Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1033
         (736 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    23   2.6  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   4.5  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   5.9  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   7.8  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    21   7.8  

>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -1

Query: 577 ILPALEMNVTEPFDLEHGGDVYGEP 503
           ++P   + +   +DL H  D+Y +P
Sbjct: 80  LIPKDTITIIHIYDLHHNPDIYPDP 104


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 574 LPALEMNVTEPFDLEHGGDVYGEPCLSFSDIN 479
           L  L+++      L HGG +    CLS+ D++
Sbjct: 371 LSELDLSWNSISSLSHGGQLARFKCLSWLDLS 402


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/17 (58%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
 Frame = -3

Query: 191 SSALFAFIC-SSLIATE 144
           +SALFAFIC   L++ E
Sbjct: 4   TSALFAFICIQGLVSAE 20


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 341 PIYRISKLLYQLLVAASPQIVLSYS 267
           P++ I  LLY L    +P I L+++
Sbjct: 299 PVFVILTLLYSLNSCVNPWIYLAFN 323


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 574 LPALEMNVTEPFDLEHGGDVYGEP 503
           LP   +     +DL H  D+Y +P
Sbjct: 98  LPKSTITHLHIYDLHHNPDIYPDP 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,171
Number of Sequences: 336
Number of extensions: 2337
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)