BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1027 (770 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_01_0682 - 5575297-5575308,5575391-5575516,5575779-5575885,557... 31 1.0 02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 30 1.8 01_06_1331 + 36373059-36373338,36374190-36374263,36374530-363746... 29 3.1 12_02_1270 + 27466516-27466621,27466722-27466885,27467385-274681... 29 5.4 05_07_0045 - 27304696-27305299,27305392-27305521,27305625-27305760 29 5.4 12_02_0754 - 22817277-22817657,22817796-22817927,22818026-228182... 28 7.2 10_01_0222 - 2387703-2387744,2387797-2388119,2388170-2388251 28 7.2 05_04_0302 - 20004802-20005360,20005412-20005623 28 7.2 02_02_0403 - 9866122-9867231 28 7.2 08_01_0349 - 3082700-3083407 28 9.5 06_02_0148 - 12280794-12280962,12281102-12281210,12281283-122813... 28 9.5 01_07_0298 - 42586007-42589742,42590167-42590280,42590295-425904... 28 9.5 >11_01_0682 - 5575297-5575308,5575391-5575516,5575779-5575885, 5575911-5576013,5576122-5576187,5576378-5576461, 5577448-5577522,5577615-5577668,5577752-5577895, 5578632-5578685,5578877-5578981,5579076-5579173, 5579660-5579729,5580444-5580566,5580647-5580727, 5580996-5581476,5581684-5581816,5582550-5582598, 5582704-5582892,5583642-5583703,5583762-5585316 Length = 1256 Score = 31.1 bits (67), Expect = 1.0 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = -3 Query: 351 SCEKFVFVHDLALGDSGHRERHSLGRFNVLAHRFNVITSRDIRWTSVT 208 S EK +A+ DSGHR R S N + I + I W VT Sbjct: 740 SVEKLGRSRSVAISDSGHRSRQSTADSNEPSGDSQPIADQPIEWVKVT 787 >02_05_1147 - 34447519-34448042,34448126-34449092,34449458-34449657, 34449867-34450051,34450130-34450228,34450316-34450357, 34450516-34450860,34450956-34451101,34451213-34451296, 34451424-34451502,34451596-34451675,34451824-34451875, 34451992-34452026 Length = 945 Score = 30.3 bits (65), Expect = 1.8 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +3 Query: 570 DVQYLASLGKSQTANVKRDADVGVALANRDAGIREAECEKNAMDVKY 710 D QY+ S G+ Q +NV+R + V+L N I+E + A KY Sbjct: 114 DFQYIDSSGRDQGSNVRRKSQSLVSLVNDKERIQEVRQKALATRDKY 160 >01_06_1331 + 36373059-36373338,36374190-36374263,36374530-36374699, 36374731-36374822,36375087-36375323,36375922-36375980, 36376462-36376644,36377347-36377437,36377959-36378002, 36378085-36378207 Length = 450 Score = 29.5 bits (63), Expect = 3.1 Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 2/55 (3%) Frame = +2 Query: 44 VVKCSVCIVKVTVKGFKMGNIHTVGPNEAL--IVSGGCFGPTTKRTIVGGWAWAW 202 VV + +V K + GN TV P + SG GP+ R + W W + Sbjct: 161 VVMITAYLVSFVPKKYNKGNSITVSPRSQVSRTSSGAASGPSESRDLGQVWGWGY 215 >12_02_1270 + 27466516-27466621,27466722-27466885,27467385-27468173, 27468263-27468479,27469078-27469256,27470233-27470474, 27470607-27470994 Length = 694 Score = 28.7 bits (61), Expect = 5.4 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -3 Query: 156 PKQPPETISASLGPTVWMLPILNPFTVTF 70 PK P T + L P VW L + NP+ +F Sbjct: 442 PKDNPYTDDSDLEPEVWALGLRNPWRCSF 470 >05_07_0045 - 27304696-27305299,27305392-27305521,27305625-27305760 Length = 289 Score = 28.7 bits (61), Expect = 5.4 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = -2 Query: 658 SRLARATPTSASLFTLAVCDFPKLARYWTSS 