Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1033
         (736 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB6D20 Cluster: PREDICTED: similar to CG10703-PA...    51   3e-05
UniRef50_UPI00015B5110 Cluster: PREDICTED: similar to GA10509-PA...    50   6e-05
UniRef50_Q9VGR1 Cluster: CG10703-PA; n=3; Sophophora|Rep: CG1070...    49   1e-04
UniRef50_Q0IEG6 Cluster: GRIP and coiled-coil domain-containing ...    39   0.15 
UniRef50_Q7PQE0 Cluster: ENSANGP00000018104; n=1; Anopheles gamb...    36   1.0  
UniRef50_Q5KPN1 Cluster: Peroxisome organization and biogenesis-...    33   5.5  
UniRef50_Q010S8 Cluster: Fas-associated factor 1-like protein; n...    33   7.3  
UniRef50_Q7KW17 Cluster: CG14622-PC, isoform C; n=10; Coelomata|...    33   7.3  
UniRef50_Q1NGC6 Cluster: Putative chemotaxis protein; n=1; Sphin...    33   9.6  
UniRef50_A3YIL4 Cluster: Mu-like prophage I protein, putative; n...    33   9.6  

>UniRef50_UPI0000DB6D20 Cluster: PREDICTED: similar to CG10703-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG10703-PA - Apis mellifera
          Length = 499

 Score = 51.2 bits (117), Expect = 3e-05
 Identities = 26/58 (44%), Positives = 36/58 (62%)
 Frame = +1

Query: 82  VETPAQLVRLQQKLALIEQSHSVAIREEQIKAKRAEESARKICARQEERVALLEGKLA 255
           +ETP  L+ LQ K+ L+++ H  AI EEQ +   AE+ AR +    E RVA LE +LA
Sbjct: 154 IETPPILLSLQSKMVLMKKQHLNAIHEEQKRTAAAEQQARALAMTHEARVAGLEARLA 211


>UniRef50_UPI00015B5110 Cluster: PREDICTED: similar to GA10509-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA10509-PA - Nasonia vitripennis
          Length = 633

 Score = 50.0 bits (114), Expect = 6e-05
 Identities = 25/57 (43%), Positives = 37/57 (64%)
 Frame = +1

Query: 85  ETPAQLVRLQQKLALIEQSHSVAIREEQIKAKRAEESARKICARQEERVALLEGKLA 255
           ETP  L+ LQ +++ +++ H  AI EEQ +A  AE+ A+ + A  E RVA LE +LA
Sbjct: 200 ETPVMLLNLQSEMSSMKKKHRNAILEEQRRAALAEQEAKALAASHEARVAGLEARLA 256


>UniRef50_Q9VGR1 Cluster: CG10703-PA; n=3; Sophophora|Rep:
           CG10703-PA - Drosophila melanogaster (Fruit fly)
          Length = 695

 Score = 48.8 bits (111), Expect = 1e-04
 Identities = 23/59 (38%), Positives = 41/59 (69%)
 Frame = +1

Query: 79  TVETPAQLVRLQQKLALIEQSHSVAIREEQIKAKRAEESARKICARQEERVALLEGKLA 255
           + ++ A L +++ ++  +++ H+VAIR+EQ +  RAEE +R+  A  E+RVA LE +LA
Sbjct: 250 SADSAALLQQVRLEMQQLKEQHAVAIRQEQRRVLRAEEQSRRQAALHEDRVASLEARLA 308


>UniRef50_Q0IEG6 Cluster: GRIP and coiled-coil domain-containing
           protein 1 , putative; n=1; Aedes aegypti|Rep: GRIP and
           coiled-coil domain-containing protein 1 , putative -
           Aedes aegypti (Yellowfever mosquito)
          Length = 663

 Score = 38.7 bits (86), Expect = 0.15
 Identities = 20/52 (38%), Positives = 33/52 (63%)
 Frame = +1

Query: 100 LVRLQQKLALIEQSHSVAIREEQIKAKRAEESARKICARQEERVALLEGKLA 255
           L + Q ++  +++ H+ AIR EQ +   AE+ ++K+    EERVA LE +LA
Sbjct: 228 LQQFQGEIENLKRQHAAAIRNEQRRVLVAEDRSKKLEEVHEERVANLEARLA 279


>UniRef50_Q7PQE0 Cluster: ENSANGP00000018104; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000018104 - Anopheles gambiae
           str. PEST
          Length = 657

 Score = 35.9 bits (79), Expect = 1.0
 Identities = 15/58 (25%), Positives = 36/58 (62%)
 Frame = +1

