Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1028
(299 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 24 0.40
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 20 5.0
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 20 5.0
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 20 5.0
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 20 5.0
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 20 5.0
DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory pro... 20 5.0
DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory pro... 20 5.0
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 20 6.6
DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory pro... 19 8.7
DQ855499-1|ABH88186.1| 124|Tribolium castaneum chemosensory pro... 19 8.7
AM292349-1|CAL23161.1| 248|Tribolium castaneum gustatory recept... 19 8.7
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 23.8 bits (49), Expect = 0.40
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 228 GQVRSCPRCHHYIXESVLN 284
G ++SCP H + E VLN
Sbjct: 351 GNLQSCPTRSHAVWEMVLN 369
Score = 19.4 bits (38), Expect = 8.7
Identities = 6/15 (40%), Positives = 8/15 (53%)
Frame = -3
Query: 117 VWPSRVQVRWPWICH 73
+WP + R P CH
Sbjct: 336 LWPYTMYFRMPHRCH 350
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 20.2 bits (40), Expect = 5.0
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -2
Query: 148 QNPGIN*SPRSLALKSTGSMAVDMP 74
QNPG+N +P + ++ +D P
Sbjct: 192 QNPGLNLNPPVTQTQLPLNLGLDFP 216
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 20.2 bits (40), Expect = 5.0
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +3
Query: 228 GQVRSCPRCHHYIXESVLN 284
G +CP H + E V+N
Sbjct: 343 GNAHNCPSRSHPVWEIVMN 361
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 20.2 bits (40), Expect = 5.0
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +3
Query: 228 GQVRSCPRCHHYIXESVLN 284
G +CP H + E V+N
Sbjct: 350 GNAHNCPSRSHPVWEIVMN 368
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 20.2 bits (40), Expect = 5.0
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 67 AIVAYPRPSNLYS*GPDCEEIN 132
A+ RP +LY P C ++N
Sbjct: 349 AVCVNERPWSLYCGEPPCGQLN 370
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 20.2 bits (40), Expect = 5.0
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -3
Query: 84 WICHDGWPRL 55
W C G+PRL
Sbjct: 174 WQCQGGYPRL 183
>DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory
protein 16 protein.
Length = 126
Score = 20.2 bits (40), Expect = 5.0
Identities = 9/43 (20%), Positives = 14/43 (32%)
Frame = +3
Query: 171 LGTXGCXXPSXQWRPSXDPGQVRSCPRCHHYIXESVLNADHHV 299
LG C + + C +C+ E V HH+
Sbjct: 48 LGKGKCTPEGEELKKDIPEALQNGCAKCNEKHKEGVRKVIHHL 90
>DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory
protein 9 protein.
Length = 126
Score = 20.2 bits (40), Expect = 5.0
Identities = 9/43 (20%), Positives = 14/43 (32%)
Frame = +3
Query: 171 LGTXGCXXPSXQWRPSXDPGQVRSCPRCHHYIXESVLNADHHV 299
LG C + + C +C+ E V HH+
Sbjct: 48 LGKGKCTPEGEELKKDIPEALQNGCAKCNEKHKEGVRKVIHHL 90
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 19.8 bits (39), Expect = 6.6
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +3
Query: 39 RLRRQITSAS 68
RLR+QITSA+
Sbjct: 274 RLRKQITSAA 283
>DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory
protein 14 protein.
Length = 126
Score = 19.4 bits (38), Expect = 8.7
Identities = 9/43 (20%), Positives = 14/43 (32%)
Frame = +3
Query: 171 LGTXGCXXPSXQWRPSXDPGQVRSCPRCHHYIXESVLNADHHV 299
LG C + + C +C+ E V HH+
Sbjct: 48 LGKGKCTPEGEELKRDIPEALQNECAKCNEKHKEGVRKVLHHL 90
>DQ855499-1|ABH88186.1| 124|Tribolium castaneum chemosensory
protein 13 protein.
Length = 124
Score = 19.4 bits (38), Expect = 8.7
Identities = 8/43 (18%), Positives = 15/43 (34%)
Frame = +3
Query: 171 LGTXGCXXPSXQWRPSXDPGQVRSCPRCHHYIXESVLNADHHV 299
LGT C + + C +C+ E + H++
Sbjct: 46 LGTGKCTPSGEELKKDIPDALKNECAKCNDKHKEGIRKVIHYL 88
>AM292349-1|CAL23161.1| 248|Tribolium castaneum gustatory
receptor candidate 28 protein.
Length = 248
Score = 19.4 bits (38), Expect = 8.7
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = +1
Query: 67 AIVAYPRPS 93
A++AYP+PS
Sbjct: 20 AVLAYPQPS 28
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,179
Number of Sequences: 336
Number of extensions: 1102
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used: 5429307
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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