Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1033
         (736 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   5.6  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   5.6  
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    23   7.4  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   9.8  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   9.8  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -1

Query: 367  AGAIFSSSLPFIESLSCCISCWSR 296
            +G++ ++ +P I+  S  +SCW R
Sbjct: 1369 SGSVSATLMPKIQFSSLIVSCWLR 1392


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -1

Query: 367  AGAIFSSSLPFIESLSCCISCWSR 296
            +G++ ++ +P I+  S  +SCW R
Sbjct: 1370 SGSVSATLMPKIQFSSLIVSCWLR 1393


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 29  AVPWRQPKGGCSVPKPGLL 85
           A+ WRQP GG S    G L
Sbjct: 149 AIGWRQPNGGYSFDCGGSL 167


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = -1

Query: 538 DLEHGGDVYGEPCLSFSDINSFFRMCILSIN 446
           D+E GG+ + +P ++   ++S F +  L +N
Sbjct: 135 DVEEGGNRWSKPHVATLSLHSLFELRSLLLN 165


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 178 KRAEESARKICARQEERVALLEGKLANSQRL 270
           +R +E  RK+  RQ+    L +  L N Q+L
Sbjct: 737 ERLQEMTRKLHQRQQHMKKLQQELLTNEQQL 767


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,325
Number of Sequences: 2352
Number of extensions: 9615
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)