Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1027
         (770 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    25   2.6  
AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismuta...    24   4.5  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   4.5  
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    24   6.0  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   6.0  
AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.         24   6.0  
AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.         24   6.0  
AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.         24   6.0  
AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.         23   7.9  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   7.9  

>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 32  VIVLVVKCSVCIVKVTVKGFKMG 100
           V+++   CS+C  + TVK +  G
Sbjct: 135 VLIVAAGCSICAAQTTVKRYPTG 157


>AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismutase
           1 protein.
          Length = 206

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -1

Query: 557 LNREGQNLDSHSSDVRPATSRTKPANWSLSLYTSST 450
           LNR+ QN+++   +++ A    + + W+   Y   T
Sbjct: 128 LNRDFQNMENFKKEMKAAAVAVQGSGWAWLGYNKKT 163


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -1

Query: 524 SSDVRPATSRTKPANWSLSLYTSSTVRVPRIAR 426
           S   R  +  T+P +W  S  TS   R+PR  R
Sbjct: 273 SPPARRRSRSTRPTSWPRSRPTSKPKRLPRRRR 305


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 518 DVRPATSRTKPANWSLSLYTSS 453
           D +P T R  P NW  + Y S+
Sbjct: 147 DPKPGTERDPPNNWVAAWYGSA 168


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 156  PKQPPETISASLGPTVWMLPILNPFTVT 73
            P QPPET++ +    + + P + P T T
Sbjct: 1471 PVQPPETLTPAGSVAITVEPSVPPATTT 1498


>AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = -3

Query: 189 HPPTMVRFVVGPKQPPETISASLGPTVWMLPILNPFTVTF 70
           H  T  +  V PK    T + ++ PT    P   P   TF
Sbjct: 112 HTVTRTKATVAPKSTTTTTTTTVKPTTTTPPPCPPTLTTF 151


>AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = -3

Query: 189 HPPTMVRFVVGPKQPPETISASLGPTVWMLPILNPFTVTF 70
           H  T  +  V PK    T + ++ PT    P   P   TF
Sbjct: 112 HTVTRTKATVAPKSTTTTTTTTVKPTTTTPPPCPPTLTTF 151


>AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = -3

Query: 189 HPPTMVRFVVGPKQPPETISASLGPTVWMLPILNPFTVTF 70
           H  T  +  V PK    T + ++ PT    P   P   TF
Sbjct: 112 HTVTRTKATVAPKSTTTTTTTTVKPTTTTPPPCPPTLTTF 151


>AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = -3

Query: 189 HPPTMVRFVVGPKQPPETISASLGPTVWMLPILNPFTVTF 70
           H  T  +  V PK    T + ++ PT    P   P   TF
Sbjct: 112 HTITRTKATVAPKSTTTTTTTTVKPTTTTPPPCPPTLTTF 151


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +3

Query: 366  PGQDRQRD*DDCPANVGGSFASYSRNSYSRRGVQRQGPIRGLG 494
            PGQ            +GG  A+  R+S +  G  RQ    GLG
Sbjct: 1154 PGQQPSPGSRSYNGQMGGGGANRKRSSATNNGGGRQSSNNGLG 1196


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 895,880
Number of Sequences: 2352
Number of extensions: 21134
Number of successful extensions: 50
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)