Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1024X
         (513 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023929-1|ABB36433.1|  352|Drosophila melanogaster RE60807p pro...    38   0.011
AL023874-4|CAA19648.1|  352|Drosophila melanogaster EG:100G10.3 ...    38   0.011
AJ344147-1|CAC82992.1|  352|Drosophila melanogaster eIF2B-beta p...    38   0.011
AF289101-1|AAG38015.1|  352|Drosophila melanogaster eukaryotic i...    38   0.011
AE014298-446|AAF45809.1|  352|Drosophila melanogaster CG2677-PA ...    38   0.011
AY069543-1|AAL39688.1|  602|Drosophila melanogaster LD26991p pro...    31   1.2  
AE013599-3299|AAF46779.3|  637|Drosophila melanogaster CG9304-PA...    31   1.2  
AY095201-1|AAM12294.1|  428|Drosophila melanogaster RE34120p pro...    29   3.7  
AF096272-1|AAC72375.1|  428|Drosophila melanogaster Sam50 protein.     29   3.7  
AE013599-2476|AAM70877.1|  394|Drosophila melanogaster CG4816-PC...    29   3.7  
AE013599-2475|AAM70876.1|  428|Drosophila melanogaster CG4816-PB...    29   3.7  
AE013599-2474|AAF57857.1|  428|Drosophila melanogaster CG4816-PA...    29   3.7  
U18298-1|AAA57340.1|  875|Drosophila melanogaster CDC27Dm protein.     28   6.5  
BT021947-1|AAX51652.1|  900|Drosophila melanogaster LD12661p pro...    28   6.5  
AE014296-1216|AAF50592.1|  900|Drosophila melanogaster CG8610-PA...    28   6.5  
AE013599-3461|AAF46899.2| 1218|Drosophila melanogaster CG3536-PA...    28   6.5  
BT011052-1|AAR31123.1|  730|Drosophila melanogaster RE45331p pro...    28   8.5  
AY271259-1|AAQ01726.1|  730|Drosophila melanogaster MITF protein.      28   8.5  
AE014135-211|ABC65835.1|  730|Drosophila melanogaster CG17469-PB...    28   8.5  
AE014135-210|ABC65834.1|  730|Drosophila melanogaster CG17469-PA...    28   8.5  

>BT023929-1|ABB36433.1|  352|Drosophila melanogaster RE60807p
           protein.
          Length = 352

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +1

Query: 328 SLQGLVLATPARH-SIVPSTDQD-LREPIRDHIAELRTXXXTMRSSITSQAREHVRADEV 501
           SL  LV  T   + S+  S  Q  LRE + DH+ E+ T   T   +I  QA EH+ + E+
Sbjct: 105 SLHKLVTQTSESNVSVDYSVPQHGLREALLDHLQEVETELETSSENICVQAEEHIHSSEI 164

Query: 502 LLS 510
           +L+
Sbjct: 165 ILT 167


>AL023874-4|CAA19648.1|  352|Drosophila melanogaster EG:100G10.3
           protein.
          Length = 352

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +1

Query: 328 SLQGLVLATPARH-SIVPSTDQD-LREPIRDHIAELRTXXXTMRSSITSQAREHVRADEV 501
           SL  LV  T   + S+  S  Q  LRE + DH+ E+ T   T   +I  QA EH+ + E+
Sbjct: 105 SLHKLVTQTSESNVSVDYSVPQHGLREALLDHLQEVETELETSSENICVQAEEHIHSSEI 164

Query: 502 LLS 510
           +L+
Sbjct: 165 ILT 167


>AJ344147-1|CAC82992.1|  352|Drosophila melanogaster eIF2B-beta
           protein protein.
          Length = 352

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +1

Query: 328 SLQGLVLATPARH-SIVPSTDQD-LREPIRDHIAELRTXXXTMRSSITSQAREHVRADEV 501
           SL  LV  T   + S+  S  Q  LRE + DH+ E+ T   T   +I  QA EH+ + E+
Sbjct: 105 SLHKLVTQTSESNVSVDYSVPQHGLREALLDHLQEVETELETSSENICVQAEEHIHSSEI 164

Query: 502 LLS 510
           +L+
Sbjct: 165 ILT 167


>AF289101-1|AAG38015.1|  352|Drosophila melanogaster eukaryotic
           initiation factor eIF2Bbeta subunit protein.
          Length = 352

