Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1022
         (395 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    25   0.27 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   1.1  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    23   1.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   5.9  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    21   5.9  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    20   7.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    20   7.7  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    20   7.7  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.27
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +1

Query: 28  VWSLLRHLTVKFHCISLVFGFRESQTQLKLLLFGDYIVSNERS-YLCLPAYKFELTFTPS 204
           V +L R LT     ++ +FG+        +L+    I S+  S Y C+  Y+F   FT S
Sbjct: 206 VGTLYRILTTMMEMVNDIFGWT------LILILAKCITSSLSSLYTCIAGYEFNANFTIS 259

Query: 205 RTL 213
             L
Sbjct: 260 YIL 262


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +1

Query: 211 LKN*H*STLVVIIDWREGVL**SKM 285
           LKN +  TLV I  W EG +  SKM
Sbjct: 87  LKNPNLKTLVAIGGWNEGSVNYSKM 111


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -1

Query: 299 ILHIYIFDYHK 267
           +LHI+IFD H+
Sbjct: 85  VLHIHIFDLHR 95


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 178 CMQVSIDSFVR*KQYNHQKVKV 113
           C Q    +  + +Q+NH KV +
Sbjct: 204 CKQCDFVAITKLEQWNHSKVHI 225


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 299 ILHIYIFDYHKTP 261
           I H++I+D H  P
Sbjct: 103 ITHLHIYDLHHNP 115


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 250 QLLRLMCFSASFLTFSMA*KLTQICMQVSID 158
           QLL+      SF+ FS+  ++  + M +S D
Sbjct: 141 QLLKRSYLIISFVLFSLLARVPVMLMTISAD 171


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -2

Query: 250 QLLRLMCFSASFLTFSMA*KLTQICMQVSID 158
           QLL+      SF+ FS+  ++  + M +S D
Sbjct: 141 QLLKRSYLIISFVLFSLLARVPVMLMTISAD 171


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 20.2 bits (40), Expect = 7.7
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -1

Query: 299 ILHIYIFDYHKTP 261
           ++H++I+D H  P
Sbjct: 85  MVHLHIYDMHHNP 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,265
Number of Sequences: 336
Number of extensions: 1309
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8435920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)