Sbjct: 145 QDLSALNLTL 154
Score = 89.8 bits (213), Expect = 6e-17
Identities = 46/77 (59%), Positives = 55/77 (71%)
Frame = +1
Query: 250 LGLVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGK 429
L L +V+KG EIPGLTD V ++LGPKRA+KIRKLFNL K DDVR+YV+ R +
Sbjct: 150 LNLTLVKKGTNEIPGLTDKAVGKKLGPKRATKIRKLFNLDKTDDVRKYVIGRAI-----S 204
Query: 430 ENAKPRHKAPKIQRLVT 480
+N K R PKIQRLVT
Sbjct: 205 KNGKNRFIKPKIQRLVT 221
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 105 bits (252), Expect = 1e-21
Identities = 44/70 (62%), Positives = 56/70 (80%)
Frame = +2
Query: 44 RAAGEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 223
+ G++KGY+ R+ GG DKQGFPMKQGV+T R+RLL+ G SCYRPR+DGERKRK+VRG
Sbjct: 40 KLGGQFKGYLFRIGGGFDKQGFPMKQGVITPRRIRLLLKTGASCYRPRKDGERKRKTVRG 99
Query: 224 CIVDANLSVL 253
CI+ +S L
Sbjct: 100 CIISDEISAL 109
Score = 56.8 bits (131), Expect = 5e-07
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +1
Query: 250 LGLVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLS-KEDDVRRYVVKRVLPAKEG 426
L V+++KG +EI GLT VPRR GPKRAS +R +F ++ + D + V+KR K G
Sbjct: 109 LHCVVLQKGEKEIDGLTTTAVPRRFGPKRASTLRAMFGITDSKFDASKLVLKR--EVKPG 166
Query: 427 KENAKPRHKAPKIQRLVT 480
K +PK+QRL+T
Sbjct: 167 K------FTSPKVQRLIT 178
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 104 bits (250), Expect = 2e-21
Identities = 46/68 (67%), Positives = 55/68 (80%)
Frame = +2
Query: 56 EWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVD 235
E+KGYV ++AGGNDK GFPMKQGV+ RVRLL+S+GHSC+ RR G RKRKSVRGCIV
Sbjct: 44 EFKGYVFKIAGGNDKDGFPMKQGVMVRGRVRLLLSEGHSCFTSRRSGFRKRKSVRGCIVG 103
Query: 236 ANLSVLVL 259
++ VL L
Sbjct: 104 PDMRVLAL 111
Score = 81.0 bits (191), Expect = 3e-14
Identities = 42/81 (51%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
Frame = +1
Query: 250 LGLVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD---VRRYVVKRVLPAK 420
L L IV+KG EI GLT +PR+LGPKRA+ I+KLF L KEDD +++ V++R
Sbjct: 109 LALQIVKKGVAEIDGLTTVTLPRKLGPKRANNIKKLFGLKKEDDPILIKKSVIRRTFKTA 168
Query: 421 EGKENAKPRHKAPKIQRLVTP 483
+GK+ R K PKIQRL+TP
Sbjct: 169 KGKD----RTKCPKIQRLITP 185
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 95.5 bits (227), Expect = 1e-18
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = +2
Query: 56 EWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVD 235
EWKGY LR+AGGNDKQGFPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+
Sbjct: 44 EWKGYQLRIAGGNDKQGFPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVE 102
Query: 236 ANLSVLVLLLCARVP 280
AN+S L L++ + P
Sbjct: 103 ANVSALTLVVLKKNP 117
Score = 34.3 bits (75), Expect = 3.2
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +1
Query: 313 PRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 462
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 119 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 161
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 91.5 bits (217), Expect = 2e-17
Identities = 49/80 (61%), Positives = 59/80 (73%)
Frame = +1
Query: 250 LGLVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGK 429
+ + I + G Q I G+TD PRRLGPKRASKIRKLFNLS+ +DVR+YVV+R + K GK
Sbjct: 112 VNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVRRRV-VKSGK 170
Query: 430 ENAKPRHKAPKIQRLVTPVV 489
K R KAPKIQRL+TP V
Sbjct: 171 ---KDRLKAPKIQRLITPRV 187
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/68 (47%), Positives = 50/68 (73%), Gaps = 2/68 (2%)
Frame = +2
Query: 56 EWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRR--DGERKRKSVRGCI 229
E+KGY+ R+ GG+DK GFPM GVL +SRV LL+ +G + R GER+RK+VRGC+
Sbjct: 45 EFKGYIFRLRGGSDKDGFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCV 104