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +1

Query: 328 SLQGLVLATPARH-SIVPSTDQD-LREPIRDHIAELRTXXXTMRSSITSQAREHVRADEV 501
           SL  LV  T   + S+  S  Q  LRE + DH+ E+ T   T   +I  QA EH+ + E+
Sbjct: 105 SLHKLVTQTSESNVSVDYSVPQHGLREALLDHLQEVETELETSSENICVQAEEHIHSSEI 164

Query: 502 LLS 510
           +L+
Sbjct: 165 ILT 167


>AE014298-446|AAF45809.1|  352|Drosophila melanogaster CG2677-PA
           protein.
          Length = 352

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +1

Query: 328 SLQGLVLATPARH-SIVPSTDQD-LREPIRDHIAELRTXXXTMRSSITSQAREHVRADEV 501
           SL  LV  T   + S+  S  Q  LRE + DH+ E+ T   T   +I  QA EH+ + E+
Sbjct: 105 SLHKLVTQTSESNVSVDYSVPQHGLREALLDHLQEVETELETSSENICVQAEEHIHSSEI 164

Query: 502 LLS 510
           +L+
Sbjct: 165 ILT 167


>AY069543-1|AAL39688.1|  602|Drosophila melanogaster LD26991p
           protein.
          Length = 602

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 31/95 (32%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
 Frame = +1

Query: 157 CNSTGTLWSPPCGRSSYQLKFTTGAGSDQHD*--EVLRAIRDENRXSVDQXQSGEGVGES 330
           C  TG LW    G+    L  T  AG D+ D   E    +R+  R   +       VG  
Sbjct: 501 CVMTGLLWPHRAGQYLL-LAGTKYAGMDELDEFNEAPHIVRERERRR-NSPPDEIAVGTG 558

Query: 331 LQGLVLATPARHSIVPSTDQDLREPIRDHIAELRT 435
            +G+VL+T   HS+      DL E   D  AEL T
Sbjct: 559 SRGMVLSTSIPHSLNGDACNDLLE-AEDLDAELLT 592


>AE013599-3299|AAF46779.3|  637|Drosophila melanogaster CG9304-PA
           protein.
          Length = 637

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 31/95 (32%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
 Frame = +1

Query: 157 CNSTGTLWSPPCGRSSYQLKFTTGAGSDQHD*--EVLRAIRDENRXSVDQXQSGEGVGES 330
           C  TG LW    G+    L  T  AG D+ D   E    +R+  R   +       VG  
Sbjct: 536 CVMTGLLWPHRAGQYLL-LAGTKYAGMDELDEFNEAPHIVRERERRR-NSPPDEIAVGTG 593

Query: 331 LQGLVLATPARHSIVPSTDQDLREPIRDHIAELRT 435
            +G+VL+T   HS+      DL E   D  AEL T
Sbjct: 594 SRGMVLSTSIPHSLNGDACNDLLE-AEDLDAELLT 627


>AY095201-1|AAM12294.1|  428|Drosophila melanogaster RE34120p
           protein.
          Length = 428

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 342 GSGDSGPAQHRAFNGSGLEGTYKRSH 419
           G G  G +Q  A  GSGL   + RSH
Sbjct: 400 GLGTGGASQSNAIGGSGLSSNHNRSH 425


>AF096272-1|AAC72375.1|  428|Drosophila melanogaster Sam50 protein.
          Length = 428

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 342 GSGDSGPAQHRAFNGSGLEGTYKRSH 419
           G G  G +Q  A  GSGL   + RSH
Sbjct: 400 GLGTGGASQSNAIGGSGLSSNHNRSH 425


>AE013599-2476|AAM70877.1|  394|Drosophila melanogaster CG4816-PC,
           isoform C protein.
          Length = 394

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 342 GSGDSGPAQHRAFNGSGLEGTYKRSH 419
           G G  G +Q  A  GSGL   + RSH
Sbjct: 366 GLGTGGASQSNAIGGSGLSSNHNRSH 391


>AE013599-2475|AAM70876.1|  428|Drosophila melanogaster CG4816-PB,
           isoform B protein.
          Length = 428

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 342 GSGDSGPAQHRAFNGSGLEGTYKRSH 419
           G G  G +Q  A  GSGL   + RSH
Sbjct: 400 GLGTGGASQSNAIGGSGLSSNHNRSH 425


>AE013599-2474|AAF57857.1|  428|Drosophila melanogaster CG4816-PA,
           isoform A protein.
          Length = 428

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 342 GSGDSGPAQHRAFNGSGLEGTYKRSH 419
           G G  G +Q  A  GSGL   + RSH
Sbjct: 400 GLGTGGASQSNAIGGSGLSSNHNRSH 425


