Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1027
         (770 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   1.8  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    24   1.8  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   1.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.5  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   5.5  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               22   7.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   7.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   9.6  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   9.6  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 134 IVSGGCFGPTTKRTIVGGWAWAW 202
           IV+G    PT    + GG AW+W
Sbjct: 153 IVNGKRVPPTNWVGVFGGSAWSW 175


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 156 PKQPPETISASLGPTVWMLPILNPFTVTF 70
           P +PP+ +  +L    W+   +NPF   F
Sbjct: 333 PVEPPDILMPALTWLGWINSAINPFIYAF 361


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 134 IVSGGCFGPTTKRTIVGGWAWAW 202
           IV+G    PT    + GG AW+W
Sbjct: 153 IVNGKRVPPTNWVGVFGGSAWSW 175


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = -2

Query: 247 CHHFKGYTLDVRNQTPGPCP 188
           CH   GY  DV  Q    CP
Sbjct: 247 CHCKPGYQADVEKQECTECP 266


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 643 LWLTEMLVLGKRNVRKTQWTSNIRWTPK 726
           L+ +E   LGK     ++W S  R  PK
Sbjct: 527 LYFSEFAYLGKPTKEDSEWPSYSRDEPK 554


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 19  IKQVCYRFSCEVQCVYRESHCKRIQNGQ 102
           IK+    +SC + C   +SH   IQN +
Sbjct: 68  IKKYLTNYSCFITCALEKSHI--IQNDE 93


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 14/57 (24%), Positives = 28/57 (49%)
 Frame = +1

Query: 199 LVSGYGRPTYIP*SDDIEPMCEYVETAQGVPLTVTGVAQCKIMNEDELLTTACEQFL 369
           +VS Y   +Y+   + +E     +E  +G+  T +  + C  ++ DE+  +   QFL
Sbjct: 289 VVSDYSDYSYL--DEKLERNDLDLEKYEGISSTPSQASSCSCLDCDEIRESLDTQFL 343


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/26 (34%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -3

Query: 456 FYCKSSENSSQMTLQRL-QDSHLNLF 382
           + C+SS+NS    +QR     +LN++
Sbjct: 621 YMCQSSKNSENSIMQRASMKENLNVY 646


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 640 TPTSASLFTLAVCDF 596
           TP++  +  LA+CDF
Sbjct: 81  TPSNMFVVNLAICDF 95


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,166
Number of Sequences: 438
Number of extensions: 5625
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)