Query: 230 VDANLSVL 253
+ ++++++
Sbjct: 105 LASDIALV 112
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 90.2 bits (214), Expect = 5e-17
Identities = 39/66 (59%), Positives = 52/66 (78%)
Frame = +2
Query: 56 EWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVD 235
E+KGY+L++ GG DK GFPM GV TN+RVRLL+ + CY+P R+GER+RK+VRG IV
Sbjct: 43 EFKGYILKITGGCDKDGFPMMTGVATNNRVRLLLDGRNGCYKPLRNGERRRKTVRGAIVA 102
Query: 236 ANLSVL 253
++SVL
Sbjct: 103 GDISVL 108
Score = 64.9 bits (151), Expect = 2e-09
Identities = 27/52 (51%), Positives = 41/52 (78%)
Frame = +1
Query: 250 LGLVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKR 405
L ++V+KG EI G+T+ +P R GP+RAS RKLFNLS++DDV+++V++R
Sbjct: 108 LNTIVVKKGEGEIEGVTNDALPMRAGPQRASHFRKLFNLSQKDDVKKFVIRR 159
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 88.6 bits (210), Expect = 1e-16
Identities = 40/70 (57%), Positives = 50/70 (71%)
Frame = +2
Query: 56 EWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVD 235
E+ G R+ GGND QGFPM QGVL + R RLL+ +G CY RR+GERKRKS+RGCIV
Sbjct: 50 EYAGCTFRITGGNDAQGFPMYQGVLKSQRARLLLRQGAKCYLHRRNGERKRKSIRGCIVG 109
Query: 236 ANLSVLVLLL 265
+L L ++L
Sbjct: 110 PDLHALSVVL 119
Score = 57.6 bits (133), Expect = 3e-07
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Frame = +1
Query: 250 LGLVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNL--SKEDDVRRYVVKRV---LP 414
L +V+V G + +PGLTD VP+RL PKRASKIR+LF L +K D + +V + L
Sbjct: 115 LSVVLVDAGDKTLPGLTDVVVPKRLVPKRASKIRRLFGLPTTKVDPKDQMLVCELIKELG 174
Query: 415 AKEGKENAKPRHKAPKIQRLVT 480
+ +N + + K PK+QR+VT
Sbjct: 175 HEVTLKNGEKKLKYPKVQRVVT 196
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 77.4 bits (182), Expect = 3e-13
Identities = 37/70 (52%), Positives = 49/70 (70%)
Frame = +2
Query: 56 EWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVD 235
E++G ++ + GG+D QGFPM G LT RVR L+SKG + YR RR G R+RKSVRG IV
Sbjct: 29 EFEGTIMEITGGDDYQGFPMVSGHLTKKRVRPLLSKGDAGYRCRRKGVRRRKSVRGSIVS 88
Query: 236 ANLSVLVLLL 265
+ VL L++
Sbjct: 89 EEICVLNLII 98
Score = 37.9 bits (84), Expect = 0.26
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = +1
Query: 250 LGLVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAK--E 423
L L+I+R G +EI GLT+ P++ K+RK+F + E+ ++ +L ++ +
Sbjct: 94 LNLIILRPGEKEIDGLTNAVNDVSHLPRKEKKLRKMFGVPDEEKNVVGYIRNILKSECDD 153
Query: 424 GKENAKPRHKAPKIQR 471
K+ K RH +++R
Sbjct: 154 PKKIPKIRHNGKRMKR 169
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 76.2 bits (179), Expect = 8e-13
Identities = 44/79 (55%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Frame = +1
Query: 250 LGLVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKE-G 426
L L +V+KGA EI GLTD NVPRRLGPKR +K+R+LF K D RV+ ++E G
Sbjct: 114 LALQVVKKGANEIAGLTDQNVPRRLGPKRLTKLRRLFGFKKAD--------RVISSEEHG 165
Query: 427 KEN-AKPRHKAPKIQRLVT 480
+ K R KAPKIQRLVT
Sbjct: 166 PQRYGKKRQKAPKIQRLVT 184
Score = 73.7 bits (173), Expect = 4e-12
Identities = 37/61 (60%), Positives = 42/61 (68%)
Frame = +2
Query: 77 RVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLV 256
R GGNDKQG VL RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VL
Sbjct: 62 RFTGGNDKQG------VLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLA 115
Query: 257 L 259
L
Sbjct: 116 L 116
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 75.8 bits (178), Expect = 1e-12
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Frame = +2
Query: 56 EWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYR--PRRDGERKRKSVRGCI 229
EW + + GG DKQGFPMK+G+L+ SRV++L+ KG + R + GER RKSVRGCI
Sbjct: 44 EWDKSIFIITGGQDKQGFPMKEGILSPSRVKILLKKGSTGCRGYKMKKGERCRKSVRGCI 103
Query: 230 VDANLSVLVLLL 265
V +SVL + L