Query: 79  TVETPAQLVRLQQKLALIEQSHSVAIREEQIKAKRAEESARKICARQEERVALLEGKL 252
           ++     L  LQ ++  +++ +++A+ EE+ + + AEE+++++    EERVA  E ++
Sbjct: 232 SINLKESLRELQDEMNHLKKQYAIAVAEEKQRVRLAEENSKRLREIHEERVANFESRI 289


>UniRef50_Q5KPN1 Cluster: Peroxisome organization and
           biogenesis-related protein, putative; n=2;
           Filobasidiella neoformans|Rep: Peroxisome organization
           and biogenesis-related protein, putative - Cryptococcus
           neoformans (Filobasidiella neoformans)
          Length = 249

 Score = 33.5 bits (73), Expect = 5.5
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
 Frame = +1

Query: 82  VETPAQLVRLQQKLALIEQSHSVAIREEQIKAKRAEESARKICARQEE-RVALLEGKLAN 258
           V + A LVRL+        S  VA +EE+ + +  EE+AR++  R+E  R  L + +   
Sbjct: 157 VSSSASLVRLRADSRRFALSSQVA-KEEEKEGRSGEEAARQMAERRERGRALLAQRQSIL 215

Query: 259 SQRL*DSTI*GDAATNS*YSNL 324
           SQ + DS      AT   Y+NL
Sbjct: 216 SQLVSDSLDVWIPATGLGYTNL 237


>UniRef50_Q010S8 Cluster: Fas-associated factor 1-like protein; n=2;
           Ostreococcus|Rep: Fas-associated factor 1-like protein -
           Ostreococcus tauri
          Length = 496

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = +1

Query: 103 VRLQQKLALIEQSHSVAIREEQIKAKRAEESARKICARQEERVA 234
           +R +Q+ A  E     A RE +++AKRA+E A      +EER+A
Sbjct: 336 LREEQEAAFAESLARDAAREREVEAKRAQEEAECARVAEEERLA 379


>UniRef50_Q7KW17 Cluster: CG14622-PC, isoform C; n=10; Coelomata|Rep:
            CG14622-PC, isoform C - Drosophila melanogaster (Fruit
            fly)
          Length = 1455

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
 Frame = +1

Query: 1    ELEKRVRDLSSSXXXXXXXXXXXXXXTVETPAQLVRLQQKLALIEQSHSVAIREEQIKAK 180
            ELE+   D+ S                 +    L R++++L      HS A++  Q    
Sbjct: 783  ELERENFDVQSRLAKKEQELDLRMQEKEDLETGLARMRERLEKESAQHSQAVQRAQTAEM 842

Query: 181  RAEESARKICARQEERVAL----LEGKLANSQRL 270
            RAE+   ++ + Q+ER  L     EG + + Q++
Sbjct: 843  RAEDLQHRLISEQQERARLERLVTEGSIPDDQKV 876


>UniRef50_Q1NGC6 Cluster: Putative chemotaxis protein; n=1;
           Sphingomonas sp. SKA58|Rep: Putative chemotaxis protein
           - Sphingomonas sp. SKA58
          Length = 510

 Score = 32.7 bits (71), Expect = 9.6
 Identities = 14/35 (40%), Positives = 24/35 (68%)
 Frame = +1

Query: 139 SHSVAIREEQIKAKRAEESARKICARQEERVALLE 243
           SH  A+RE+ ++A+R +E AR    R+ E +AL++
Sbjct: 204 SHEAALREDAMRAEREQERARLTTERRAETLALVK 238


>UniRef50_A3YIL4 Cluster: Mu-like prophage I protein, putative; n=3;
           Campylobacter jejuni|Rep: Mu-like prophage I protein,
           putative - Campylobacter jejuni subsp. jejuni CF93-6
          Length = 271

 Score = 32.7 bits (71), Expect = 9.6
 Identities = 19/51 (37%), Positives = 33/51 (64%)
 Frame = +1

Query: 115 QKLALIEQSHSVAIREEQIKAKRAEESARKICARQEERVALLEGKLANSQR 267
           Q +AL  ++ S+A++ E +K K+ EES + + +   +  AL  GK+ANSQ+
Sbjct: 170 QIIALKNENSSLALQNEALK-KQNEESVKNLASSLVDN-ALNSGKIANSQK 218


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,684,482
Number of Sequences: 1657284
Number of extensions: 10026755
Number of successful extensions: 37610
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 35454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37565
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)