566 S A A P S + L+ C FP +A W +S Sbjct: 244 SGFAGAAPDSKATLELSACYFPNMAEMWAAS 274 >12_02_0754 - 22817277-22817657,22817796-22817927,22818026-22818272, 22818473-22818909 Length = 398 Score = 28.3 bits (60), Expect = 7.2 Identities = 10/34 (29%), Positives = 19/34 (55%) Frame = +2 Query: 32 VIVLVVKCSVCIVKVTVKGFKMGNIHTVGPNEAL 133 V++ +KC C+ K+ + F GN+ + N +L Sbjct: 255 VVIDFIKCFPCVEKLYIVAFNQGNLKNIRRNVSL 288 >10_01_0222 - 2387703-2387744,2387797-2388119,2388170-2388251 Length = 148 Score = 28.3 bits (60), Expect = 7.2 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = +3 Query: 519 GRMGIEILSFTIKDVYDDVQYLASLGKSQTANVKRDADVGVAL 647 G MG I F+IKD+Y+D + + S ++ D ++ V L Sbjct: 10 GMMGPIIKVFSIKDIYEDAKSIISPSSYSDSDSNSDDEMEVVL 52 >05_04_0302 - 20004802-20005360,20005412-20005623 Length = 256 Score = 28.3 bits (60), Expect = 7.2 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = -3 Query: 648 PERHRRQRPSSRWPSATSPSW 586 P+R R RPSSRW S SW Sbjct: 72 PQRLDRDRPSSRWRWRYSSSW 92 >02_02_0403 - 9866122-9867231 Length = 369 Score = 28.3 bits (60), Expect = 7.2 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = +1 Query: 379 VKEIKMTVLQTLEGHLRAILGTLTVEEVYKDRDQFAGLVREVAGRTSEEWESRF 540 V E T L+ L L A+L E+V D +FAG+VR W+ RF Sbjct: 201 VVECTCTALRRLVAELDAVLWKPMYEDVV-DARRFAGVVRADDESPEMSWKERF 253 >08_01_0349 - 3082700-3083407 Length = 235 Score = 27.9 bits (59), Expect = 9.5 Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = -1 Query: 695 CVFLTFRFPNTSISV-SQSDTDVSVPLHVGRLRLPQAGQILDIVVDVLNR 549 C L F SI S + V+VPLH R R + G +D V LNR Sbjct: 116 CFLLAFLLNVQSIRYYSHTGLLVNVPLHAHRHRRRRPGLAVDYVTATLNR 165 >06_02_0148 - 12280794-12280962,12281102-12281210,12281283-12281385, 12281587-12281618,12281709-12281926,12282035-12282150, 12282428-12282683,12282912-12282999,12283393-12283468, 12283562-12283620,12285236-12285305,12285399-12285539 Length = 478 Score = 27.9 bits (59), Expect = 9.5 Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Frame = +3 Query: 420 SFASYSRNSYSRRGVQRQGPIRGLGTRSGWPDVGRMGIEILSFTIKDVYDD-VQYLASLG 596 S SYS +S + V+R G G S W + GIE L K Y++ Y+ G Sbjct: 328 SHKSYSTDSLTNERVERNGTDIGPKAGSSWLYIYPKGIEELLLYTKRTYNNPTIYITENG 387 Query: 597 KSQTAN 614 + N Sbjct: 388 VDEVNN 393 >01_07_0298 - 42586007-42589742,42590167-42590280,42590295-42590437, 42591174-42591347 Length = 1388 Score = 27.9 bits (59), Expect = 9.5 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%) Frame = +2 Query: 44 VVKCSVCIVKVTVKGFKMGNIHTVGPNEALIVSGGCFGPTTKRTIVGGWAWAWCLVTDVQ 223 V+ C C+V V + N + P + LI G P+ K +VGG VTDV Sbjct: 1167 VIYCLRCLVDVDIPL----NQGCLAPVKILIPKGSFLSPSDKAAVVGGNVLTSQRVTDVV 1222 Query: 224 RISLEVMTLNR-CASTL 271 ++ + ++ C + L Sbjct: 1223 LMAFQACACSQGCMNNL 1239 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,716,101 Number of Sequences: 37544 Number of extensions: 572159 Number of successful extensions: 2028 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1927 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2028 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 2075009728 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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