Sbjct: 104 VSPEISVLNIKL 115
Score = 39.5 bits (88), Expect = 0.084
Identities = 24/64 (37%), Positives = 38/64 (59%)
Frame = +1
Query: 295 LTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRL 474
+T+ N + L KR+S +RK+ L+K DD+R++ +K AK+ K KIQRL
Sbjct: 125 ITNKNSEKTLTHKRSSNLRKVLCLTKTDDIRKHYIK---IAKDFKNKV-------KIQRL 174
Query: 475 VTPV 486
+TP+
Sbjct: 175 ITPI 178
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 63.3 bits (147), Expect = 6e-09
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Frame = +1
Query: 280 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD-----VRRYVVKRVLP-AKEGKENAK 441
++IPGLTD PR +GPKRAS+IRKLFNLSKEDD + R + KR+ KE KE K
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDDAAQNSILRKIRKRIYKRMKEAKE--K 137
Query: 442 PRHKAPKIQRL 474
+ + K QRL
Sbjct: 138 RQEQIAKRQRL 148
Score = 62.1 bits (144), Expect = 1e-08
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 56 EWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLM 157
EWKGY++R++GGNDKQGFPMKQ VLT+ R+ LL+
Sbjct: 44 EWKGYMVRISGGNDKQGFPMKQDVLTHDRIHLLL 77
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 56.4 bits (130), Expect = 7e-07
Identities = 25/57 (43%), Positives = 38/57 (66%)
Frame = +2
Query: 74 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 244
L++ GG DK GFPM+ V RV++L+S+G +RPR GER++K+V G + N+
Sbjct: 61 LKITGGTDKDGFPMRPDVHGPRRVKILLSRGPG-FRPRERGERRKKTVHGNTISPNI 116
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 56.4 bits (130), Expect = 7e-07
Identities = 27/62 (43%), Positives = 42/62 (67%)
Frame = +2
Query: 62 KGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDAN 241
KGY LR+ GG+DK GFPMK+ V R + L++ G + ++P + G R+RK+VRG + +
Sbjct: 43 KGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVN-GGTGFKPTKKGLRRRKTVRGNTIADD 101
Query: 242 LS 247
+S
Sbjct: 102 IS 103
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = +2
Query: 74 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 223
L + GG DK GFPM+ + RVR+L+SKG +RP+ GER++K+VRG
Sbjct: 61 LEIRGGTDKDGFPMRPDIHGPRRVRVLLSKGPG-FRPKEKGERRKKTVRG 109
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 54.4 bits (125), Expect = 3e-06
Identities = 25/59 (42%), Positives = 38/59 (64%)
Frame = +2
Query: 68 YVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 244
Y L++ GG D+ GFPM+ + +R RLL+S G +RP+ G RKRK VRG ++ ++
Sbjct: 48 YELKITGGTDRDGFPMRPDLPGTARRRLLLSGGVG-FRPKEKGLRKRKGVRGRVISKDI 105
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/53 (45%), Positives = 33/53 (62%)
Frame = +2
Query: 65 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 223
GY L + GG+D GFPM + + R+L+S G + PR GER+RK+VRG
Sbjct: 146 GYKLLIRGGSDNSGFPMLPSIPGPVKKRVLLS-GPPGFHPREKGERRRKTVRG 197
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/61 (39%), Positives = 37/61 (60%)
Frame = +2
Query: 62 KGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDAN 241
KG L + GG+D+ GFPM+ + + R L+S G + PR GER+RK+VRG + +
Sbjct: 167 KGLQLEIRGGSDESGFPMRPDIPGPVKKRALLS-GPPGFWPREKGERRRKTVRGNTISED 225
Query: 242 L 244
+
Sbjct: 226 I 226
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/66 (31%), Positives = 42/66 (63%)
Frame = +2
Query: 56 EWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVD 235
E +GY L++ GG+D+ GF M+ + ++R+L+ +G Y + G R+RKS+RG +
Sbjct: 40 ELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLKEGPG-YNVKEKGLRRRKSLRGNTIS 98
Query: 236 ANLSVL 253
+++++
Sbjct: 99 KDITLI 104
>UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S6e - Aeropyrum pernix
Length = 235
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +2
Query: 65 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV 232
