Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1030
         (393 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   4.0  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    22   9.2  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   9.2  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 155 LLNLVLDNTTEFLRDPDDP 211
           L  L+L+   EFL DP+ P
Sbjct: 503 LERLILNRLHEFLEDPESP 521


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = -1

Query: 117 PPANFTRMLFSKYLLRSNIDSFLLFSLLSPVTWLPFDF 4
           PP     + +S YL   N D F   ++  P   +P DF
Sbjct: 250 PPYGLPTVAWSSYLDVRNRDDFRQLNVSFPFGPVPDDF 287


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +2

Query: 32   DNKEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDP 154
            D+ + +RK S   LS   + S   + +GG E+ GIL    P
Sbjct: 1450 DSIQSKRKVS--SLSDRSDNSEPGQISGGEESPGILSDDQP 1488


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 365,238
Number of Sequences: 2352
Number of extensions: 6667
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30784536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)