>U18298-1|AAA57340.1|  875|Drosophila melanogaster CDC27Dm protein.
          Length = 875

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 18/64 (28%), Positives = 28/64 (43%)
 Frame = +2

Query: 8   LESLDIELSEKHIETVGKFVADIRNNKLSGSEQIAEATLTLVEKIISESNATARELCGVL 187
           +E     LSEK  E V    +   NN  SG    AE    L+   ++ +   A +L G+ 
Sbjct: 474 IEDKSHHLSEKRKEKVETITSSGANNN-SGGRSAAEEAKVLLNNSLNNAQTMAHQLMGLK 532

Query: 188 RAAA 199
           + +A
Sbjct: 533 KQSA 536


>BT021947-1|AAX51652.1|  900|Drosophila melanogaster LD12661p
           protein.
          Length = 900

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 18/64 (28%), Positives = 28/64 (43%)
 Frame = +2

Query: 8   LESLDIELSEKHIETVGKFVADIRNNKLSGSEQIAEATLTLVEKIISESNATARELCGVL 187
           +E     LSEK  E V    +   NN  SG    AE    L+   ++ +   A +L G+ 
Sbjct: 474 IEDKSHHLSEKRKEKVETITSSGANNN-SGGRSAAEEAKVLLNNSLNNAQTMAHQLMGLK 532

Query: 188 RAAA 199
           + +A
Sbjct: 533 KQSA 536


>AE014296-1216|AAF50592.1|  900|Drosophila melanogaster CG8610-PA
           protein.
          Length = 900

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 18/64 (28%), Positives = 28/64 (43%)
 Frame = +2

Query: 8   LESLDIELSEKHIETVGKFVADIRNNKLSGSEQIAEATLTLVEKIISESNATARELCGVL 187
           +E     LSEK  E V    +   NN  SG    AE    L+   ++ +   A +L G+ 
Sbjct: 474 IEDKSHHLSEKRKEKVETITSSGANNN-SGGRSAAEEAKVLLNNSLNNAQTMAHQLMGLK 532

Query: 188 RAAA 199
           + +A
Sbjct: 533 KQSA 536


>AE013599-3461|AAF46899.2| 1218|Drosophila melanogaster CG3536-PA
           protein.
          Length = 1218

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -3

Query: 361 GPESPEPDLGDSLLHPHHSGTG 296
           GP  P P  G    HPHH G G
Sbjct: 444 GPGGPGPPHGGHPHHPHHGGAG 465


>BT011052-1|AAR31123.1|  730|Drosophila melanogaster RE45331p
           protein.
          Length = 730

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = -1

Query: 231 SSSGKLELIRRAAARRTPQSSRAVALDSLIIFSTSVSVASAICSEPDNL 85
           SSSG +  IR ++   + QS+ A    S+   +TSVS   +  S+PD++
Sbjct: 310 SSSGIVNSIRISSTSSSLQSTSAPISPSVSSVATSVSELPSFDSDPDDI 358


>AY271259-1|AAQ01726.1|  730|Drosophila melanogaster MITF protein.
          Length = 730

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = -1

Query: 231 SSSGKLELIRRAAARRTPQSSRAVALDSLIIFSTSVSVASAICSEPDNL 85
           SSSG +  IR ++   + QS+ A    S+   +TSVS   +  S+PD++
Sbjct: 310 SSSGIVNSIRISSTSSSLQSTSAPISPSVSSVATSVSELPSFDSDPDDI 358


>AE014135-211|ABC65835.1|  730|Drosophila melanogaster CG17469-PB,
           isoform B protein.
          Length = 730

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = -1

Query: 231 SSSGKLELIRRAAARRTPQSSRAVALDSLIIFSTSVSVASAICSEPDNL 85
           SSSG +  IR ++   + QS+ A    S+   +TSVS   +  S+PD++
Sbjct: 310 SSSGIVNSIRISSTSSSLQSTSAPISPSVSSVATSVSELPSFDSDPDDI 358


>AE014135-210|ABC65834.1|  730|Drosophila melanogaster CG17469-PA,
           isoform A protein.
          Length = 730

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = -1

Query: 231 SSSGKLELIRRAAARRTPQSSRAVALDSLIIFSTSVSVASAICSEPDNL 85
           SSSG +  IR ++   + QS+ A    S+   +TSVS   +  S+PD++
Sbjct: 310 SSSGIVNSIRISSTSSSLQSTSAPISPSVSSVATSVSELPSFDSDPDDI 358


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,586,368
Number of Sequences: 53049
Number of extensions: 460786
Number of successful extensions: 1381
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1379
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)