G ++ GG D G PM GV + R ++L++ G + PR GER+RKSVRG ++
Sbjct: 155 GLKFKIRGGTDATGIPMHPGVPGSGRYKVLLA-GPPGFHPRERGERRRKSVRGRMI 209
>UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S6e -
Sulfolobus solfataricus
Length = 214
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/50 (40%), Positives = 35/50 (70%)
Frame = +2
Query: 74 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 223
L++ GG+D GFPM+ V+ ++ ++L+S G + P +GER+RK++RG
Sbjct: 150 LKITGGSDNSGFPMRFDVIGAAKRKILLS-GPPGFYPNENGERRRKTIRG 198
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/53 (39%), Positives = 34/53 (64%)
Frame = +2
Query: 65 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 223
GY + + GG+D G PM++ V + + +L+ +G + + P DGERKR +VRG
Sbjct: 47 GYTVEITGGSDDAGRPMREDVDGSDLMEVLL-EGGAGFNPDEDGERKRVTVRG 98
>UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S6e -
Methanoregula boonei (strain 6A8)
Length = 143
Score = 41.9 bits (94), Expect = 0.016
Identities = 19/52 (36%), Positives = 33/52 (63%)
Frame = +2
Query: 65 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVR 220
GY + + GG+D+ G P ++ + R +LL+++G + P +GERKRK +R
Sbjct: 47 GYKILITGGSDQTGTPARKSLPGAGRRKLLLAEGVG-FHPVMEGERKRKMIR 97
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 41.5 bits (93), Expect = 0.021
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = -3
Query: 211 FTFSLSIAARSVT*VAL*HQKTNTAVCQDALFHRESLLVVAASDTKYIALPF 56
FT + ++AA + AL H++ +T V Q AL H E+LLVV D + ++LPF
Sbjct: 161 FTLASAVAAEAAR--ALGHEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPF 210
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 40.7 bits (91), Expect = 0.036
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = +2
Query: 140 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLVLLLCARVP 280
R+RLL K HSC+ PR + RK K+VR V+AN+S L L++ + P
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNP 64
Score = 34.3 bits (75), Expect = 3.2
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +1
Query: 313 PRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 462
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 66 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 108
>UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 136
Score = 40.7 bits (91), Expect = 0.036
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +2
Query: 65 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 223
GY +++ GG D GF MK + R R+L + G Y P+ G+R+RK +RG
Sbjct: 47 GYKVQITGGCDGSGFVMKPDLPGPRRQRILTATGVG-YVPKLPGQRRRKMMRG 98
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 39.1 bits (87), Expect = 0.11
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Frame = +2
Query: 80 VAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRP--RRDGERKRKSVRGCIVDANLSVL 253
+ GG+DKQGF +K+ + T R+++ + KG R +R K+++VRG I+ + +S +
Sbjct: 51 INGGHDKQGFLLKKNLNTFERLKINVKKGSLGNRSHFKRKNLTKKRTVRGGILSSEISSI 110
Query: 254 VLL 262
L+
Sbjct: 111 NLV 113
>UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5;
Thermoplasmatales|Rep: 30S ribosomal protein S6e -
Thermoplasma volcanium
Length = 128
Score = 39.1 bits (87), Expect = 0.11
Identities = 21/65 (32%), Positives = 40/65 (61%)
Frame = +2
Query: 65 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 244
GY +++ GG+ GF M+ + T + ++L+ K S YR ++G RKR + RG I+ +++
Sbjct: 47 GYKMKITGGSSVDGFAMRPDLQTQGKKQILV-KYTSGYR-GKNGIRKRITARGSIIGSDI 104
Query: 245 SVLVL 259
+ + L
Sbjct: 105 TQINL 109
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 38.7 bits (86), Expect = 0.15
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +2
Query: 74 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 223
+R+ GG+DK G PM+ V +R +L+S+G R G R RK VRG
Sbjct: 54 IRITGGSDKSGVPMRPDVHGPARKYVLLSRGVG-LRDAERGGRTRKLVRG 102
>UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S6e
- Candidatus Nitrosopumilus maritimus SCM1
Length = 137
Score = 37.9 bits (84), Expect = 0.26
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +2
Query: 74 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 244
L++ GG+DK G PM+ + +R +L+SKG + G+R RK +RG V +
Sbjct: 48 LKLTGGSDKSGVPMRNDIHGAARKYVLLSKGVG-LQDAEKGQRVRKLMRGNTVSEEI 103
>UniRef50_Q8ZX25 Cluster: 30S ribosomal protein S6e; n=5;
Thermoproteaceae|Rep: 30S ribosomal protein S6e -
Pyrobaculum aerophilum
Length = 148
Score = 36.3 bits (80), Expect = 0.78
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +2
Query: 62 KGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 223
KG +R+ GG+ +G PM GV + + +++ G Y P + G +K+K VRG
Sbjct: 51 KGAKIRITGGSGIEGAPMHPGVPGPVK-KYILADGPPGYWPPKKGMKKKKLVRG 103
>UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1;
Xylella fastidiosa Temecula1|Rep: Putative
uncharacterized protein - Xylella fastidiosa (strain
Temecula1 / ATCC 700964)
Length = 109
Score = 35.1 bits (77), Expect = 1.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 64 GLCTSCRWRQRQARIPDETGRPDKQPCSSSDVKG 165
G C RWR ++ + DE G + PC+ DV+G
Sbjct: 17 GACCMARWRCQEINVTDEVGYGMRLPCTPHDVRG 50
>UniRef50_A7PB79 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 290
Score = 33.9 bits (74), Expect = 4.2
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -1
Query: 312 YISISQSRNFLGTLAHNNKTKTER-LASTIHPRTDLRFLSPSR 187
++ + Q + + TL H N+ + +R L+ T+HPRT R SP R
Sbjct: 124 FLYVGQPKKIVLTLPHYNQVQNKRGLSMTMHPRTVFRLPSPLR 166
>UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Putative
uncharacterized protein - Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 541
Score = 33.5 bits (73), Expect = 5.5
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +1
Query: 256 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV 396
L+ V +EI LT GNVP+ + R ++RK NLS EDD+ Y+
Sbjct: 494 LLRVNLSTKEISMLT-GNVPKTINMNRY-RLRKSLNLSSEDDLTDYL 538
>UniRef50_Q26G27 Cluster: Cytoplasmic aminopeptidase; n=1;
Flavobacteria bacterium BBFL7|Rep: Cytoplasmic
aminopeptidase - Flavobacteria bacterium BBFL7
Length = 224
Score = 33.1 bits (72), Expect = 7.3
Identities = 22/81 (27%), Positives = 36/81 (44%)
Frame = -1
Query: 396 DITTYIIFFAKVEQLTDFGSTFGT*TAGYISISQSRNFLGTLAHNNKTKTERLASTIHPR 217
D+T + V++ T++G FG AG++ +G H N ++E + IHP
Sbjct: 135 DLTGAAFYDYCVQKATEYGWEFGGPIAGHL--------IGHFPHEN-LESENKLNYIHPE 185
Query: 216 TDLRFLSPSRRGL*HEWPFDI 154
D +P G EW +I
Sbjct: 186 NDKNLFAPDGNGNKREWILEI 206
>UniRef50_A2F5X7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1146
Score = 32.7 bits (71), Expect = 9.7
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 301 DGNVPRRLGPKRASKIRK-LFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQR 471
D + + PK+ S +K + + S EDD K++L + + E KPR K+P+ +R
Sbjct: 1012 DSSDEEEIKPKQKSPQKKPILSSSSEDDAIPPPKKKLLDSSDDDEEIKPRQKSPQKKR 1069
>UniRef50_A7EB45 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 700
Score = 32.7 bits (71), Expect = 9.7
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 332 NVLPKSVSCSTLAKKMMYVVMSSNACSQPRKEK 430
+V+P+S + S L++ M+ SN S+PRKEK
Sbjct: 69 SVMPESRNSSLLSQSAMFATQVSNRISEPRKEK 101
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,817,531
Number of Sequences: 1657284
Number of extensions: 13780808
Number of successful extensions: 38632
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 37312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38599
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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